RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 EXOSC1Q9Y3B2 195 aaKnown RBP6.87□□□□□ -1.31
SPARC-208ENST00000538026 NOTCH1P46531 2555 aa6.86□□□□□ -1.31
SPARC-208ENST00000538026 TRAV8-7A0A075B6U6 113 aa6.86□□□□□ -1.31
SPARC-208ENST00000538026 TRBV5-7A0A0A0MS05 114 aa6.86□□□□□ -1.31
SPARC-208ENST00000538026 A0A1W2PRD5 423 aa6.86□□□□□ -1.31
SPARC-208ENST00000538026 A0A1W2PRF3 423 aa6.86□□□□□ -1.31
SPARC-208ENST00000538026 A0A1W2PRM7 423 aa6.86□□□□□ -1.31
SPARC-208ENST00000538026 EFCAB10A6NFE3 127 aa6.86□□□□□ -1.31
SPARC-208ENST00000538026 H0YJX3 145 aa6.86□□□□□ -1.31
SPARC-208ENST00000538026 CLDN34H7C241 214 aa6.86□□□□□ -1.31
SPARC-208ENST00000538026 HOXA3O43365 443 aaPredicted RBP6.86□□□□□ -1.31
SPARC-208ENST00000538026 RNASE1P07998 156 aaKnown RBP6.86□□□□□ -1.31
SPARC-208ENST00000538026 MELTFP08582 738 aa6.86□□□□□ -1.31
SPARC-208ENST00000538026 CCDC159P0C7I6 412 aa6.86□□□□□ -1.31
SPARC-208ENST00000538026 ZNF20P17024 532 aa6.86□□□□□ -1.31
SPARC-208ENST00000538026 IGFBP3P17936 291 aaPredicted RBP6.86□□□□□ -1.31
SPARC-208ENST00000538026 PRKACBP22694 351 aa6.86□□□□□ -1.31
SPARC-208ENST00000538026 POU3F4P49335 361 aa6.86□□□□□ -1.31
SPARC-208ENST00000538026 COMPP49747 757 aaPredicted RBP6.86□□□□□ -1.31
SPARC-208ENST00000538026 ATP1B3P54709 279 aa6.86□□□□□ -1.31
SPARC-208ENST00000538026 RELBQ01201 579 aa6.86□□□□□ -1.31
SPARC-208ENST00000538026 MRPL28Q13084 256 aaKnown RBP6.86□□□□□ -1.31
SPARC-208ENST00000538026 BAMBIQ13145 260 aa6.86□□□□□ -1.31
SPARC-208ENST00000538026 INSL4Q14641 139 aa6.86□□□□□ -1.31
SPARC-208ENST00000538026 IRF3Q14653 427 aa6.86□□□□□ -1.31
SPARC-208ENST00000538026 PDCD1Q15116 288 aa6.86□□□□□ -1.31
SPARC-208ENST00000538026 CNN3Q15417 329 aaKnown RBP6.86□□□□□ -1.31
SPARC-208ENST00000538026 KISS1Q15726 138 aa6.86□□□□□ -1.31
SPARC-208ENST00000538026 CCDC58Q4VC31 144 aa6.86□□□□□ -1.31
SPARC-208ENST00000538026 UTF1Q5T230 341 aa6.86□□□□□ -1.31
SPARC-208ENST00000538026 GPR157Q5UAW9 335 aa6.86□□□□□ -1.31
SPARC-208ENST00000538026 ASCL4Q6XD76 172 aa6.86□□□□□ -1.31
SPARC-208ENST00000538026 LHFPL2Q6ZUX7 228 aa6.86□□□□□ -1.31
SPARC-208ENST00000538026 AHSA2Q719I0 299 aa6.86□□□□□ -1.31
SPARC-208ENST00000538026 SERPINA12Q8IW75 414 aa6.86□□□□□ -1.31
SPARC-208ENST00000538026 MKXQ8IYA7 352 aa6.86□□□□□ -1.31
SPARC-208ENST00000538026 FAM58AQ8N1B3 248 aa6.86□□□□□ -1.31
SPARC-208ENST00000538026 ZNF561Q8N587 486 aa6.86□□□□□ -1.31
SPARC-208ENST00000538026 NANOGP1Q8N7R0 232 aa6.86□□□□□ -1.31
SPARC-208ENST00000538026 TPRX1Q8N7U7 411 aa6.86□□□□□ -1.31
SPARC-208ENST00000538026 SETD9Q8NE22 299 aa6.86□□□□□ -1.31
SPARC-208ENST00000538026 Q8NFD4 153 aa6.86□□□□□ -1.31
SPARC-208ENST00000538026 OR4S1Q8NGB4 309 aa6.86□□□□□ -1.31
SPARC-208ENST00000538026 SMIM19Q96E16 107 aa6.86□□□□□ -1.31
SPARC-208ENST00000538026 OR5M11Q96RB7 305 aa6.86□□□□□ -1.31
SPARC-208ENST00000538026 PPIL3Q9H2H8 161 aaKnown RBP6.86□□□□□ -1.31
SPARC-208ENST00000538026 ZNF281Q9Y2X9 895 aa6.86□□□□□ -1.31
SPARC-208ENST00000538026 DNAH9Q9NYC9 4486 aa6.86□□□□□ -1.31
SPARC-208ENST00000538026 TRBV23-1A0A0A0MS06 115 aa6.85□□□□□ -1.31
SPARC-208ENST00000538026 A0A1W2PPK0 400 aa6.85□□□□□ -1.31
SPARC-208ENST00000538026 C17orf98A8MV24 154 aa6.85□□□□□ -1.31
SPARC-208ENST00000538026 M0R1W7 72 aa6.85□□□□□ -1.31
SPARC-208ENST00000538026 SLC1A7O00341 560 aa6.85□□□□□ -1.31
SPARC-208ENST00000538026 GABRPO00591 440 aa6.85□□□□□ -1.31
SPARC-208ENST00000538026 SULT1B1O43704 296 aa6.85□□□□□ -1.31
SPARC-208ENST00000538026 GPX5O75715 221 aa6.85□□□□□ -1.31
SPARC-208ENST00000538026 MMP23AO75900 390 aa6.85□□□□□ -1.31
SPARC-208ENST00000538026 HAND1O96004 215 aa6.85□□□□□ -1.31
SPARC-208ENST00000538026 IGHV4-59P01825 116 aa6.85□□□□□ -1.31
SPARC-208ENST00000538026 CDK1P06493 297 aa6.85□□□□□ -1.31
SPARC-208ENST00000538026 MYF6P23409 242 aa6.85□□□□□ -1.31
SPARC-208ENST00000538026 LMO1P25800 156 aa6.85□□□□□ -1.31
SPARC-208ENST00000538026 OR3A1P47881 315 aa6.85□□□□□ -1.31
SPARC-208ENST00000538026 SNU13P55769 128 aaKnown RBP6.85□□□□□ -1.31
SPARC-208ENST00000538026 BPIFB3P59826 476 aa6.85□□□□□ -1.31
SPARC-208ENST00000538026 RPL31P62899 125 aaKnown RBP6.85□□□□□ -1.31
SPARC-208ENST00000538026 SLC35A2P78381 396 aa6.85□□□□□ -1.31
SPARC-208ENST00000538026 RNLSQ5VYX0 342 aa6.85□□□□□ -1.31
SPARC-208ENST00000538026 BAIAP2L2Q6UXY1 529 aa6.85□□□□□ -1.31
SPARC-208ENST00000538026 TMPRSS11AQ6ZMR5 421 aa6.85□□□□□ -1.31
SPARC-208ENST00000538026 FAM185AQ8N0U4 392 aa6.85□□□□□ -1.31
SPARC-208ENST00000538026 GPR148Q8TDV2 347 aa6.85□□□□□ -1.31
SPARC-208ENST00000538026 EMG1Q92979 244 aaKnown RBP6.85□□□□□ -1.31
SPARC-208ENST00000538026 MRPL48Q96GC5 212 aaKnown RBP6.85□□□□□ -1.31
SPARC-208ENST00000538026 SNX22Q96L94 193 aa6.85□□□□□ -1.31
SPARC-208ENST00000538026 CHST6Q9GZX3 395 aa6.85□□□□□ -1.31
SPARC-208ENST00000538026 DUSP21Q9H596 190 aa6.85□□□□□ -1.31
SPARC-208ENST00000538026 DHDHQ9UQ10 334 aa6.85□□□□□ -1.31
SPARC-208ENST00000538026 A0A0G2JK05 382 aa6.84□□□□□ -1.31
SPARC-208ENST00000538026 PNMA8CA0A1B0GUJ8 204 aa6.84□□□□□ -1.31
SPARC-208ENST00000538026 A0A1W2PP11 408 aa6.84□□□□□ -1.31
SPARC-208ENST00000538026 A0A1W2PQ09 198 aa6.84□□□□□ -1.31
SPARC-208ENST00000538026 IRGMA1A4Y4 181 aa6.84□□□□□ -1.31
SPARC-208ENST00000538026 PTGES3LE9PB15 166 aa6.84□□□□□ -1.31
SPARC-208ENST00000538026 TRIM77I1YAP6 450 aa6.84□□□□□ -1.31
SPARC-208ENST00000538026 NPFFO15130 113 aa6.84□□□□□ -1.31
SPARC-208ENST00000538026 OR2H2O95918 312 aa6.84□□□□□ -1.31
SPARC-208ENST00000538026 ALDOBP05062 364 aa6.84□□□□□ -1.31
SPARC-208ENST00000538026 CHRM2P08172 466 aa6.84□□□□□ -1.31
SPARC-208ENST00000538026 RPSAP08865 295 aaKnown RBP6.84□□□□□ -1.31
SPARC-208ENST00000538026 HKR1P10072 659 aa6.84□□□□□ -1.31
SPARC-208ENST00000538026 PRKACAP17612 351 aa6.84□□□□□ -1.31
SPARC-208ENST00000538026 MYL12AP19105 171 aa6.84□□□□□ -1.31
SPARC-208ENST00000538026 OR3A4PP47883 348 aa6.84□□□□□ -1.31
SPARC-208ENST00000538026 UBE2E1P51965 193 aa6.84□□□□□ -1.31
SPARC-208ENST00000538026 CAPZA1P52907 286 aa6.84□□□□□ -1.31
SPARC-208ENST00000538026 SCGB2A2Q13296 93 aa6.84□□□□□ -1.31
SPARC-208ENST00000538026 TAF9Q16594 264 aa6.84□□□□□ -1.31
SPARC-208ENST00000538026 AWAT1Q58HT5 328 aa6.84□□□□□ -1.31
SPARC-208ENST00000538026 UNQ9370/PRO34162Q6UXP9 181 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms