RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 FAM90A14PP0C7W9 464 aa12.05□□□□□ -0.48
LIMK1-208ENST00000538333 FAM90A24PP0C7X0 464 aa12.05□□□□□ -0.48
LIMK1-208ENST00000538333 BCL3P20749 454 aa12.05□□□□□ -0.48
LIMK1-208ENST00000538333 ZP3P21754 424 aa12.05□□□□□ -0.48
LIMK1-208ENST00000538333 GPM6AP51674 278 aa12.05□□□□□ -0.48
LIMK1-208ENST00000538333 RBM39Q14498 530 aaKnown RBP12.05□□□□□ -0.48
LIMK1-208ENST00000538333 PLEKHN1Q494U1 663 aaPredicted RBP12.05□□□□□ -0.48
LIMK1-208ENST00000538333 SLC22A25Q6T423 547 aa12.05□□□□□ -0.48
LIMK1-208ENST00000538333 HSD17B13Q7Z5P4 300 aaPredicted RBP12.05□□□□□ -0.48
LIMK1-208ENST00000538333 TMEM200AQ86VY9 491 aa12.05□□□□□ -0.48
LIMK1-208ENST00000538333 ZDHHC23Q8IYP9 409 aa12.05□□□□□ -0.48
LIMK1-208ENST00000538333 OR1K1Q8NGR3 316 aa12.05□□□□□ -0.48
LIMK1-208ENST00000538333 STOML3Q8TAV4 291 aa12.05□□□□□ -0.48
LIMK1-208ENST00000538333 PIK3IP1Q96FE7 263 aa12.05□□□□□ -0.48
LIMK1-208ENST00000538333 LINC00052Q96N35 136 aa12.05□□□□□ -0.48
LIMK1-208ENST00000538333 C12orf49Q9H741 205 aa12.05□□□□□ -0.48
LIMK1-208ENST00000538333 ZNF286AQ9HBT8 521 aa12.05□□□□□ -0.48
LIMK1-208ENST00000538333 PARD6AQ9NPB6 346 aa12.05□□□□□ -0.48
LIMK1-208ENST00000538333 C12orf4Q9NQ89 552 aa12.05□□□□□ -0.48
LIMK1-208ENST00000538333 C1orf123Q9NWV4 160 aa12.05□□□□□ -0.48
LIMK1-208ENST00000538333 NUP50Q9UKX7 468 aa12.05□□□□□ -0.48
LIMK1-208ENST00000538333 FAM186AA6NE01 2351 aa12.04□□□□□ -0.48
LIMK1-208ENST00000538333 PRR33A8MZF0 331 aa12.04□□□□□ -0.48
LIMK1-208ENST00000538333 F5H0A9 414 aaPredicted RBP12.04□□□□□ -0.48
LIMK1-208ENST00000538333 OR7C1O76099 320 aaPredicted RBP12.04□□□□□ -0.48
LIMK1-208ENST00000538333 ZNF205O95201 554 aa12.04□□□□□ -0.48
LIMK1-208ENST00000538333 HOXB5P09067 269 aa12.04□□□□□ -0.48
LIMK1-208ENST00000538333 RBMXP38159 391 aaKnown RBP12.04□□□□□ -0.48
LIMK1-208ENST00000538333 WNT5AP41221 380 aa12.04□□□□□ -0.48
LIMK1-208ENST00000538333 HAAOP46952 286 aa12.04□□□□□ -0.48
LIMK1-208ENST00000538333 TNFSF10P50591 281 aa12.04□□□□□ -0.48
LIMK1-208ENST00000538333 PLP2Q04941 152 aa12.04□□□□□ -0.48
LIMK1-208ENST00000538333 RAB32Q13637 225 aa12.04□□□□□ -0.48
LIMK1-208ENST00000538333 HIKESHIQ53FT3 197 aa12.04□□□□□ -0.48
LIMK1-208ENST00000538333 TMEM211Q6ICI0 200 aa12.04□□□□□ -0.48
LIMK1-208ENST00000538333 TMPRSS7Q7RTY8 843 aa12.04□□□□□ -0.48
LIMK1-208ENST00000538333 SGPP2Q8IWX5 399 aa12.04□□□□□ -0.48
LIMK1-208ENST00000538333 BATF2Q8N1L9 274 aa12.04□□□□□ -0.48
LIMK1-208ENST00000538333 TMEM178AQ8NBL3 297 aa12.04□□□□□ -0.48
LIMK1-208ENST00000538333 BVESQ8NE79 360 aa12.04□□□□□ -0.48
LIMK1-208ENST00000538333 BCL2L2Q92843 193 aaPredicted RBP12.04□□□□□ -0.48
LIMK1-208ENST00000538333 OPA3Q9H6K4 179 aa12.04□□□□□ -0.48
LIMK1-208ENST00000538333 GP6Q9HCN6 339 aa12.04□□□□□ -0.48
LIMK1-208ENST00000538333 MSGN1A6NI15 193 aa12.03□□□□□ -0.48
LIMK1-208ENST00000538333 SLC22A20A6NK97 555 aa12.03□□□□□ -0.48
LIMK1-208ENST00000538333 TEX46H3BTG2 121 aa12.03□□□□□ -0.48
LIMK1-208ENST00000538333 SCO1O75880 301 aa12.03□□□□□ -0.48
LIMK1-208ENST00000538333 SNTB1Q13884 538 aaKnown RBP12.03□□□□□ -0.48
LIMK1-208ENST00000538333 FAM209AQ5JX71 171 aa12.03□□□□□ -0.48
LIMK1-208ENST00000538333 FBXW9Q5XUX1 488 aa12.03□□□□□ -0.48
LIMK1-208ENST00000538333 SLAMF9Q96A28 289 aa12.03□□□□□ -0.48
LIMK1-208ENST00000538333 CCDC120Q96HB5 630 aa12.03□□□□□ -0.48
LIMK1-208ENST00000538333 HS3ST6Q96QI5 342 aa12.03□□□□□ -0.48
LIMK1-208ENST00000538333 CYTL1Q9NRR1 136 aa12.03□□□□□ -0.48
LIMK1-208ENST00000538333 OTOGLQ3ZCN5 2332 aa12.03□□□□□ -0.48
LIMK1-208ENST00000538333 CD300LBA8K4G0 201 aa12.03□□□□□ -0.48
LIMK1-208ENST00000538333 ZNF728P0DKX0 622 aa12.03□□□□□ -0.48
LIMK1-208ENST00000538333 PIGPP57054 158 aa12.03□□□□□ -0.48
LIMK1-208ENST00000538333 FGF12P61328 243 aa12.03□□□□□ -0.48
LIMK1-208ENST00000538333 CLN3Q13286 438 aa12.03□□□□□ -0.48
LIMK1-208ENST00000538333 PAN3Q58A45 887 aaKnown RBP12.03□□□□□ -0.48
LIMK1-208ENST00000538333 UNQ6126/PRO20091Q6UXV3 157 aa12.03□□□□□ -0.48
LIMK1-208ENST00000538333 DPPA2Q7Z7J5 298 aa12.03□□□□□ -0.48
LIMK1-208ENST00000538333 DEFB124Q8NES8 71 aa12.03□□□□□ -0.48
LIMK1-208ENST00000538333 TOMM40LQ969M1 308 aa12.03□□□□□ -0.48
LIMK1-208ENST00000538333 GALNT14Q96FL9 552 aa12.03□□□□□ -0.48
LIMK1-208ENST00000538333 AQP10Q96PS8 301 aa12.03□□□□□ -0.48
LIMK1-208ENST00000538333 ZNF442Q9H7R0 627 aa12.03□□□□□ -0.48
LIMK1-208ENST00000538333 MTCH1Q9NZJ7 389 aa12.03□□□□□ -0.48
LIMK1-208ENST00000538333 SESN1Q9Y6P5 492 aa12.03□□□□□ -0.48
LIMK1-208ENST00000538333 ZNF732B4DXR9 585 aa12.02□□□□□ -0.48
LIMK1-208ENST00000538333 FTH1P19P0C7X4 201 aa12.02□□□□□ -0.48
LIMK1-208ENST00000538333 FCGR2CP31995 323 aa12.02□□□□□ -0.48
LIMK1-208ENST00000538333 PMP22Q01453 160 aa12.02□□□□□ -0.48
LIMK1-208ENST00000538333 NAAAQ02083 359 aa12.02□□□□□ -0.48
LIMK1-208ENST00000538333 SRSF6Q13247 344 aaKnown RBP12.02□□□□□ -0.48
LIMK1-208ENST00000538333 VASH2Q86V25 355 aa12.02□□□□□ -0.48
LIMK1-208ENST00000538333 FAM219AQ8IW50 185 aa12.02□□□□□ -0.48
LIMK1-208ENST00000538333 OR5A2Q8NGI9 324 aa12.02□□□□□ -0.48
LIMK1-208ENST00000538333 MOB3AQ96BX8 217 aa12.02□□□□□ -0.48
LIMK1-208ENST00000538333 ASCL3Q9NQ33 180 aa12.02□□□□□ -0.48
LIMK1-208ENST00000538333 RCC2Q9P258 522 aaKnown RBP12.02□□□□□ -0.48
LIMK1-208ENST00000538333 ZNF175Q9Y473 711 aa12.02□□□□□ -0.48
LIMK1-208ENST00000538333 ESPL1Q14674 2120 aa12.02□□□□□ -0.49
LIMK1-208ENST00000538333 NKX2-8O15522 239 aa12.02□□□□□ -0.49
LIMK1-208ENST00000538333 LILRA1O75019 489 aa12.02□□□□□ -0.49
LIMK1-208ENST00000538333 M6PRP20645 277 aa12.02□□□□□ -0.49
LIMK1-208ENST00000538333 APLNRP35414 380 aa12.02□□□□□ -0.49
LIMK1-208ENST00000538333 UCP3P55916 312 aa12.02□□□□□ -0.49
LIMK1-208ENST00000538333 Q6ZS49 121 aa12.02□□□□□ -0.49
LIMK1-208ENST00000538333 SLC30A7Q8NEW0 376 aa12.02□□□□□ -0.49
LIMK1-208ENST00000538333 EXTL1Q92935 676 aa12.02□□□□□ -0.49
LIMK1-208ENST00000538333 SHARPINQ9H0F6 387 aa12.02□□□□□ -0.49
LIMK1-208ENST00000538333 DNTTIP1Q9H147 329 aa12.02□□□□□ -0.49
LIMK1-208ENST00000538333 NAA60Q9H7X0 242 aa12.02□□□□□ -0.49
LIMK1-208ENST00000538333 DNAJB11Q9UBS4 358 aa12.02□□□□□ -0.49
LIMK1-208ENST00000538333 TMA7Q9Y2S6 64 aaKnown RBP12.02□□□□□ -0.49
LIMK1-208ENST00000538333 MUC6Q6W4X9 2439 aa12.02□□□□□ -0.49
LIMK1-208ENST00000538333 LOC400499M0QZD8 3231 aa12.01□□□□□ -0.49
LIMK1-208ENST00000538333 PRSS44E7EML9 344 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms