RNA–Protein interactions for RNA: ENST00000538120.5

CLIP1-210, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 2,472 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-210ENST00000538120 LCATP04180 440 aa9.3□□□□□ -0.92
CLIP1-210ENST00000538120 H2AFB1P0C5Y9 115 aa9.3□□□□□ -0.92
CLIP1-210ENST00000538120 PTGFRP43088 359 aa9.3□□□□□ -0.92
CLIP1-210ENST00000538120 ALDH3B1P43353 468 aa9.3□□□□□ -0.92
CLIP1-210ENST00000538120 TNFSF10P50591 281 aa9.3□□□□□ -0.92
CLIP1-210ENST00000538120 TMEM50BP56557 158 aa9.3□□□□□ -0.92
CLIP1-210ENST00000538120 RNASE10Q5GAN6 216 aaKnown RBP9.3□□□□□ -0.92
CLIP1-210ENST00000538120 HAGHLQ6PII5 290 aaPredicted RBP9.3□□□□□ -0.92
CLIP1-210ENST00000538120 NUFIP2Q7Z417 695 aaKnown RBP9.3□□□□□ -0.92
CLIP1-210ENST00000538120 TRAPPC6BQ86SZ2 158 aa9.3□□□□□ -0.92
CLIP1-210ENST00000538120 FDCSPQ8NFU4 85 aa9.3□□□□□ -0.92
CLIP1-210ENST00000538120 KCNG3Q8TAE7 436 aa9.3□□□□□ -0.92
CLIP1-210ENST00000538120 MITD1Q8WV92 249 aa9.3□□□□□ -0.92
CLIP1-210ENST00000538120 PHYHIPLQ96FC7 376 aa9.3□□□□□ -0.92
CLIP1-210ENST00000538120 ZDHHC11Q9H8X9 412 aa9.3□□□□□ -0.92
CLIP1-210ENST00000538120 PRR13Q9NZ81 148 aa9.3□□□□□ -0.92
CLIP1-210ENST00000538120 ZNF107Q9UII5 783 aaPredicted RBP9.3□□□□□ -0.92
CLIP1-210ENST00000538120 KCNK7Q9Y2U2 307 aa9.3□□□□□ -0.92
CLIP1-210ENST00000538120 ZNF503-AS2A6NEH8 195 aa9.3□□□□□ -0.92
CLIP1-210ENST00000538120 HRH1P35367 487 aa9.3□□□□□ -0.92
CLIP1-210ENST00000538120 CCL11P51671 97 aa9.3□□□□□ -0.92
CLIP1-210ENST00000538120 C9orf135Q5VTT2 229 aa9.3□□□□□ -0.92
CLIP1-210ENST00000538120 LPCAT3Q6P1A2 487 aa9.3□□□□□ -0.92
CLIP1-210ENST00000538120 INO80EQ8NBZ0 244 aaPredicted RBP9.3□□□□□ -0.92
CLIP1-210ENST00000538120 SEMA6DQ8NFY4 1073 aa9.3□□□□□ -0.92
CLIP1-210ENST00000538120 OR5D18Q8NGL1 313 aa9.3□□□□□ -0.92
CLIP1-210ENST00000538120 THAP6Q8TBB0 222 aa9.3□□□□□ -0.92
CLIP1-210ENST00000538120 RRNAD1Q96FB5 475 aaKnown RBP9.3□□□□□ -0.92
CLIP1-210ENST00000538120 GPER1Q99527 375 aa9.3□□□□□ -0.92
CLIP1-210ENST00000538120 GPR173Q9NS66 373 aa9.3□□□□□ -0.92
CLIP1-210ENST00000538120 CELSR3Q9NYQ7 3312 aa9.3□□□□□ -0.92
CLIP1-210ENST00000538120 RTTNQ86VV8 2226 aa9.3□□□□□ -0.92
CLIP1-210ENST00000538120 A0A0B4J2A0 478 aa9.29□□□□□ -0.92
CLIP1-210ENST00000538120 C5orf51A6NDU8 294 aa9.29□□□□□ -0.92
CLIP1-210ENST00000538120 DHRS7CA6NNS2 312 aa9.29□□□□□ -0.92
CLIP1-210ENST00000538120 FOXI3A8MTJ6 420 aaPredicted RBP9.29□□□□□ -0.92
CLIP1-210ENST00000538120 F8W036 122 aa9.29□□□□□ -0.92
CLIP1-210ENST00000538120 RAD51DO75771 328 aa9.29□□□□□ -0.92
CLIP1-210ENST00000538120 SCGNO76038 276 aa9.29□□□□□ -0.92
CLIP1-210ENST00000538120 CHRM2P08172 466 aa9.29□□□□□ -0.92
CLIP1-210ENST00000538120 FCGR2AP12318 317 aa9.29□□□□□ -0.92
CLIP1-210ENST00000538120 NPBWR1P48145 328 aa9.29□□□□□ -0.92
CLIP1-210ENST00000538120 BLOC1S1P78537 153 aa9.29□□□□□ -0.92
CLIP1-210ENST00000538120 PMP22Q01453 160 aa9.29□□□□□ -0.92
CLIP1-210ENST00000538120 FAM89BQ8N5H3 189 aa9.29□□□□□ -0.92
CLIP1-210ENST00000538120 OR4A4PQ8NGN8 299 aa9.29□□□□□ -0.92
CLIP1-210ENST00000538120 TMED6Q8WW62 240 aa9.29□□□□□ -0.92
CLIP1-210ENST00000538120 PIGTQ969N2 578 aa9.29□□□□□ -0.92
CLIP1-210ENST00000538120 PIK3IP1Q96FE7 263 aa9.29□□□□□ -0.92
CLIP1-210ENST00000538120 C12orf57Q99622 126 aa9.29□□□□□ -0.92
CLIP1-210ENST00000538120 PRRG4Q9BZD6 226 aa9.29□□□□□ -0.92
CLIP1-210ENST00000538120 NDRG3Q9UGV2 375 aa9.29□□□□□ -0.92
CLIP1-210ENST00000538120 SHPKQ9UHJ6 478 aa9.29□□□□□ -0.92
CLIP1-210ENST00000538120 A0A096LPE4 126 aa9.29□□□□□ -0.92
CLIP1-210ENST00000538120 TRGV5A0A0B4J1U4 118 aa9.29□□□□□ -0.92
CLIP1-210ENST00000538120 A0A1W2PPZ6 126 aa9.29□□□□□ -0.92
CLIP1-210ENST00000538120 H0YIZ8 118 aa9.29□□□□□ -0.92
CLIP1-210ENST00000538120 TM4SF5O14894 197 aa9.29□□□□□ -0.92
CLIP1-210ENST00000538120 EFSO43281 561 aa9.29□□□□□ -0.92
CLIP1-210ENST00000538120 CRTAPO75718 401 aaPredicted RBP9.29□□□□□ -0.92
CLIP1-210ENST00000538120 WISP2O76076 250 aa9.29□□□□□ -0.92
CLIP1-210ENST00000538120 FARS2O95363 451 aaKnown RBP9.29□□□□□ -0.92
CLIP1-210ENST00000538120 EDN3P14138 238 aa9.29□□□□□ -0.92
CLIP1-210ENST00000538120 TNFSF4P23510 183 aa9.29□□□□□ -0.92
CLIP1-210ENST00000538120 NFYBP25208 207 aa9.29□□□□□ -0.92
CLIP1-210ENST00000538120 ZNF92Q03936 586 aa9.29□□□□□ -0.92
CLIP1-210ENST00000538120 RNPS1Q15287 305 aaKnown RBP9.29□□□□□ -0.92
CLIP1-210ENST00000538120 IGFL2Q6UWQ7 119 aa9.29□□□□□ -0.92
CLIP1-210ENST00000538120 SVBPQ8N300 66 aa9.29□□□□□ -0.92
CLIP1-210ENST00000538120 TMEM178AQ8NBL3 297 aa9.29□□□□□ -0.92
CLIP1-210ENST00000538120 C2CD4CQ8TF44 421 aa9.29□□□□□ -0.92
CLIP1-210ENST00000538120 PHB2Q99623 299 aa9.29□□□□□ -0.92
CLIP1-210ENST00000538120 TMEM59Q9BXS4 323 aa9.29□□□□□ -0.92
CLIP1-210ENST00000538120 IGKV1-27A0A075B6S5 117 aa9.28□□□□□ -0.92
CLIP1-210ENST00000538120 hCG_38984A0A1B0GV85 526 aa9.28□□□□□ -0.92
CLIP1-210ENST00000538120 RAB19A4D1S5 217 aa9.28□□□□□ -0.92
CLIP1-210ENST00000538120 MSGN1A6NI15 193 aa9.28□□□□□ -0.92
CLIP1-210ENST00000538120 NUDT19A8MXV4 375 aa9.28□□□□□ -0.92
CLIP1-210ENST00000538120 ZNF587BE7ETH6 402 aa9.28□□□□□ -0.92
CLIP1-210ENST00000538120 ZNHIT1O43257 154 aa9.28□□□□□ -0.92
CLIP1-210ENST00000538120 FGF16O43320 207 aa9.28□□□□□ -0.92
CLIP1-210ENST00000538120 PMP2P02689 132 aa9.28□□□□□ -0.92
CLIP1-210ENST00000538120 HLA-GP17693 338 aa9.28□□□□□ -0.92
CLIP1-210ENST00000538120 PVALBP20472 110 aaPredicted RBP9.28□□□□□ -0.92
CLIP1-210ENST00000538120 SERPINF1P36955 418 aa9.28□□□□□ -0.92
CLIP1-210ENST00000538120 FAM3AP98173 230 aa9.28□□□□□ -0.92
CLIP1-210ENST00000538120 TMEM42Q69YG0 159 aa9.28□□□□□ -0.92
CLIP1-210ENST00000538120 UQCC3Q6UW78 93 aa9.28□□□□□ -0.92
CLIP1-210ENST00000538120 COLCA1Q6ZS62 124 aa9.28□□□□□ -0.92
CLIP1-210ENST00000538120 TMEM200AQ86VY9 491 aa9.28□□□□□ -0.92
CLIP1-210ENST00000538120 CCDC36Q8IYA8 594 aa9.28□□□□□ -0.92
CLIP1-210ENST00000538120 ZFP82Q8N141 532 aa9.28□□□□□ -0.92
CLIP1-210ENST00000538120 PPP1R35Q8TAP8 253 aa9.28□□□□□ -0.92
CLIP1-210ENST00000538120 MARCH1Q8TCQ1 289 aa9.28□□□□□ -0.92
CLIP1-210ENST00000538120 DCUN1D4Q92564 292 aa9.28□□□□□ -0.92
CLIP1-210ENST00000538120 APH1AQ96BI3 265 aa9.28□□□□□ -0.92
CLIP1-210ENST00000538120 PRRT1Q99946 306 aa9.28□□□□□ -0.92
CLIP1-210ENST00000538120 CMSS1Q9BQ75 279 aaKnown RBP9.28□□□□□ -0.92
CLIP1-210ENST00000538120 RNF126Q9BV68 326 aa9.28□□□□□ -0.92
CLIP1-210ENST00000538120 C1QTNF5Q9BXJ0 243 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms