RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 DMRTC1Q5HYR2 192 aa12.24□□□□□ -0.45
USB1-203ENST00000539737 BTN2A1Q7KYR7 527 aa12.24□□□□□ -0.45
USB1-203ENST00000539737 VMO1Q7Z5L0 202 aa12.24□□□□□ -0.45
USB1-203ENST00000539737 ZSCAN4Q8NAM6 433 aaPredicted RBP12.24□□□□□ -0.45
USB1-203ENST00000539737 POC1AQ8NBT0 407 aa12.24□□□□□ -0.45
USB1-203ENST00000539737 ZNF485Q8NCK3 441 aa12.24□□□□□ -0.45
USB1-203ENST00000539737 CDCA4Q9BXL8 241 aa12.24□□□□□ -0.45
USB1-203ENST00000539737 CNTD2Q9H8S5 307 aa12.24□□□□□ -0.45
USB1-203ENST00000539737 SIRT7Q9NRC8 400 aa12.24□□□□□ -0.45
USB1-203ENST00000539737 RASL12Q9NYN1 266 aa12.24□□□□□ -0.45
USB1-203ENST00000539737 PCDHGB5Q9Y5G0 923 aa12.24□□□□□ -0.45
USB1-203ENST00000539737 AKR7A2O43488 359 aa12.23□□□□□ -0.45
USB1-203ENST00000539737 RHBDL1O75783 438 aa12.23□□□□□ -0.45
USB1-203ENST00000539737 MT-ND2P03891 347 aa12.23□□□□□ -0.45
USB1-203ENST00000539737 CSF1P09603 554 aa12.23□□□□□ -0.45
USB1-203ENST00000539737 ATF1P18846 271 aa12.23□□□□□ -0.45
USB1-203ENST00000539737 AZGP1P25311 298 aaKnown RBP12.23□□□□□ -0.45
USB1-203ENST00000539737 RBP2P50120 134 aa12.23□□□□□ -0.45
USB1-203ENST00000539737 ATP1B3P54709 279 aa12.23□□□□□ -0.45
USB1-203ENST00000539737 BDH1Q02338 343 aa12.23□□□□□ -0.45
USB1-203ENST00000539737 IL24Q13007 206 aa12.23□□□□□ -0.45
USB1-203ENST00000539737 RBM48Q5RL73 367 aaKnown RBP12.23□□□□□ -0.45
USB1-203ENST00000539737 STUMQ69YW2 141 aa12.23□□□□□ -0.45
USB1-203ENST00000539737 DMKNQ6E0U4 476 aaPredicted RBP12.23□□□□□ -0.45
USB1-203ENST00000539737 DHRS7BQ6IAN0 325 aaPredicted RBP12.23□□□□□ -0.45
USB1-203ENST00000539737 LHFPL2Q6ZUX7 228 aa12.23□□□□□ -0.45
USB1-203ENST00000539737 SERPINA12Q8IW75 414 aa12.23□□□□□ -0.45
USB1-203ENST00000539737 PARP16Q8N5Y8 322 aa12.23□□□□□ -0.45
USB1-203ENST00000539737 NANOGP1Q8N7R0 232 aa12.23□□□□□ -0.45
USB1-203ENST00000539737 OR5D14Q8NGL3 314 aa12.23□□□□□ -0.45
USB1-203ENST00000539737 OR13C9Q8NGT0 318 aa12.23□□□□□ -0.45
USB1-203ENST00000539737 TBC1D15Q8TC07 691 aa12.23□□□□□ -0.45
USB1-203ENST00000539737 OPALINQ96PE5 141 aa12.23□□□□□ -0.45
USB1-203ENST00000539737 CCL13Q99616 98 aa12.23□□□□□ -0.45
USB1-203ENST00000539737 DNTTIP1Q9H147 329 aa12.23□□□□□ -0.45
USB1-203ENST00000539737 ZCCHC4Q9H5U6 513 aa12.23□□□□□ -0.45
USB1-203ENST00000539737 NLKQ9UBE8 527 aa12.23□□□□□ -0.45
USB1-203ENST00000539737 ZNF281Q9Y2X9 895 aa12.23□□□□□ -0.45
USB1-203ENST00000539737 RGS10O43665 173 aa12.22□□□□□ -0.45
USB1-203ENST00000539737 SULT1B1O43704 296 aa12.22□□□□□ -0.45
USB1-203ENST00000539737 SYNGR1O43759 233 aa12.22□□□□□ -0.45
USB1-203ENST00000539737 NOS1APO75052 506 aaPredicted RBP12.22□□□□□ -0.45
USB1-203ENST00000539737 LALBAP00709 142 aa12.22□□□□□ -0.45
USB1-203ENST00000539737 PGA5P0DJD9 388 aa12.22□□□□□ -0.45
USB1-203ENST00000539737 SELLP14151 372 aa12.22□□□□□ -0.45
USB1-203ENST00000539737 CRHBPP24387 322 aa12.22□□□□□ -0.45
USB1-203ENST00000539737 GMFBP60983 142 aa12.22□□□□□ -0.45
USB1-203ENST00000539737 YIF1BQ5BJH7 314 aa12.22□□□□□ -0.45
USB1-203ENST00000539737 SAMD5Q5TGI4 173 aa12.22□□□□□ -0.45
USB1-203ENST00000539737 LDLRAD3Q86YD5 345 aa12.22□□□□□ -0.45
USB1-203ENST00000539737 C17orf50Q8WW18 174 aa12.22□□□□□ -0.45
USB1-203ENST00000539737 RGP1Q92546 391 aaPredicted RBP12.22□□□□□ -0.45
USB1-203ENST00000539737 CPNE2Q96FN4 548 aaPredicted RBP12.22□□□□□ -0.45
USB1-203ENST00000539737 MED30Q96HR3 178 aa12.22□□□□□ -0.45
USB1-203ENST00000539737 DMRTB1Q96MA1 342 aa12.22□□□□□ -0.45
USB1-203ENST00000539737 NRIP2Q9BQI9 281 aa12.22□□□□□ -0.45
USB1-203ENST00000539737 WDR13Q9H1Z4 485 aa12.22□□□□□ -0.45
USB1-203ENST00000539737 DUSP21Q9H596 190 aa12.22□□□□□ -0.45
USB1-203ENST00000539737 PAK1IP1Q9NWT1 392 aaPredicted RBP12.22□□□□□ -0.45
USB1-203ENST00000539737 ONECUT1Q9UBC0 465 aa12.22□□□□□ -0.45
USB1-203ENST00000539737 FAM96BQ9Y3D0 163 aa12.22□□□□□ -0.45
USB1-203ENST00000539737 KPTNQ9Y664 436 aa12.22□□□□□ -0.45
USB1-203ENST00000539737 SIRT4Q9Y6E7 314 aaPredicted RBP12.22□□□□□ -0.45
USB1-203ENST00000539737 IGKV1-9A0A0C4DH69 117 aa12.21□□□□□ -0.45
USB1-203ENST00000539737 PIN1P1O15428 100 aa12.21□□□□□ -0.45
USB1-203ENST00000539737 NXPH2O95156 264 aa12.21□□□□□ -0.45
USB1-203ENST00000539737 CYB5AP00167 134 aa12.21□□□□□ -0.45
USB1-203ENST00000539737 CD1AP06126 327 aa12.21□□□□□ -0.45
USB1-203ENST00000539737 ACAA1P09110 424 aaPredicted RBP12.21□□□□□ -0.45
USB1-203ENST00000539737 EEF1B2P24534 225 aaKnown RBP12.21□□□□□ -0.45
USB1-203ENST00000539737 MTCP1P56278 107 aa12.21□□□□□ -0.45
USB1-203ENST00000539737 ACSM1Q08AH1 577 aa12.21□□□□□ -0.45
USB1-203ENST00000539737 IKZF1Q13422 519 aa12.21□□□□□ -0.45
USB1-203ENST00000539737 C2orf68Q2NKX9 166 aa12.21□□□□□ -0.45
USB1-203ENST00000539737 OXLD1Q5BKU9 147 aa12.21□□□□□ -0.45
USB1-203ENST00000539737 C1orf122Q6ZSJ8 110 aa12.21□□□□□ -0.45
USB1-203ENST00000539737 CALHM1Q8IU99 346 aa12.21□□□□□ -0.45
USB1-203ENST00000539737 FAM216BQ8N7L0 139 aa12.21□□□□□ -0.45
USB1-203ENST00000539737 PPP1R35Q8TAP8 253 aa12.21□□□□□ -0.45
USB1-203ENST00000539737 H1FXQ92522 213 aaKnown RBP12.21□□□□□ -0.45
USB1-203ENST00000539737 THRSPQ92748 146 aa12.21□□□□□ -0.45
USB1-203ENST00000539737 GHSRQ92847 366 aa12.21□□□□□ -0.45
USB1-203ENST00000539737 PGLYRP3Q96LB9 341 aa12.21□□□□□ -0.45
USB1-203ENST00000539737 PPA2Q9H2U2 334 aa12.21□□□□□ -0.45
USB1-203ENST00000539737 RPUSD1Q9UJJ7 312 aaKnown RBP12.21□□□□□ -0.45
USB1-203ENST00000539737 DNAH9Q9NYC9 4486 aa12.21□□□□□ -0.46
USB1-203ENST00000539737 IGKV1-27A0A075B6S5 117 aa12.2□□□□□ -0.46
USB1-203ENST00000539737 BTBD17A6NE02 478 aa12.2□□□□□ -0.46
USB1-203ENST00000539737 OR2AT4A6NND4 320 aa12.2□□□□□ -0.46
USB1-203ENST00000539737 DENRO43583 198 aaKnown RBP12.2□□□□□ -0.46
USB1-203ENST00000539737 HCKP08631 526 aa12.2□□□□□ -0.46
USB1-203ENST00000539737 RAB3AP20336 220 aa12.2□□□□□ -0.46
USB1-203ENST00000539737 SOX2P48431 317 aa12.2□□□□□ -0.46
USB1-203ENST00000539737 POU3F4P49335 361 aa12.2□□□□□ -0.46
USB1-203ENST00000539737 PPP3R1P63098 170 aa12.2□□□□□ -0.46
USB1-203ENST00000539737 GUCA2AQ02747 115 aa12.2□□□□□ -0.46
USB1-203ENST00000539737 BLMHQ13867 455 aa12.2□□□□□ -0.46
USB1-203ENST00000539737 IRF3Q14653 427 aa12.2□□□□□ -0.46
USB1-203ENST00000539737 SPHARQ15513 63 aa12.2□□□□□ -0.46
USB1-203ENST00000539737 LY6EQ16553 131 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms