RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 RNF144BQ7Z419 303 aa12.18□□□□□ -0.46
RAB40B-202ENST00000538809 PACRGLQ8N7B6 248 aa12.18□□□□□ -0.46
RAB40B-202ENST00000538809 ZSCAN4Q8NAM6 433 aaPredicted RBP12.18□□□□□ -0.46
RAB40B-202ENST00000538809 BEND2Q8NDZ0 799 aa12.18□□□□□ -0.46
RAB40B-202ENST00000538809 ZNF555Q8NEP9 628 aa12.18□□□□□ -0.46
RAB40B-202ENST00000538809 SPSB1Q96BD6 273 aa12.18□□□□□ -0.46
RAB40B-202ENST00000538809 MYCBPQ99417 103 aaPredicted RBP12.18□□□□□ -0.46
RAB40B-202ENST00000538809 SSX3Q99909 188 aa12.18□□□□□ -0.46
RAB40B-202ENST00000538809 CITED1Q99966 193 aa12.18□□□□□ -0.46
RAB40B-202ENST00000538809 FAM234AQ9H0X4 552 aa12.18□□□□□ -0.46
RAB40B-202ENST00000538809 PPA2Q9H2U2 334 aa12.18□□□□□ -0.46
RAB40B-202ENST00000538809 RBFOX1Q9NWB1 397 aaKnown RBP12.18□□□□□ -0.46
RAB40B-202ENST00000538809 TMEM82A0PJX8 343 aa12.17□□□□□ -0.46
RAB40B-202ENST00000538809 ZFPL1O95159 310 aa12.17□□□□□ -0.46
RAB40B-202ENST00000538809 HAND1O96004 215 aa12.17□□□□□ -0.46
RAB40B-202ENST00000538809 CHRM2P08172 466 aa12.17□□□□□ -0.46
RAB40B-202ENST00000538809 PRKACBP22694 351 aa12.17□□□□□ -0.46
RAB40B-202ENST00000538809 NPBWR2P48146 333 aa12.17□□□□□ -0.46
RAB40B-202ENST00000538809 ATP1B3P54709 279 aa12.17□□□□□ -0.46
RAB40B-202ENST00000538809 DLX6P56179 175 aa12.17□□□□□ -0.46
RAB40B-202ENST00000538809 PROK1P58294 105 aa12.17□□□□□ -0.46
RAB40B-202ENST00000538809 MRPL28Q13084 256 aaKnown RBP12.17□□□□□ -0.46
RAB40B-202ENST00000538809 RCN1Q15293 331 aa12.17□□□□□ -0.46
RAB40B-202ENST00000538809 LHFPL2Q6ZUX7 228 aa12.17□□□□□ -0.46
RAB40B-202ENST00000538809 GDPD3Q7L5L3 318 aa12.17□□□□□ -0.46
RAB40B-202ENST00000538809 TCF23Q7RTU1 214 aa12.17□□□□□ -0.46
RAB40B-202ENST00000538809 OR13C3Q8NGS6 347 aa12.17□□□□□ -0.46
RAB40B-202ENST00000538809 OR5R1Q8NH85 324 aa12.17□□□□□ -0.46
RAB40B-202ENST00000538809 CNIH3Q8TBE1 160 aa12.17□□□□□ -0.46
RAB40B-202ENST00000538809 RPS4Y2Q8TD47 263 aa12.17□□□□□ -0.46
RAB40B-202ENST00000538809 SPACA5Q96QH8 159 aa12.17□□□□□ -0.46
RAB40B-202ENST00000538809 CHST6Q9GZX3 395 aa12.17□□□□□ -0.46
RAB40B-202ENST00000538809 HEXA-AS1Q9H8Q6 139 aa12.17□□□□□ -0.46
RAB40B-202ENST00000538809 C8orf4Q9NR00 106 aa12.17□□□□□ -0.46
RAB40B-202ENST00000538809 IGKV1-12A0A0C4DH73 117 aa12.16□□□□□ -0.46
RAB40B-202ENST00000538809 TRBV2A0A0J9YWF9 115 aa12.16□□□□□ -0.46
RAB40B-202ENST00000538809 TMEM212A6NML5 194 aa12.16□□□□□ -0.46
RAB40B-202ENST00000538809 CASQ2O14958 399 aaPredicted RBP12.16□□□□□ -0.46
RAB40B-202ENST00000538809 WIPF1O43516 503 aa12.16□□□□□ -0.46
RAB40B-202ENST00000538809 ALX3O95076 343 aa12.16□□□□□ -0.46
RAB40B-202ENST00000538809 IGKV1D-12P01611 117 aa12.16□□□□□ -0.46
RAB40B-202ENST00000538809 PRKACAP17612 351 aa12.16□□□□□ -0.46
RAB40B-202ENST00000538809 DUSP1P28562 367 aa12.16□□□□□ -0.46
RAB40B-202ENST00000538809 MTCP1P56278 107 aa12.16□□□□□ -0.46
RAB40B-202ENST00000538809 PDZK1IP1Q13113 114 aa12.16□□□□□ -0.46
RAB40B-202ENST00000538809 LRRC36Q1X8D7 754 aa12.16□□□□□ -0.46
RAB40B-202ENST00000538809 LRRC75BQ2VPJ9 315 aa12.16□□□□□ -0.46
RAB40B-202ENST00000538809 PLA1AQ53H76 456 aa12.16□□□□□ -0.46
RAB40B-202ENST00000538809 XAF1Q6GPH4 301 aa12.16□□□□□ -0.46
RAB40B-202ENST00000538809 LHFPL4Q7Z7J7 247 aa12.16□□□□□ -0.46
RAB40B-202ENST00000538809 Q8IYB0 196 aa12.16□□□□□ -0.46
RAB40B-202ENST00000538809 OR8H2Q8N162 312 aa12.16□□□□□ -0.46
RAB40B-202ENST00000538809 PARP16Q8N5Y8 322 aa12.16□□□□□ -0.46
RAB40B-202ENST00000538809 ZNF676Q8N7Q3 588 aa12.16□□□□□ -0.46
RAB40B-202ENST00000538809 TPRX1Q8N7U7 411 aa12.16□□□□□ -0.46
RAB40B-202ENST00000538809 OR5D18Q8NGL1 313 aa12.16□□□□□ -0.46
RAB40B-202ENST00000538809 OR13C9Q8NGT0 318 aa12.16□□□□□ -0.46
RAB40B-202ENST00000538809 RGP1Q92546 391 aaPredicted RBP12.16□□□□□ -0.46
RAB40B-202ENST00000538809 OPALINQ96PE5 141 aa12.16□□□□□ -0.46
RAB40B-202ENST00000538809 PDCD1LG2Q9BQ51 273 aa12.16□□□□□ -0.46
RAB40B-202ENST00000538809 MEGF8Q7Z7M0 2845 aa12.15□□□□□ -0.46
RAB40B-202ENST00000538809 hCG_1809904A0A1W2PP81 198 aa12.15□□□□□ -0.46
RAB40B-202ENST00000538809 A0A1W2PPE2 198 aa12.15□□□□□ -0.46
RAB40B-202ENST00000538809 A0A1W2PR64 198 aa12.15□□□□□ -0.46
RAB40B-202ENST00000538809 A0A1W2PRV1 198 aa12.15□□□□□ -0.46
RAB40B-202ENST00000538809 C17orf98A8MV24 154 aa12.15□□□□□ -0.46
RAB40B-202ENST00000538809 CLPXO76031 633 aa12.15□□□□□ -0.46
RAB40B-202ENST00000538809 CCDC159P0C7I6 412 aa12.15□□□□□ -0.46
RAB40B-202ENST00000538809 OCM2P0CE71 109 aa12.15□□□□□ -0.46
RAB40B-202ENST00000538809 OCMP0CE72 109 aaPredicted RBP12.15□□□□□ -0.46
RAB40B-202ENST00000538809 GABRR1P24046 479 aa12.15□□□□□ -0.46
RAB40B-202ENST00000538809 DCKP27707 260 aa12.15□□□□□ -0.46
RAB40B-202ENST00000538809 TGFBR2P37173 567 aa12.15□□□□□ -0.46
RAB40B-202ENST00000538809 ETV1P50549 477 aa12.15□□□□□ -0.46
RAB40B-202ENST00000538809 GTF2A1P52655 376 aaPredicted RBP12.15□□□□□ -0.46
RAB40B-202ENST00000538809 ZNF146Q15072 292 aa12.15□□□□□ -0.46
RAB40B-202ENST00000538809 OGFRL1Q5TC84 451 aaPredicted RBP12.15□□□□□ -0.46
RAB40B-202ENST00000538809 TTC23Q5W5X9 447 aa12.15□□□□□ -0.46
RAB40B-202ENST00000538809 ASPHD2Q6ICH7 369 aa12.15□□□□□ -0.46
RAB40B-202ENST00000538809 FAM58AQ8N1B3 248 aa12.15□□□□□ -0.46
RAB40B-202ENST00000538809 OR52N4Q8NGI2 321 aa12.15□□□□□ -0.46
RAB40B-202ENST00000538809 HAVCR2Q8TDQ0 301 aa12.15□□□□□ -0.46
RAB40B-202ENST00000538809 SNX22Q96L94 193 aa12.15□□□□□ -0.46
RAB40B-202ENST00000538809 ZCCHC4Q9H5U6 513 aa12.15□□□□□ -0.46
RAB40B-202ENST00000538809 VWFP04275 2813 aa12.15□□□□□ -0.47
RAB40B-202ENST00000538809 SIRPB1O00241 398 aa12.14□□□□□ -0.47
RAB40B-202ENST00000538809 PSPNO60542 156 aa12.14□□□□□ -0.47
RAB40B-202ENST00000538809 TSPAN9O75954 239 aa12.14□□□□□ -0.47
RAB40B-202ENST00000538809 KDM4BO94953 1096 aa12.14□□□□□ -0.47
RAB40B-202ENST00000538809 CYB5AP00167 134 aa12.14□□□□□ -0.47
RAB40B-202ENST00000538809 RPSAP08865 295 aaKnown RBP12.14□□□□□ -0.47
RAB40B-202ENST00000538809 ZNF728P0DKX0 622 aa12.14□□□□□ -0.47
RAB40B-202ENST00000538809 GBX2P52951 348 aaPredicted RBP12.14□□□□□ -0.47
RAB40B-202ENST00000538809 LGALS4P56470 323 aa12.14□□□□□ -0.47
RAB40B-202ENST00000538809 ZP1P60852 638 aa12.14□□□□□ -0.47
RAB40B-202ENST00000538809 GRK1Q15835 563 aa12.14□□□□□ -0.47
RAB40B-202ENST00000538809 LAIR2Q6ISS4 152 aa12.14□□□□□ -0.47
RAB40B-202ENST00000538809 ZNF529Q6P280 563 aa12.14□□□□□ -0.47
RAB40B-202ENST00000538809 DYNAPQ8N1N2 210 aa12.14□□□□□ -0.47
RAB40B-202ENST00000538809 DHRSXQ8N5I4 330 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms