RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 BATF2Q8N1L9 274 aa11.07□□□□□ -0.64
DDX55-206ENST00000539934 ARHGEF39Q8N4T4 335 aa11.07□□□□□ -0.64
DDX55-206ENST00000539934 WFDC6Q9BQY6 131 aa11.07□□□□□ -0.64
DDX55-206ENST00000539934 EXOSC4Q9NPD3 245 aaKnown RBP11.07□□□□□ -0.64
DDX55-206ENST00000539934 FLVCR2Q9UPI3 526 aa11.07□□□□□ -0.64
DDX55-206ENST00000539934 ANKRD61A6NGH8 418 aa11.07□□□□□ -0.64
DDX55-206ENST00000539934 M0QXV9 152 aa11.07□□□□□ -0.64
DDX55-206ENST00000539934 FOXS1O43638 330 aa11.07□□□□□ -0.64
DDX55-206ENST00000539934 ANKRD34CP0C6C1 535 aa11.07□□□□□ -0.64
DDX55-206ENST00000539934 MTNR1BP49286 362 aa11.07□□□□□ -0.64
DDX55-206ENST00000539934 ARL4DP49703 201 aa11.07□□□□□ -0.64
DDX55-206ENST00000539934 PSMA6P60900 246 aaKnown RBP11.07□□□□□ -0.64
DDX55-206ENST00000539934 RPL32P62910 135 aaKnown RBP11.07□□□□□ -0.64
DDX55-206ENST00000539934 EGR4Q05215 589 aa11.07□□□□□ -0.64
DDX55-206ENST00000539934 PRICKLE4Q2TBC4 344 aa11.07□□□□□ -0.64
DDX55-206ENST00000539934 AMZ1Q400G9 498 aa11.07□□□□□ -0.64
DDX55-206ENST00000539934 NECAP1Q8NC96 275 aa11.07□□□□□ -0.64
DDX55-206ENST00000539934 SLC7A13Q8TCU3 470 aa11.07□□□□□ -0.64
DDX55-206ENST00000539934 MRAP2Q96G30 205 aa11.07□□□□□ -0.64
DDX55-206ENST00000539934 OR5AC2Q9NZP5 309 aa11.07□□□□□ -0.64
DDX55-206ENST00000539934 MRPL27Q9P0M9 148 aaKnown RBP11.07□□□□□ -0.64
DDX55-206ENST00000539934 ONECUT1Q9UBC0 465 aa11.07□□□□□ -0.64
DDX55-206ENST00000539934 KCNE5Q9UJ90 142 aa11.07□□□□□ -0.64
DDX55-206ENST00000539934 POLR3KQ9Y2Y1 108 aaPredicted RBP11.07□□□□□ -0.64
DDX55-206ENST00000539934 UNC13CQ8NB66 2214 aa11.06□□□□□ -0.64
DDX55-206ENST00000539934 FXYD6-FXYD2A0A087WZ82 144 aa11.06□□□□□ -0.64
DDX55-206ENST00000539934 TRBV4-1A0A0J9YWV2 114 aa11.06□□□□□ -0.64
DDX55-206ENST00000539934 hCG_38984A0A1B0GV85 526 aa11.06□□□□□ -0.64
DDX55-206ENST00000539934 KANTRA0A1W2PQU2 76 aa11.06□□□□□ -0.64
DDX55-206ENST00000539934 ARRDC5A6NEK1 342 aa11.06□□□□□ -0.64
DDX55-206ENST00000539934 SHISA8B8ZZ34 492 aa11.06□□□□□ -0.64
DDX55-206ENST00000539934 BCL2L11O43521 198 aa11.06□□□□□ -0.64
DDX55-206ENST00000539934 DUX1O43812 170 aa11.06□□□□□ -0.64
DDX55-206ENST00000539934 ACP2P11117 423 aa11.06□□□□□ -0.64
DDX55-206ENST00000539934 ELAVL4P26378 380 aaKnown RBP11.06□□□□□ -0.64
DDX55-206ENST00000539934 AGTR1P30556 359 aa11.06□□□□□ -0.64
DDX55-206ENST00000539934 OTX2P32243 289 aa11.06□□□□□ -0.64
DDX55-206ENST00000539934 AVPR1BP47901 424 aa11.06□□□□□ -0.64
DDX55-206ENST00000539934 SMIM11AP58511 58 aa11.06□□□□□ -0.64
DDX55-206ENST00000539934 ZFP36L1Q07352 338 aaKnown RBP11.06□□□□□ -0.64
DDX55-206ENST00000539934 FAM53BQ14153 422 aa11.06□□□□□ -0.64
DDX55-206ENST00000539934 BATFQ16520 125 aa11.06□□□□□ -0.64
DDX55-206ENST00000539934 DUSP5Q16690 384 aa11.06□□□□□ -0.64
DDX55-206ENST00000539934 MBOAT2Q6ZWT7 520 aa11.06□□□□□ -0.64
DDX55-206ENST00000539934 KCNRGQ8N5I3 272 aa11.06□□□□□ -0.64
DDX55-206ENST00000539934 METTL27Q8N6F8 245 aaPredicted RBP11.06□□□□□ -0.64
DDX55-206ENST00000539934 BOLLQ8N9W6 283 aaKnown RBP11.06□□□□□ -0.64
DDX55-206ENST00000539934 OR52L2PQ8NGH6 319 aa11.06□□□□□ -0.64
DDX55-206ENST00000539934 OR6T1Q8NGN1 323 aa11.06□□□□□ -0.64
DDX55-206ENST00000539934 MOB3AQ96BX8 217 aa11.06□□□□□ -0.64
DDX55-206ENST00000539934 MMABQ96EY8 250 aaPredicted RBP11.06□□□□□ -0.64
DDX55-206ENST00000539934 FXYD6Q9H0Q3 95 aa11.06□□□□□ -0.64
DDX55-206ENST00000539934 CGGBP1Q9UFW8 167 aaPredicted RBP11.06□□□□□ -0.64
DDX55-206ENST00000539934 VAX2Q9UIW0 290 aa11.06□□□□□ -0.64
DDX55-206ENST00000539934 JPT1Q9UK76 154 aa11.06□□□□□ -0.64
DDX55-206ENST00000539934 SRPK3Q9UPE1 567 aa11.06□□□□□ -0.64
DDX55-206ENST00000539934 WDR45Q9Y484 360 aa11.06□□□□□ -0.64
DDX55-206ENST00000539934 DSPPQ9NZW4 1301 aa11.06□□□□□ -0.64
DDX55-206ENST00000539934 IGHV1OR21-1A0A087WYE8 117 aa11.05□□□□□ -0.64
DDX55-206ENST00000539934 SNRPGP15A8MWD9 76 aa11.05□□□□□ -0.64
DDX55-206ENST00000539934 RNASEK-C17orf49H0YIS7 233 aa11.05□□□□□ -0.64
DDX55-206ENST00000539934 PDE6DO43924 150 aa11.05□□□□□ -0.64
DDX55-206ENST00000539934 FCMRO60667 390 aa11.05□□□□□ -0.64
DDX55-206ENST00000539934 CT62P0C5K7 136 aa11.05□□□□□ -0.64
DDX55-206ENST00000539934 CCKARP32238 428 aa11.05□□□□□ -0.64
DDX55-206ENST00000539934 SOX18P35713 384 aa11.05□□□□□ -0.64
DDX55-206ENST00000539934 RFX3P48380 749 aa11.05□□□□□ -0.64
DDX55-206ENST00000539934 EFNB1P98172 346 aa11.05□□□□□ -0.64
DDX55-206ENST00000539934 EXOSC7Q15024 291 aaKnown RBP11.05□□□□□ -0.64
DDX55-206ENST00000539934 COA6Q5JTJ3 125 aaKnown RBP11.05□□□□□ -0.64
DDX55-206ENST00000539934 FHL5Q5TD97 284 aa11.05□□□□□ -0.64
DDX55-206ENST00000539934 Q6ZPB1 254 aaPredicted RBP11.05□□□□□ -0.64
DDX55-206ENST00000539934 CDRT4Q8N9R6 151 aa11.05□□□□□ -0.64
DDX55-206ENST00000539934 OR52L1Q8NGH7 329 aa11.05□□□□□ -0.64
DDX55-206ENST00000539934 OR52P1PQ8NH57 321 aa11.05□□□□□ -0.64
DDX55-206ENST00000539934 ZG16BQ96DA0 208 aa11.05□□□□□ -0.64
DDX55-206ENST00000539934 SLC17A5Q9NRA2 495 aa11.05□□□□□ -0.64
DDX55-206ENST00000539934 RP1L1Q8IWN7 2480 aaPredicted RBP11.05□□□□□ -0.64
DDX55-206ENST00000539934 ZNF814B7Z6K7 855 aa11.05□□□□□ -0.64
DDX55-206ENST00000539934 FAM157AC9JC47 383 aa11.05□□□□□ -0.64
DDX55-206ENST00000539934 K7ENP7 123 aa11.05□□□□□ -0.64
DDX55-206ENST00000539934 TNFSF13O75888 250 aa11.05□□□□□ -0.64
DDX55-206ENST00000539934 EPPINO95925 133 aa11.05□□□□□ -0.64
DDX55-206ENST00000539934 GASTP01350 101 aa11.05□□□□□ -0.64
DDX55-206ENST00000539934 THY1P04216 161 aa11.05□□□□□ -0.64
DDX55-206ENST00000539934 FAM87AP0C7U9 286 aa11.05□□□□□ -0.64
DDX55-206ENST00000539934 PGA3P0DJD8 388 aa11.05□□□□□ -0.64
DDX55-206ENST00000539934 OR10J1P30954 320 aa11.05□□□□□ -0.64
DDX55-206ENST00000539934 UCNP55089 124 aa11.05□□□□□ -0.64
DDX55-206ENST00000539934 PMPCAQ10713 525 aa11.05□□□□□ -0.64
DDX55-206ENST00000539934 ELFN2Q5R3F8 820 aa11.05□□□□□ -0.64
DDX55-206ENST00000539934 RTL6Q6ICC9 239 aa11.05□□□□□ -0.64
DDX55-206ENST00000539934 FRRS1Q6ZNA5 592 aa11.05□□□□□ -0.64
DDX55-206ENST00000539934 PLXDC1Q8IUK5 500 aa11.05□□□□□ -0.64
DDX55-206ENST00000539934 COX18Q8N8Q8 333 aa11.05□□□□□ -0.64
DDX55-206ENST00000539934 C1orf162Q8NEQ5 155 aaPredicted RBP11.05□□□□□ -0.64
DDX55-206ENST00000539934 PIK3IP1Q96FE7 263 aa11.05□□□□□ -0.64
DDX55-206ENST00000539934 PBDC1Q9BVG4 233 aa11.05□□□□□ -0.64
DDX55-206ENST00000539934 NUDT9Q9BW91 350 aa11.05□□□□□ -0.64
DDX55-206ENST00000539934 CHRNA10Q9GZZ6 450 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms