RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 LINC00596Q86U02 117 aa13.63□□□□□ -0.23
TRAF3-204ENST00000539721 BOLLQ8N9W6 283 aaKnown RBP13.63□□□□□ -0.23
TRAF3-204ENST00000539721 FCAMRQ8WWV6 532 aa13.63□□□□□ -0.23
TRAF3-204ENST00000539721 NEDD4LQ96PU5 975 aa13.63□□□□□ -0.23
TRAF3-204ENST00000539721 THAP7Q9BT49 309 aaPredicted RBP13.63□□□□□ -0.23
TRAF3-204ENST00000539721 PECRQ9BY49 303 aa13.63□□□□□ -0.23
TRAF3-204ENST00000539721 PLEKHJ1Q9NW61 149 aa13.63□□□□□ -0.23
TRAF3-204ENST00000539721 ZNF581Q9P0T4 197 aa13.63□□□□□ -0.23
TRAF3-204ENST00000539721 RNF7Q9UBF6 113 aa13.63□□□□□ -0.23
TRAF3-204ENST00000539721 RAI1Q7Z5J4 1906 aaPredicted RBP13.63□□□□□ -0.23
TRAF3-204ENST00000539721 DYSFO75923 2080 aa13.63□□□□□ -0.23
TRAF3-204ENST00000539721 MEIOCA2RUB1 952 aa13.62□□□□□ -0.23
TRAF3-204ENST00000539721 SRRM5B3KS81 715 aa13.62□□□□□ -0.23
TRAF3-204ENST00000539721 CD8AP01732 235 aa13.62□□□□□ -0.23
TRAF3-204ENST00000539721 GSTP1P09211 210 aaKnown RBP13.62□□□□□ -0.23
TRAF3-204ENST00000539721 CD3GP09693 182 aa13.62□□□□□ -0.23
TRAF3-204ENST00000539721 IRF2P14316 349 aa13.62□□□□□ -0.23
TRAF3-204ENST00000539721 EGR1P18146 543 aa13.62□□□□□ -0.23
TRAF3-204ENST00000539721 CFHR2P36980 270 aa13.62□□□□□ -0.23
TRAF3-204ENST00000539721 RBMXP38159 391 aaKnown RBP13.62□□□□□ -0.23
TRAF3-204ENST00000539721 INPP1P49441 399 aa13.62□□□□□ -0.23
TRAF3-204ENST00000539721 HOXA4Q00056 320 aaPredicted RBP13.62□□□□□ -0.23
TRAF3-204ENST00000539721 GUCA2AQ02747 115 aa13.62□□□□□ -0.23
TRAF3-204ENST00000539721 ARL6IP1Q15041 203 aa13.62□□□□□ -0.23
TRAF3-204ENST00000539721 ATAD3CQ5T2N8 411 aa13.62□□□□□ -0.23
TRAF3-204ENST00000539721 SP5Q6BEB4 398 aaPredicted RBP13.62□□□□□ -0.23
TRAF3-204ENST00000539721 C11orf71Q6IPW1 123 aa13.62□□□□□ -0.23
TRAF3-204ENST00000539721 ACP7Q6ZNF0 438 aa13.62□□□□□ -0.23
TRAF3-204ENST00000539721 C6orf201Q7Z4U5 140 aa13.62□□□□□ -0.23
TRAF3-204ENST00000539721 DTX2Q86UW9 622 aa13.62□□□□□ -0.23
TRAF3-204ENST00000539721 OR52I2Q8NH67 350 aa13.62□□□□□ -0.23
TRAF3-204ENST00000539721 Q8TCH9 128 aa13.62□□□□□ -0.23
TRAF3-204ENST00000539721 YIPF5Q969M3 257 aa13.62□□□□□ -0.23
TRAF3-204ENST00000539721 WDR13Q9H1Z4 485 aa13.62□□□□□ -0.23
TRAF3-204ENST00000539721 TREM2Q9NZC2 230 aa13.62□□□□□ -0.23
TRAF3-204ENST00000539721 ELF5Q9UKW6 265 aaPredicted RBP13.62□□□□□ -0.23
TRAF3-204ENST00000539721 A0A1W2PQ09 198 aa13.61□□□□□ -0.23
TRAF3-204ENST00000539721 FAM221AA4D161 298 aa13.61□□□□□ -0.23
TRAF3-204ENST00000539721 MFNGO00587 321 aa13.61□□□□□ -0.23
TRAF3-204ENST00000539721 PDCD6O75340 191 aa13.61□□□□□ -0.23
TRAF3-204ENST00000539721 CHATP28329 748 aa13.61□□□□□ -0.23
TRAF3-204ENST00000539721 TLE4Q04727 773 aa13.61□□□□□ -0.23
TRAF3-204ENST00000539721 SCN1BQ07699 218 aa13.61□□□□□ -0.23
TRAF3-204ENST00000539721 SMIM21Q3B7S5 101 aa13.61□□□□□ -0.23
TRAF3-204ENST00000539721 SPIN3Q5JUX0 258 aa13.61□□□□□ -0.23
TRAF3-204ENST00000539721 STEAP3Q658P3 488 aa13.61□□□□□ -0.23
TRAF3-204ENST00000539721 LYSMD2Q8IV50 215 aa13.61□□□□□ -0.23
TRAF3-204ENST00000539721 GCSAMQ8N6F7 178 aa13.61□□□□□ -0.23
TRAF3-204ENST00000539721 HPS1Q92902 700 aa13.61□□□□□ -0.23
TRAF3-204ENST00000539721 TRAF4Q9BUZ4 470 aaPredicted RBP13.61□□□□□ -0.23
TRAF3-204ENST00000539721 RASL12Q9NYN1 266 aa13.61□□□□□ -0.23
TRAF3-204ENST00000539721 HSF4Q9ULV5 492 aa13.61□□□□□ -0.23
TRAF3-204ENST00000539721 LAMP3Q9UQV4 416 aa13.61□□□□□ -0.23
TRAF3-204ENST00000539721 TANC2Q9HCD6 1990 aa13.61□□□□□ -0.23
TRAF3-204ENST00000539721 HRNRQ86YZ3 2850 aaPredicted RBP13.61□□□□□ -0.23
TRAF3-204ENST00000539721 LANCL1O43813 399 aa13.6□□□□□ -0.23
TRAF3-204ENST00000539721 CYB5R3P00387 301 aaPredicted RBP13.6□□□□□ -0.23
TRAF3-204ENST00000539721 MELTFP08582 738 aa13.6□□□□□ -0.23
TRAF3-204ENST00000539721 FUT3P21217 361 aa13.6□□□□□ -0.23
TRAF3-204ENST00000539721 GNG2P59768 71 aa13.6□□□□□ -0.23
TRAF3-204ENST00000539721 PNLIPRP3Q17RR3 467 aa13.6□□□□□ -0.23
TRAF3-204ENST00000539721 OLFML2AQ68BL7 652 aa13.6□□□□□ -0.23
TRAF3-204ENST00000539721 C19orf18Q8NEA5 215 aa13.6□□□□□ -0.23
TRAF3-204ENST00000539721 SEH1LQ96EE3 360 aa13.6□□□□□ -0.23
TRAF3-204ENST00000539721 CYYR1Q96J86 154 aa13.6□□□□□ -0.23
TRAF3-204ENST00000539721 SCPEP1Q9HB40 452 aa13.6□□□□□ -0.23
TRAF3-204ENST00000539721 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.6□□□□□ -0.23
TRAF3-204ENST00000539721 OR14J1Q9UGF5 321 aa13.6□□□□□ -0.23
TRAF3-204ENST00000539721 KCNK7Q9Y2U2 307 aa13.6□□□□□ -0.23
TRAF3-204ENST00000539721 MEIS3P1A6NDR6 274 aa13.6□□□□□ -0.23
TRAF3-204ENST00000539721 LRRC30A6NM36 301 aa13.6□□□□□ -0.23
TRAF3-204ENST00000539721 H3BUI4 141 aa13.6□□□□□ -0.23
TRAF3-204ENST00000539721 SULT1C2O00338 296 aa13.6□□□□□ -0.23
TRAF3-204ENST00000539721 LHBP01229 141 aa13.6□□□□□ -0.23
TRAF3-204ENST00000539721 HPXP02790 462 aa13.6□□□□□ -0.23
TRAF3-204ENST00000539721 ZNF44P15621 663 aa13.6□□□□□ -0.23
TRAF3-204ENST00000539721 ARFRP1Q13795 201 aa13.6□□□□□ -0.23
TRAF3-204ENST00000539721 ZNF146Q15072 292 aa13.6□□□□□ -0.23
TRAF3-204ENST00000539721 HACD4Q5VWC8 232 aa13.6□□□□□ -0.23
TRAF3-204ENST00000539721 BRICD5Q6PL45 260 aa13.6□□□□□ -0.23
TRAF3-204ENST00000539721 NUDCD2Q8WVJ2 157 aa13.6□□□□□ -0.23
TRAF3-204ENST00000539721 ST8SIA4Q92187 359 aa13.6□□□□□ -0.23
TRAF3-204ENST00000539721 TRIM63Q969Q1 353 aa13.6□□□□□ -0.23
TRAF3-204ENST00000539721 CACNG6Q9BXT2 260 aa13.6□□□□□ -0.23
TRAF3-204ENST00000539721 RAB1BQ9H0U4 201 aa13.6□□□□□ -0.23
TRAF3-204ENST00000539721 CLEC4MQ9H2X3 399 aaPredicted RBP13.6□□□□□ -0.23
TRAF3-204ENST00000539721 DNAJB11Q9UBS4 358 aa13.6□□□□□ -0.23
TRAF3-204ENST00000539721 GLS2Q9UI32 602 aa13.6□□□□□ -0.23
TRAF3-204ENST00000539721 NPTNQ9Y639 398 aa13.6□□□□□ -0.23
TRAF3-204ENST00000539721 SERPINE3A8MV23 424 aa13.59□□□□□ -0.23
TRAF3-204ENST00000539721 SH2D1BO14796 132 aa13.59□□□□□ -0.23
TRAF3-204ENST00000539721 DEGS1O15121 323 aa13.59□□□□□ -0.23
TRAF3-204ENST00000539721 KNG1P01042 644 aa13.59□□□□□ -0.23
TRAF3-204ENST00000539721 LPLP06858 475 aa13.59□□□□□ -0.23
TRAF3-204ENST00000539721 CD80P33681 288 aa13.59□□□□□ -0.23
TRAF3-204ENST00000539721 GDNFP39905 211 aa13.59□□□□□ -0.23
TRAF3-204ENST00000539721 ZNF57Q68EA5 555 aaPredicted RBP13.59□□□□□ -0.23
TRAF3-204ENST00000539721 Q6P435 159 aa13.59□□□□□ -0.23
TRAF3-204ENST00000539721 DNM1P46Q6ZS02 220 aa13.59□□□□□ -0.23
TRAF3-204ENST00000539721 TRAPPC6BQ86SZ2 158 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 83.9 ms