RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 PRB3Q04118 309 aaPredicted RBP9.43□□□□□ -0.9
RTN3-209ENST00000538995 MEF2CQ06413 473 aaPredicted RBP9.43□□□□□ -0.9
RTN3-209ENST00000538995 ZNF273Q14593 569 aa9.43□□□□□ -0.9
RTN3-209ENST00000538995 TAF9Q16594 264 aa9.43□□□□□ -0.9
RTN3-209ENST00000538995 CCDC58Q4VC31 144 aa9.43□□□□□ -0.9
RTN3-209ENST00000538995 ZNF691Q5VV52 312 aa9.43□□□□□ -0.9
RTN3-209ENST00000538995 OLFML2AQ68BL7 652 aa9.43□□□□□ -0.9
RTN3-209ENST00000538995 SERPINA12Q8IW75 414 aa9.43□□□□□ -0.9
RTN3-209ENST00000538995 PARP16Q8N5Y8 322 aa9.43□□□□□ -0.9
RTN3-209ENST00000538995 SETD9Q8NE22 299 aa9.43□□□□□ -0.9
RTN3-209ENST00000538995 OR4M1Q8NGD0 313 aa9.43□□□□□ -0.9
RTN3-209ENST00000538995 OR5D14Q8NGL3 314 aa9.43□□□□□ -0.9
RTN3-209ENST00000538995 OR13C9Q8NGT0 318 aa9.43□□□□□ -0.9
RTN3-209ENST00000538995 OR5AK2Q8NH90 309 aa9.43□□□□□ -0.9
RTN3-209ENST00000538995 PPP1R35Q8TAP8 253 aa9.43□□□□□ -0.9
RTN3-209ENST00000538995 WFDC12Q8WWY7 111 aa9.43□□□□□ -0.9
RTN3-209ENST00000538995 CPNE2Q96FN4 548 aaPredicted RBP9.43□□□□□ -0.9
RTN3-209ENST00000538995 ZCCHC4Q9H5U6 513 aa9.43□□□□□ -0.9
RTN3-209ENST00000538995 RBFOX1Q9NWB1 397 aaKnown RBP9.43□□□□□ -0.9
RTN3-209ENST00000538995 GLS2Q9UI32 602 aa9.43□□□□□ -0.9
RTN3-209ENST00000538995 PCDHGB5Q9Y5G0 923 aa9.43□□□□□ -0.9
RTN3-209ENST00000538995 A0A1W2PRD5 423 aa9.42□□□□□ -0.9
RTN3-209ENST00000538995 A0A1W2PRF3 423 aa9.42□□□□□ -0.9
RTN3-209ENST00000538995 A0A1W2PRM7 423 aa9.42□□□□□ -0.9
RTN3-209ENST00000538995 hADV38S2A0JD32 116 aa9.42□□□□□ -0.9
RTN3-209ENST00000538995 CLPSL1A2RUU4 121 aa9.42□□□□□ -0.9
RTN3-209ENST00000538995 SULT1B1O43704 296 aa9.42□□□□□ -0.9
RTN3-209ENST00000538995 KDM4BO94953 1096 aa9.42□□□□□ -0.9
RTN3-209ENST00000538995 LIMS3P0CW19 117 aa9.42□□□□□ -0.9
RTN3-209ENST00000538995 LIMS4P0CW20 117 aa9.42□□□□□ -0.9
RTN3-209ENST00000538995 ZNF728P0DKX0 622 aa9.42□□□□□ -0.9
RTN3-209ENST00000538995 CCL3L1P16619 93 aa9.42□□□□□ -0.9
RTN3-209ENST00000538995 BCL3P20749 454 aa9.42□□□□□ -0.9
RTN3-209ENST00000538995 OMGP23515 440 aa9.42□□□□□ -0.9
RTN3-209ENST00000538995 PEX2P28328 305 aa9.42□□□□□ -0.9
RTN3-209ENST00000538995 NPBWR2P48146 333 aa9.42□□□□□ -0.9
RTN3-209ENST00000538995 EDDM3BP56851 147 aa9.42□□□□□ -0.9
RTN3-209ENST00000538995 IL18R1Q13478 541 aa9.42□□□□□ -0.9
RTN3-209ENST00000538995 RCN1Q15293 331 aa9.42□□□□□ -0.9
RTN3-209ENST00000538995 DHRS7BQ6IAN0 325 aaPredicted RBP9.42□□□□□ -0.9
RTN3-209ENST00000538995 TMPRSS11AQ6ZMR5 421 aa9.42□□□□□ -0.9
RTN3-209ENST00000538995 C17orf107Q6ZR85 190 aa9.42□□□□□ -0.9
RTN3-209ENST00000538995 PNKDQ8N490 385 aa9.42□□□□□ -0.9
RTN3-209ENST00000538995 ZSCAN4Q8NAM6 433 aaPredicted RBP9.42□□□□□ -0.9
RTN3-209ENST00000538995 RPS4Y2Q8TD47 263 aa9.42□□□□□ -0.9
RTN3-209ENST00000538995 PDCD1LG2Q9BQ51 273 aa9.42□□□□□ -0.9
RTN3-209ENST00000538995 HMG20AQ9NP66 347 aa9.42□□□□□ -0.9
RTN3-209ENST00000538995 IL36RNQ9UBH0 155 aa9.42□□□□□ -0.9
RTN3-209ENST00000538995 DHDHQ9UQ10 334 aa9.42□□□□□ -0.9
RTN3-209ENST00000538995 LINC00312Q9Y6C7 94 aa9.42□□□□□ -0.9
RTN3-209ENST00000538995 HSPE1-MOB4S4R3N1 261 aa9.42□□□□□ -0.9
RTN3-209ENST00000538995 TMEM82A0PJX8 343 aa9.41□□□□□ -0.9
RTN3-209ENST00000538995 E9PI62 339 aa9.41□□□□□ -0.9
RTN3-209ENST00000538995 MGST3O14880 152 aa9.41□□□□□ -0.9
RTN3-209ENST00000538995 SPRY1O43609 319 aaPredicted RBP9.41□□□□□ -0.9
RTN3-209ENST00000538995 PIPP12273 146 aaPredicted RBP9.41□□□□□ -0.9
RTN3-209ENST00000538995 PRKACAP17612 351 aa9.41□□□□□ -0.9
RTN3-209ENST00000538995 MYL12AP19105 171 aa9.41□□□□□ -0.9
RTN3-209ENST00000538995 GABRR1P24046 479 aa9.41□□□□□ -0.9
RTN3-209ENST00000538995 ERP29P30040 261 aaKnown RBP9.41□□□□□ -0.9
RTN3-209ENST00000538995 TGFBR2P37173 567 aa9.41□□□□□ -0.9
RTN3-209ENST00000538995 BMXP51813 675 aa9.41□□□□□ -0.9
RTN3-209ENST00000538995 MED21Q13503 144 aa9.41□□□□□ -0.9
RTN3-209ENST00000538995 CDK5R1Q15078 307 aa9.41□□□□□ -0.9
RTN3-209ENST00000538995 GRK1Q15835 563 aa9.41□□□□□ -0.9
RTN3-209ENST00000538995 SMN1Q16637 294 aaKnown RBP9.41□□□□□ -0.9
RTN3-209ENST00000538995 LRRC75BQ2VPJ9 315 aa9.41□□□□□ -0.9
RTN3-209ENST00000538995 ZNF529Q6P280 563 aa9.41□□□□□ -0.9
RTN3-209ENST00000538995 RPL22L1Q6P5R6 122 aaKnown RBP9.41□□□□□ -0.9
RTN3-209ENST00000538995 CHST4Q8NCG5 386 aa9.41□□□□□ -0.9
RTN3-209ENST00000538995 OR13D1Q8NGV5 346 aa9.41□□□□□ -0.9
RTN3-209ENST00000538995 GPR148Q8TDV2 347 aa9.41□□□□□ -0.9
RTN3-209ENST00000538995 TSEN15Q8WW01 171 aaKnown RBP9.41□□□□□ -0.9
RTN3-209ENST00000538995 CYGBQ8WWM9 190 aa9.41□□□□□ -0.9
RTN3-209ENST00000538995 TAF15Q92804 592 aaKnown RBP eCLIP9.41□□□□□ -0.9
RTN3-209ENST00000538995 FOXRED1Q96CU9 486 aaPredicted RBP9.41□□□□□ -0.9
RTN3-209ENST00000538995 AJUBAQ96IF1 538 aa9.41□□□□□ -0.9
RTN3-209ENST00000538995 ZNF714Q96N38 554 aa9.41□□□□□ -0.9
RTN3-209ENST00000538995 MEGF9Q9H1U4 602 aa9.41□□□□□ -0.9
RTN3-209ENST00000538995 C16orf95Q9H693 158 aa9.41□□□□□ -0.9
RTN3-209ENST00000538995 EXOSC4Q9NPD3 245 aaKnown RBP9.41□□□□□ -0.9
RTN3-209ENST00000538995 DIMT1Q9UNQ2 313 aaKnown RBP9.41□□□□□ -0.9
RTN3-209ENST00000538995 EXOSC1Q9Y3B2 195 aaKnown RBP9.41□□□□□ -0.9
RTN3-209ENST00000538995 PKD1L1Q8TDX9 2849 aa9.4□□□□□ -0.9
RTN3-209ENST00000538995 IGKV1-12A0A0C4DH73 117 aa9.4□□□□□ -0.9
RTN3-209ENST00000538995 FUOMA2VDF0 154 aa9.4□□□□□ -0.9
RTN3-209ENST00000538995 VGLL3A8MV65 326 aa9.4□□□□□ -0.9
RTN3-209ENST00000538995 ODF3BA8MYP8 253 aa9.4□□□□□ -0.9
RTN3-209ENST00000538995 SH2D1BO14796 132 aa9.4□□□□□ -0.9
RTN3-209ENST00000538995 CASQ2O14958 399 aaPredicted RBP9.4□□□□□ -0.9
RTN3-209ENST00000538995 PSPNO60542 156 aa9.4□□□□□ -0.9
RTN3-209ENST00000538995 TSPAN9O75954 239 aa9.4□□□□□ -0.9
RTN3-209ENST00000538995 INMTO95050 263 aa9.4□□□□□ -0.9
RTN3-209ENST00000538995 IGKV1D-12P01611 117 aa9.4□□□□□ -0.9
RTN3-209ENST00000538995 CSN2P05814 226 aa9.4□□□□□ -0.9
RTN3-209ENST00000538995 CD2P06729 351 aa9.4□□□□□ -0.9
RTN3-209ENST00000538995 HCKP08631 526 aa9.4□□□□□ -0.9
RTN3-209ENST00000538995 IGHV1-8P0DP01 117 aa9.4□□□□□ -0.9
RTN3-209ENST00000538995 RAB3AP20336 220 aa9.4□□□□□ -0.9
RTN3-209ENST00000538995 COX7A1P24310 79 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms