RNA–Protein interactions for RNA: ENST00000539506.5

SFSWAP-208, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 3,149 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-208ENST00000539506 SNAI3Q3KNW1 292 aa10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 TMEM268Q5VZI3 342 aa10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 PMS2CLQ68D20 193 aa10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 EIF5AL1Q6IS14 154 aaKnown RBP10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 PGAM5Q96HS1 289 aa10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 SRXN1Q9BYN0 137 aa10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 ZNF160Q9HCG1 818 aa10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 SH2D2AQ9NP31 389 aa10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 PTRH2Q9Y3E5 179 aaKnown RBP10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 A0A0G2JMM0 328 aa10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 A0A0J9YW62 118 aa10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 A0A1W2PPB8 328 aa10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 A0A1W2PRS3 328 aa10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 KIR3DP1A8MWS1 328 aa10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 OR2C1O95371 312 aa10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 MSR1P21757 451 aa10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 EIF2S3P41091 472 aaKnown RBP10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 CSNK1A1P48729 337 aa10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 PIGPP57054 158 aa10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 GRB2P62993 217 aaKnown RBP10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 VAX1Q5SQQ9 334 aa10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 RAET1LQ5VY80 246 aa10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 UNQ6494/PRO21346Q6UXR6 183 aa10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 Q7L0L9 218 aa10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 TMEM217Q8N7C4 229 aa10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 ZNF383Q8NA42 475 aa10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 TCTEX1D2Q8WW35 142 aa10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 ANGPTL4Q9BY76 406 aa10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 ZNF700Q9H0M5 742 aa10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 NELFAQ9H3P2 528 aa10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 OSGIN2Q9Y236 505 aa10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 ARHGAP21Q5T5U3 1957 aa10.93□□□□□ -0.66
SFSWAP-208ENST00000539506 ESPL1Q14674 2120 aa10.92□□□□□ -0.66
SFSWAP-208ENST00000539506 TP53I11O14683 189 aa10.92□□□□□ -0.66
SFSWAP-208ENST00000539506 TNFSF11O14788 317 aa10.92□□□□□ -0.66
SFSWAP-208ENST00000539506 SCGNO76038 276 aa10.92□□□□□ -0.66
SFSWAP-208ENST00000539506 PDGFBP01127 241 aaPredicted RBP10.92□□□□□ -0.66
SFSWAP-208ENST00000539506 IGHV2-70P01814 119 aa10.92□□□□□ -0.66
SFSWAP-208ENST00000539506 PRF1P14222 555 aa10.92□□□□□ -0.66
SFSWAP-208ENST00000539506 RGS19P49795 217 aa10.92□□□□□ -0.66
SFSWAP-208ENST00000539506 LSM6P62312 80 aaKnown RBP10.92□□□□□ -0.66
SFSWAP-208ENST00000539506 PYY3Q5JQD4 70 aa10.92□□□□□ -0.66
SFSWAP-208ENST00000539506 C10orf128Q5T292 105 aa10.92□□□□□ -0.66
SFSWAP-208ENST00000539506 OR2AE1Q8NHA4 323 aa10.92□□□□□ -0.66
SFSWAP-208ENST00000539506 S100A13Q99584 98 aa10.92□□□□□ -0.66
SFSWAP-208ENST00000539506 RBM24Q9BX46 236 aaKnown RBP10.92□□□□□ -0.66
SFSWAP-208ENST00000539506 WDR54Q9H977 334 aa10.92□□□□□ -0.66
SFSWAP-208ENST00000539506 FOXD3Q9UJU5 478 aaPredicted RBP10.92□□□□□ -0.66
SFSWAP-208ENST00000539506 V9GYS6 101 aa10.92□□□□□ -0.66
SFSWAP-208ENST00000539506 ASPMQ8IZT6 3477 aa10.92□□□□□ -0.66
SFSWAP-208ENST00000539506 FAM230AA0A1W2PPH8 454 aa10.92□□□□□ -0.66
SFSWAP-208ENST00000539506 CEACAM18A8MTB9 384 aa10.92□□□□□ -0.66
SFSWAP-208ENST00000539506 H0YL77 283 aa10.92□□□□□ -0.66
SFSWAP-208ENST00000539506 AP4M1O00189 453 aa10.92□□□□□ -0.66
SFSWAP-208ENST00000539506 S100A8P05109 93 aa10.92□□□□□ -0.66
SFSWAP-208ENST00000539506 TBPP20226 339 aa10.92□□□□□ -0.66
SFSWAP-208ENST00000539506 HIST1H3AP68431 136 aa10.92□□□□□ -0.66
SFSWAP-208ENST00000539506 HIST2H3PS2Q5TEC6 136 aa10.92□□□□□ -0.66
SFSWAP-208ENST00000539506 SPNS3Q6ZMD2 512 aa10.92□□□□□ -0.66
SFSWAP-208ENST00000539506 HIST2H3AQ71DI3 136 aa10.92□□□□□ -0.66
SFSWAP-208ENST00000539506 LHFPL1Q86WI0 220 aa10.92□□□□□ -0.66
SFSWAP-208ENST00000539506 ARRDC1Q8N5I2 433 aa10.92□□□□□ -0.66
SFSWAP-208ENST00000539506 MR1Q95460 341 aa10.92□□□□□ -0.66
SFSWAP-208ENST00000539506 PECRQ9BY49 303 aa10.92□□□□□ -0.66
SFSWAP-208ENST00000539506 C19orf12Q9NSK7 152 aa10.92□□□□□ -0.66
SFSWAP-208ENST00000539506 KPTNQ9Y664 436 aa10.92□□□□□ -0.66
SFSWAP-208ENST00000539506 C3orf80F5H4A9 247 aa10.91□□□□□ -0.66
SFSWAP-208ENST00000539506 OTX1P32242 354 aaPredicted RBP10.91□□□□□ -0.66
SFSWAP-208ENST00000539506 FOXL2NBQ6ZUU3 175 aa10.91□□□□□ -0.66
SFSWAP-208ENST00000539506 PEG10Q86TG7 708 aaKnown RBP10.91□□□□□ -0.66
SFSWAP-208ENST00000539506 SGPP2Q8IWX5 399 aa10.91□□□□□ -0.66
SFSWAP-208ENST00000539506 OR56B1Q8NGI3 324 aa10.91□□□□□ -0.66
SFSWAP-208ENST00000539506 OR10D4PQ8NGN7 298 aa10.91□□□□□ -0.66
SFSWAP-208ENST00000539506 MARS2Q96GW9 593 aaKnown RBP10.91□□□□□ -0.66
SFSWAP-208ENST00000539506 PARP11Q9NR21 331 aa10.91□□□□□ -0.66
SFSWAP-208ENST00000539506 GPR173Q9NS66 373 aa10.91□□□□□ -0.66
SFSWAP-208ENST00000539506 FAM24AA6NFZ4 105 aa10.91□□□□□ -0.66
SFSWAP-208ENST00000539506 IFITM10A6NMD0 228 aa10.91□□□□□ -0.66
SFSWAP-208ENST00000539506 DEDDO75618 318 aa10.91□□□□□ -0.66
SFSWAP-208ENST00000539506 IFNA21P01568 189 aa10.91□□□□□ -0.66
SFSWAP-208ENST00000539506 PET100P0DJ07 73 aa10.91□□□□□ -0.66
SFSWAP-208ENST00000539506 THBS4P35443 961 aa10.91□□□□□ -0.66
SFSWAP-208ENST00000539506 ZNF133P52736 654 aaPredicted RBP10.91□□□□□ -0.66
SFSWAP-208ENST00000539506 IL15RAQ13261 267 aa10.91□□□□□ -0.66
SFSWAP-208ENST00000539506 MYPOPQ86VE0 399 aaPredicted RBP10.91□□□□□ -0.66
SFSWAP-208ENST00000539506 GJC3Q8NFK1 279 aa10.91□□□□□ -0.66
SFSWAP-208ENST00000539506 URM1Q9BTM9 101 aaKnown RBP10.91□□□□□ -0.66
SFSWAP-208ENST00000539506 RNF122Q9H9V4 155 aa10.91□□□□□ -0.66
SFSWAP-208ENST00000539506 SEBOXQ9HB31 216 aaPredicted RBP10.91□□□□□ -0.66
SFSWAP-208ENST00000539506 FAM212BQ9NTI7 297 aaPredicted RBP10.91□□□□□ -0.66
SFSWAP-208ENST00000539506 PIGLQ9Y2B2 252 aa10.91□□□□□ -0.66
SFSWAP-208ENST00000539506 TNRC6BQ9UPQ9 1833 aaKnown RBP10.91□□□□□ -0.66
SFSWAP-208ENST00000539506 PRSS47A8MTI9 375 aa10.91□□□□□ -0.66
SFSWAP-208ENST00000539506 DHHO43323 396 aa10.91□□□□□ -0.66
SFSWAP-208ENST00000539506 DHRS3O75911 302 aa10.91□□□□□ -0.66
SFSWAP-208ENST00000539506 JTBO76095 146 aa10.91□□□□□ -0.66
SFSWAP-208ENST00000539506 CFIP05156 583 aa10.91□□□□□ -0.66
SFSWAP-208ENST00000539506 S100PP25815 95 aa10.91□□□□□ -0.66
SFSWAP-208ENST00000539506 RAB2AP61019 212 aa10.91□□□□□ -0.66
SFSWAP-208ENST00000539506 IL11RAQ14626 422 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms