RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, human

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDB1-215	ENST00000539712	ZNF728	P0DKX0	622 aa		13.6	□□□□□ -0.23
DDB1-215	ENST00000539712	CALCB	P10092	127 aa		13.6	□□□□□ -0.23
DDB1-215	ENST00000539712	PRKACB	P22694	351 aa		13.6	□□□□□ -0.23
DDB1-215	ENST00000539712	COX7A1	P24310	79 aa		13.6	□□□□□ -0.23
DDB1-215	ENST00000539712	TGFBR2	P37173	567 aa		13.6	□□□□□ -0.23
DDB1-215	ENST00000539712	ATP1B3	P54709	279 aa		13.6	□□□□□ -0.23
DDB1-215	ENST00000539712	ACTA2	P62736	377 aa		13.6	□□□□□ -0.23
DDB1-215	ENST00000539712	ACTG2	P63267	376 aa		13.6	□□□□□ -0.23
DDB1-215	ENST00000539712	ZNF146	Q15072	292 aa		13.6	□□□□□ -0.23
DDB1-215	ENST00000539712	AANAT	Q16613	207 aa		13.6	□□□□□ -0.23
DDB1-215	ENST00000539712	DHRS7B	Q6IAN0	325 aa	Predicted RBP	13.6	□□□□□ -0.23
DDB1-215	ENST00000539712	SLC35E4	Q6ICL7	350 aa		13.6	□□□□□ -0.23
DDB1-215	ENST00000539712	LHFPL4	Q7Z7J7	247 aa		13.6	□□□□□ -0.23
DDB1-215	ENST00000539712	FAM58A	Q8N1B3	248 aa		13.6	□□□□□ -0.23
DDB1-215	ENST00000539712	OR52I1	Q8NGK6	324 aa		13.6	□□□□□ -0.23
DDB1-215	ENST00000539712	EMG1	Q92979	244 aa	Known RBP	13.6	□□□□□ -0.23
DDB1-215	ENST00000539712	SPSB1	Q96BD6	273 aa		13.6	□□□□□ -0.23
DDB1-215	ENST00000539712	BTBD17	A6NE02	478 aa		13.59	□□□□□ -0.23
DDB1-215	ENST00000539712	ODF3B	A8MYP8	253 aa		13.59	□□□□□ -0.23
DDB1-215	ENST00000539712	MPZL2	O60487	215 aa		13.59	□□□□□ -0.23
DDB1-215	ENST00000539712	WBP4	O75554	376 aa	Known RBP	13.59	□□□□□ -0.23
DDB1-215	ENST00000539712	ZFPL1	O95159	310 aa		13.59	□□□□□ -0.23
DDB1-215	ENST00000539712	LIMS3	P0CW19	117 aa		13.59	□□□□□ -0.23
DDB1-215	ENST00000539712	LIMS4	P0CW20	117 aa		13.59	□□□□□ -0.23
DDB1-215	ENST00000539712	POU3F4	P49335	361 aa		13.59	□□□□□ -0.23
DDB1-215	ENST00000539712	RAB40B	Q12829	278 aa		13.59	□□□□□ -0.23
DDB1-215	ENST00000539712	ASPHD2	Q6ICH7	369 aa		13.59	□□□□□ -0.23
DDB1-215	ENST00000539712	BRICD5	Q6PL45	260 aa		13.59	□□□□□ -0.23
DDB1-215	ENST00000539712	LHFPL2	Q6ZUX7	228 aa		13.59	□□□□□ -0.23
DDB1-215	ENST00000539712		Q8IYB0	196 aa		13.59	□□□□□ -0.23
DDB1-215	ENST00000539712	OR4S1	Q8NGB4	309 aa		13.59	□□□□□ -0.23
DDB1-215	ENST00000539712	RFT1	Q96AA3	541 aa		13.59	□□□□□ -0.23
DDB1-215	ENST00000539712	OPALIN	Q96PE5	141 aa		13.59	□□□□□ -0.23
DDB1-215	ENST00000539712	SPACA5	Q96QH8	159 aa		13.59	□□□□□ -0.23
DDB1-215	ENST00000539712	PPA2	Q9H2U2	334 aa		13.59	□□□□□ -0.23
DDB1-215	ENST00000539712	HMG20A	Q9NP66	347 aa		13.59	□□□□□ -0.23
DDB1-215	ENST00000539712	TG	P01266	2768 aa		13.58	□□□□□ -0.24
DDB1-215	ENST00000539712	hCG_1809904	A0A1W2PP81	198 aa		13.58	□□□□□ -0.24
DDB1-215	ENST00000539712		A0A1W2PPE2	198 aa		13.58	□□□□□ -0.24
DDB1-215	ENST00000539712		A0A1W2PR64	198 aa		13.58	□□□□□ -0.24
DDB1-215	ENST00000539712		A0A1W2PRV1	198 aa		13.58	□□□□□ -0.24
DDB1-215	ENST00000539712	FADS2	O95864	444 aa	Known RBP	13.58	□□□□□ -0.24
DDB1-215	ENST00000539712	RBP4	P02753	201 aa		13.58	□□□□□ -0.24
DDB1-215	ENST00000539712	IGHV1-8	P0DP01	117 aa		13.58	□□□□□ -0.24
DDB1-215	ENST00000539712	ZNF20	P17024	532 aa		13.58	□□□□□ -0.24
DDB1-215	ENST00000539712	OR3A1	P47881	315 aa		13.58	□□□□□ -0.24
DDB1-215	ENST00000539712	EDDM3B	P56851	147 aa		13.58	□□□□□ -0.24
DDB1-215	ENST00000539712	MEF2C	Q06413	473 aa	Predicted RBP	13.58	□□□□□ -0.24
DDB1-215	ENST00000539712	SMN1	Q16637	294 aa	Known RBP	13.58	□□□□□ -0.24
DDB1-215	ENST00000539712	LRRC75B	Q2VPJ9	315 aa		13.58	□□□□□ -0.24
DDB1-215	ENST00000539712	GDPD3	Q7L5L3	318 aa		13.58	□□□□□ -0.24
DDB1-215	ENST00000539712	ZNF676	Q8N7Q3	588 aa		13.58	□□□□□ -0.24
DDB1-215	ENST00000539712	TPRX1	Q8N7U7	411 aa		13.58	□□□□□ -0.24
DDB1-215	ENST00000539712	OR11H6	Q8NGC7	330 aa		13.58	□□□□□ -0.24
DDB1-215	ENST00000539712	OR13C3	Q8NGS6	347 aa		13.58	□□□□□ -0.24
DDB1-215	ENST00000539712	OR13C9	Q8NGT0	318 aa		13.58	□□□□□ -0.24
DDB1-215	ENST00000539712		Q96MT0	163 aa		13.58	□□□□□ -0.24
DDB1-215	ENST00000539712	CHST6	Q9GZX3	395 aa		13.58	□□□□□ -0.24
DDB1-215	ENST00000539712	INPP5E	Q9NRR6	644 aa		13.58	□□□□□ -0.24
DDB1-215	ENST00000539712	PRKDC	P78527	4128 aa	Known RBP	13.57	□□□□□ -0.24
DDB1-215	ENST00000539712	VGLL3	A8MV65	326 aa		13.57	□□□□□ -0.24
DDB1-215	ENST00000539712	KCNAB3	O43448	404 aa		13.57	□□□□□ -0.24
DDB1-215	ENST00000539712	CHST1	O43916	411 aa		13.57	□□□□□ -0.24
DDB1-215	ENST00000539712	KDM4B	O94953	1096 aa		13.57	□□□□□ -0.24
DDB1-215	ENST00000539712	ALX3	O95076	343 aa		13.57	□□□□□ -0.24
DDB1-215	ENST00000539712	EDDM3A	Q14507	147 aa		13.57	□□□□□ -0.24
DDB1-215	ENST00000539712	LY6E	Q16553	131 aa		13.57	□□□□□ -0.24
DDB1-215	ENST00000539712	ZNF626	Q68DY1	528 aa		13.57	□□□□□ -0.24
DDB1-215	ENST00000539712	PARP16	Q8N5Y8	322 aa		13.57	□□□□□ -0.24
DDB1-215	ENST00000539712	RGP1	Q92546	391 aa	Predicted RBP	13.57	□□□□□ -0.24
DDB1-215	ENST00000539712	PDCD1LG2	Q9BQ51	273 aa		13.57	□□□□□ -0.24
DDB1-215	ENST00000539712	JAM3	Q9BX67	310 aa		13.57	□□□□□ -0.24
DDB1-215	ENST00000539712	ZCCHC4	Q9H5U6	513 aa		13.57	□□□□□ -0.24
DDB1-215	ENST00000539712	FGF20	Q9NP95	211 aa	Predicted RBP	13.57	□□□□□ -0.24
DDB1-215	ENST00000539712	FBLN5	Q9UBX5	448 aa		13.57	□□□□□ -0.24
DDB1-215	ENST00000539712	SIGLEC9	Q9Y336	463 aa		13.57	□□□□□ -0.24
DDB1-215	ENST00000539712	MMP23A	O75900	390 aa		13.56	□□□□□ -0.24
DDB1-215	ENST00000539712	PRKACA	P17612	351 aa		13.56	□□□□□ -0.24
DDB1-215	ENST00000539712	GABRR1	P24046	479 aa		13.56	□□□□□ -0.24
DDB1-215	ENST00000539712	LMO1	P25800	156 aa		13.56	□□□□□ -0.24
DDB1-215	ENST00000539712	RAB13	P51153	203 aa		13.56	□□□□□ -0.24
DDB1-215	ENST00000539712	GTF2A1	P52655	376 aa	Predicted RBP	13.56	□□□□□ -0.24
DDB1-215	ENST00000539712	SNU13	P55769	128 aa	Known RBP	13.56	□□□□□ -0.24
DDB1-215	ENST00000539712	ZP1	P60852	638 aa		13.56	□□□□□ -0.24
DDB1-215	ENST00000539712	GRK1	Q15835	563 aa		13.56	□□□□□ -0.24
DDB1-215	ENST00000539712	SPIN3	Q5JUX0	258 aa		13.56	□□□□□ -0.24
DDB1-215	ENST00000539712	XAF1	Q6GPH4	301 aa		13.56	□□□□□ -0.24
DDB1-215	ENST00000539712	ZNF529	Q6P280	563 aa		13.56	□□□□□ -0.24
DDB1-215	ENST00000539712		Q6P435	159 aa		13.56	□□□□□ -0.24
DDB1-215	ENST00000539712	CCBE1	Q6UXH8	406 aa	Predicted RBP	13.56	□□□□□ -0.24
DDB1-215	ENST00000539712	OR5D18	Q8NGL1	313 aa		13.56	□□□□□ -0.24
DDB1-215	ENST00000539712	ZNF714	Q96N38	554 aa		13.56	□□□□□ -0.24
DDB1-215	ENST00000539712	RPL36	Q9Y3U8	105 aa	Known RBP	13.56	□□□□□ -0.24
DDB1-215	ENST00000539712	LINC00312	Q9Y6C7	94 aa		13.56	□□□□□ -0.24
DDB1-215	ENST00000539712	hADV38S2	A0JD32	116 aa		13.55	□□□□□ -0.24
DDB1-215	ENST00000539712	TMEM212	A6NML5	194 aa		13.55	□□□□□ -0.24
DDB1-215	ENST00000539712	MGST3	O14880	152 aa		13.55	□□□□□ -0.24
DDB1-215	ENST00000539712	BAG2	O95816	211 aa		13.55	□□□□□ -0.24
DDB1-215	ENST00000539712	OR2H2	O95918	312 aa		13.55	□□□□□ -0.24
DDB1-215	ENST00000539712	CYB5A	P00167	134 aa		13.55	□□□□□ -0.24

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