RNA–Protein interactions for RNA: ENST00000538834.5

CD9-208, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-208ENST00000538834 CHCHD3Q9NX63 227 aaKnown RBP11.25□□□□□ -0.61
CD9-208ENST00000538834 RAB26Q9ULW5 256 aa11.25□□□□□ -0.61
CD9-208ENST00000538834 IGHV1-69DA0A0B4J2H0 117 aa11.24□□□□□ -0.61
CD9-208ENST00000538834 RNASEK-C17orf49H0YIS7 233 aa11.24□□□□□ -0.61
CD9-208ENST00000538834 CLDN34H7C241 214 aa11.24□□□□□ -0.61
CD9-208ENST00000538834 ANGPTL7O43827 346 aa11.24□□□□□ -0.61
CD9-208ENST00000538834 PSPNO60542 156 aa11.24□□□□□ -0.61
CD9-208ENST00000538834 IGHV1-69P01742 117 aa11.24□□□□□ -0.61
CD9-208ENST00000538834 RAB3AP20336 220 aa11.24□□□□□ -0.61
CD9-208ENST00000538834 PRTN3P24158 256 aa11.24□□□□□ -0.61
CD9-208ENST00000538834 GP2P55259 537 aaKnown RBP11.24□□□□□ -0.61
CD9-208ENST00000538834 GPR50Q13585 617 aa11.24□□□□□ -0.61
CD9-208ENST00000538834 METTL11BQ5VVY1 283 aa11.24□□□□□ -0.61
CD9-208ENST00000538834 TMEM200BQ69YZ2 307 aa11.24□□□□□ -0.61
CD9-208ENST00000538834 Q6P435 159 aa11.24□□□□□ -0.61
CD9-208ENST00000538834 TCF23Q7RTU1 214 aa11.24□□□□□ -0.61
CD9-208ENST00000538834 ZFP41Q8N8Y5 198 aa11.24□□□□□ -0.61
CD9-208ENST00000538834 OR52N4Q8NGI2 321 aa11.24□□□□□ -0.61
CD9-208ENST00000538834 FAM216AQ8WUB2 273 aa11.24□□□□□ -0.61
CD9-208ENST00000538834 MYDGFQ969H8 173 aa11.24□□□□□ -0.61
CD9-208ENST00000538834 AJUBAQ96IF1 538 aa11.24□□□□□ -0.61
CD9-208ENST00000538834 SNX22Q96L94 193 aa11.24□□□□□ -0.61
CD9-208ENST00000538834 OR5M11Q96RB7 305 aa11.24□□□□□ -0.61
CD9-208ENST00000538834 PCGF1Q9BSM1 259 aa11.24□□□□□ -0.61
CD9-208ENST00000538834 OCEL1Q9H607 264 aa11.24□□□□□ -0.61
CD9-208ENST00000538834 C19orf12Q9NSK7 152 aa11.24□□□□□ -0.61
CD9-208ENST00000538834 TAS2R4Q9NYW5 299 aa11.24□□□□□ -0.61
CD9-208ENST00000538834 C17orf98A8MV24 154 aa11.23□□□□□ -0.61
CD9-208ENST00000538834 PTGES3LE9PB15 166 aa11.23□□□□□ -0.61
CD9-208ENST00000538834 GABRPO00591 440 aa11.23□□□□□ -0.61
CD9-208ENST00000538834 HAND1O96004 215 aa11.23□□□□□ -0.61
CD9-208ENST00000538834 CD2P06729 351 aa11.23□□□□□ -0.61
CD9-208ENST00000538834 OCM2P0CE71 109 aa11.23□□□□□ -0.61
CD9-208ENST00000538834 CELP19835 753 aa11.23□□□□□ -0.61
CD9-208ENST00000538834 VHLP40337 213 aa11.23□□□□□ -0.61
CD9-208ENST00000538834 SOX2P48431 317 aa11.23□□□□□ -0.61
CD9-208ENST00000538834 POU3F4P49335 361 aa11.23□□□□□ -0.61
CD9-208ENST00000538834 VMO1Q7Z5L0 202 aa11.23□□□□□ -0.61
CD9-208ENST00000538834 CDH26Q8IXH8 852 aa11.23□□□□□ -0.61
CD9-208ENST00000538834 OR8H2Q8N162 312 aa11.23□□□□□ -0.61
CD9-208ENST00000538834 BATF2Q8N1L9 274 aa11.23□□□□□ -0.61
CD9-208ENST00000538834 PIP4P2Q8N4L2 257 aa11.23□□□□□ -0.61
CD9-208ENST00000538834 SIGLECL1Q8N7X8 197 aa11.23□□□□□ -0.61
CD9-208ENST00000538834 TMEM185AQ8NFB2 350 aa11.23□□□□□ -0.61
CD9-208ENST00000538834 TSEN15Q8WW01 171 aaKnown RBP11.23□□□□□ -0.61
CD9-208ENST00000538834 C22orf15Q8WYQ4 148 aa11.23□□□□□ -0.61
CD9-208ENST00000538834 RFT1Q96AA3 541 aa11.23□□□□□ -0.61
CD9-208ENST00000538834 ORAI1Q96D31 301 aa11.23□□□□□ -0.61
CD9-208ENST00000538834 DERL3Q96Q80 235 aa11.23□□□□□ -0.61
CD9-208ENST00000538834 C19orf24Q9BVV8 132 aa11.23□□□□□ -0.61
CD9-208ENST00000538834 MND1Q9BWT6 205 aa11.23□□□□□ -0.61
CD9-208ENST00000538834 NEK6Q9HC98 313 aa11.23□□□□□ -0.61
CD9-208ENST00000538834 ISYNA1Q9NPH2 558 aa11.23□□□□□ -0.61
CD9-208ENST00000538834 TMEM138Q9NPI0 162 aa11.23□□□□□ -0.61
CD9-208ENST00000538834 SCN3BQ9NY72 215 aa11.23□□□□□ -0.61
CD9-208ENST00000538834 IL36GQ9NZH8 169 aa11.23□□□□□ -0.61
CD9-208ENST00000538834 FOXJ3Q9UPW0 622 aa11.23□□□□□ -0.61
CD9-208ENST00000538834 ERGIC3Q9Y282 383 aa11.23□□□□□ -0.61
CD9-208ENST00000538834 TPRKBQ9Y3C4 175 aa11.23□□□□□ -0.61
CD9-208ENST00000538834 TRAV8-7A0A075B6U6 113 aa11.22□□□□□ -0.61
CD9-208ENST00000538834 RNF212BA8MTL3 300 aa11.22□□□□□ -0.61
CD9-208ENST00000538834 MYL12BO14950 172 aa11.22□□□□□ -0.61
CD9-208ENST00000538834 DENRO43583 198 aaKnown RBP11.22□□□□□ -0.61
CD9-208ENST00000538834 NDUFB7P17568 137 aa11.22□□□□□ -0.61
CD9-208ENST00000538834 ERP29P30040 261 aaKnown RBP11.22□□□□□ -0.61
CD9-208ENST00000538834 PAX5Q02548 391 aa11.22□□□□□ -0.61
CD9-208ENST00000538834 TPBGQ13641 420 aa11.22□□□□□ -0.61
CD9-208ENST00000538834 SPHARQ15513 63 aa11.22□□□□□ -0.61
CD9-208ENST00000538834 NHLRC3Q5JS37 347 aa11.22□□□□□ -0.61
CD9-208ENST00000538834 RBM48Q5RL73 367 aaKnown RBP11.22□□□□□ -0.61
CD9-208ENST00000538834 GPR157Q5UAW9 335 aa11.22□□□□□ -0.61
CD9-208ENST00000538834 BRD3OSQ6XYD6 125 aa11.22□□□□□ -0.61
CD9-208ENST00000538834 Q6YL49 198 aa11.22□□□□□ -0.61
CD9-208ENST00000538834 PRSS48Q7RTY5 328 aa11.22□□□□□ -0.61
CD9-208ENST00000538834 BPIFB2Q8N4F0 458 aa11.22□□□□□ -0.61
CD9-208ENST00000538834 OR5D13Q8NGL4 314 aa11.22□□□□□ -0.61
CD9-208ENST00000538834 TBC1D15Q8TC07 691 aa11.22□□□□□ -0.61
CD9-208ENST00000538834 EMG1Q92979 244 aaKnown RBP11.22□□□□□ -0.61
CD9-208ENST00000538834 JMJD8Q96S16 334 aa11.22□□□□□ -0.61
CD9-208ENST00000538834 METTL8Q9H825 291 aaKnown RBP11.22□□□□□ -0.61
CD9-208ENST00000538834 OR14J1Q9UGF5 321 aa11.22□□□□□ -0.61
CD9-208ENST00000538834 IGHV3OR16-10A0A075B7F0 116 aa11.21□□□□□ -0.61
CD9-208ENST00000538834 MAGEA13PA6NCF6 341 aa11.21□□□□□ -0.61
CD9-208ENST00000538834 CYB5AP00167 134 aa11.21□□□□□ -0.61
CD9-208ENST00000538834 RBP4P02753 201 aa11.21□□□□□ -0.61
CD9-208ENST00000538834 CSN2P05814 226 aa11.21□□□□□ -0.61
CD9-208ENST00000538834 PRKACAP17612 351 aa11.21□□□□□ -0.61
CD9-208ENST00000538834 BDKRB2P30411 391 aa11.21□□□□□ -0.61
CD9-208ENST00000538834 PTGFRP43088 359 aa11.21□□□□□ -0.61
CD9-208ENST00000538834 OR3A1P47881 315 aa11.21□□□□□ -0.61
CD9-208ENST00000538834 MTNR1BP49286 362 aa11.21□□□□□ -0.61
CD9-208ENST00000538834 COMPP49747 757 aaPredicted RBP11.21□□□□□ -0.61
CD9-208ENST00000538834 RPL31P62899 125 aaKnown RBP11.21□□□□□ -0.61
CD9-208ENST00000538834 UBA52P62987 128 aaKnown RBP11.21□□□□□ -0.61
CD9-208ENST00000538834 MEF2CQ06413 473 aaPredicted RBP11.21□□□□□ -0.61
CD9-208ENST00000538834 ZNF273Q14593 569 aa11.21□□□□□ -0.61
CD9-208ENST00000538834 DEFB112Q30KQ8 113 aa11.21□□□□□ -0.61
CD9-208ENST00000538834 RUSC1-AS1Q66K80 236 aa11.21□□□□□ -0.61
CD9-208ENST00000538834 LDLRAD3Q86YD5 345 aa11.21□□□□□ -0.61
CD9-208ENST00000538834 CMTM4Q8IZR5 234 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms