RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 SULT1C4O75897 302 aa6.79□□□□□ -1.32
USP28-203ENST00000537490 HAND1O96004 215 aa6.79□□□□□ -1.32
USP28-203ENST00000537490 SERPINA3P01011 423 aa6.79□□□□□ -1.32
USP28-203ENST00000537490 BCL3P20749 454 aa6.79□□□□□ -1.32
USP28-203ENST00000537490 PEX2P28328 305 aa6.79□□□□□ -1.32
USP28-203ENST00000537490 HTR1FP30939 366 aa6.79□□□□□ -1.32
USP28-203ENST00000537490 OR12D2P58182 307 aa6.79□□□□□ -1.32
USP28-203ENST00000537490 ZNF85Q03923 595 aa6.79□□□□□ -1.32
USP28-203ENST00000537490 ZNF91Q05481 1191 aa6.79□□□□□ -1.32
USP28-203ENST00000537490 SLC34A1Q06495 639 aa6.79□□□□□ -1.32
USP28-203ENST00000537490 GRK1Q15835 563 aa6.79□□□□□ -1.32
USP28-203ENST00000537490 TMEM95Q3KNT9 176 aa6.79□□□□□ -1.32
USP28-203ENST00000537490 TP53I3Q53FA7 332 aa6.79□□□□□ -1.32
USP28-203ENST00000537490 MINOS1Q5TGZ0 78 aa6.79□□□□□ -1.32
USP28-203ENST00000537490 BAIAP2L2Q6UXY1 529 aa6.79□□□□□ -1.32
USP28-203ENST00000537490 NDUFA11Q86Y39 141 aa6.79□□□□□ -1.32
USP28-203ENST00000537490 ZDHHC13Q8IUH4 622 aa6.79□□□□□ -1.32
USP28-203ENST00000537490 ZNF676Q8N7Q3 588 aa6.79□□□□□ -1.32
USP28-203ENST00000537490 OR10H4Q8NGA5 316 aa6.79□□□□□ -1.32
USP28-203ENST00000537490 NDNFQ8TB73 568 aa6.79□□□□□ -1.32
USP28-203ENST00000537490 EME1Q96AY2 570 aa6.79□□□□□ -1.32
USP28-203ENST00000537490 ADAT3Q96EY9 351 aaPredicted RBP6.79□□□□□ -1.32
USP28-203ENST00000537490 CIB1Q99828 191 aa6.79□□□□□ -1.32
USP28-203ENST00000537490 OCSTAMPQ9BR26 566 aa6.79□□□□□ -1.32
USP28-203ENST00000537490 ADI1Q9BV57 179 aa6.79□□□□□ -1.32
USP28-203ENST00000537490 CHST6Q9GZX3 395 aa6.79□□□□□ -1.32
USP28-203ENST00000537490 GABARAPL1Q9H0R8 117 aa6.79□□□□□ -1.32
USP28-203ENST00000537490 SEBOXQ9HB31 216 aaPredicted RBP6.79□□□□□ -1.32
USP28-203ENST00000537490 RBFOX1Q9NWB1 397 aaKnown RBP6.79□□□□□ -1.32
USP28-203ENST00000537490 LINC00312Q9Y6C7 94 aa6.79□□□□□ -1.32
USP28-203ENST00000537490 SESN1Q9Y6P5 492 aa6.79□□□□□ -1.32
USP28-203ENST00000537490 MINOS1-NBL1R4GNA1 71 aa6.79□□□□□ -1.32
USP28-203ENST00000537490 LOC107986453A0A1B0GWG9 222 aa6.78□□□□□ -1.32
USP28-203ENST00000537490 FAM90A22PA8MWA6 464 aa6.78□□□□□ -1.32
USP28-203ENST00000537490 F2RL2O00254 374 aa6.78□□□□□ -1.32
USP28-203ENST00000537490 XPNPEP2O43895 674 aa6.78□□□□□ -1.32
USP28-203ENST00000537490 ENTPD6O75354 484 aa6.78□□□□□ -1.32
USP28-203ENST00000537490 ATF1P18846 271 aa6.78□□□□□ -1.32
USP28-203ENST00000537490 GABRR1P24046 479 aa6.78□□□□□ -1.32
USP28-203ENST00000537490 CD24P25063 80 aa6.78□□□□□ -1.32
USP28-203ENST00000537490 FASP25445 335 aa6.78□□□□□ -1.32
USP28-203ENST00000537490 ATP6V1E1P36543 226 aa6.78□□□□□ -1.32
USP28-203ENST00000537490 OR3A1P47881 315 aa6.78□□□□□ -1.32
USP28-203ENST00000537490 POU3F4P49335 361 aa6.78□□□□□ -1.32
USP28-203ENST00000537490 RBP2P50120 134 aa6.78□□□□□ -1.32
USP28-203ENST00000537490 ATP1B3P54709 279 aa6.78□□□□□ -1.32
USP28-203ENST00000537490 SNU13P55769 128 aaKnown RBP6.78□□□□□ -1.32
USP28-203ENST00000537490 ISL1P61371 349 aa6.78□□□□□ -1.32
USP28-203ENST00000537490 CD83Q01151 205 aa6.78□□□□□ -1.32
USP28-203ENST00000537490 ZNF146Q15072 292 aa6.78□□□□□ -1.32
USP28-203ENST00000537490 RNF144BQ7Z419 303 aa6.78□□□□□ -1.32
USP28-203ENST00000537490 REC114Q7Z4M0 266 aa6.78□□□□□ -1.32
USP28-203ENST00000537490 ENTHD1Q8IYW4 607 aa6.78□□□□□ -1.32
USP28-203ENST00000537490 FAM58AQ8N1B3 248 aa6.78□□□□□ -1.32
USP28-203ENST00000537490 CCDC54Q8NEL0 328 aa6.78□□□□□ -1.32
USP28-203ENST00000537490 DNAAF1Q8NEP3 725 aa6.78□□□□□ -1.32
USP28-203ENST00000537490 OR4F17Q8NGA8 305 aa6.78□□□□□ -1.32
USP28-203ENST00000537490 OR4P4Q8NGL7 312 aa6.78□□□□□ -1.32
USP28-203ENST00000537490 MRAPQ8TCY5 172 aa6.78□□□□□ -1.32
USP28-203ENST00000537490 BCAS4Q8TDM0 211 aa6.78□□□□□ -1.32
USP28-203ENST00000537490 FGGYQ96C11 551 aa6.78□□□□□ -1.32
USP28-203ENST00000537490 C10orf35Q96D05 121 aa6.78□□□□□ -1.32
USP28-203ENST00000537490 OR4F4Q96R69 305 aa6.78□□□□□ -1.32
USP28-203ENST00000537490 CLEC7AQ9BXN2 247 aa6.78□□□□□ -1.32
USP28-203ENST00000537490 TMEM133Q9H2Q1 129 aa6.78□□□□□ -1.32
USP28-203ENST00000537490 RIBC2Q9H4K1 309 aa6.78□□□□□ -1.32
USP28-203ENST00000537490 GNG8Q9UK08 70 aa6.78□□□□□ -1.32
USP28-203ENST00000537490 AP4S1Q9Y587 144 aa6.78□□□□□ -1.32
USP28-203ENST00000537490 IGKV1-12A0A0C4DH73 117 aa6.77□□□□□ -1.33
USP28-203ENST00000537490 TRBV2A0A0J9YWF9 115 aa6.77□□□□□ -1.33
USP28-203ENST00000537490 A0A1W2PRX2 142 aa6.77□□□□□ -1.33
USP28-203ENST00000537490 SIRPB1O00241 398 aa6.77□□□□□ -1.33
USP28-203ENST00000537490 MGST3O14880 152 aa6.77□□□□□ -1.33
USP28-203ENST00000537490 PIN1P1O15428 100 aa6.77□□□□□ -1.33
USP28-203ENST00000537490 PEX14O75381 377 aa6.77□□□□□ -1.33
USP28-203ENST00000537490 IGKV1D-12P01611 117 aa6.77□□□□□ -1.33
USP28-203ENST00000537490 UBCP0CG48 685 aaKnown RBP6.77□□□□□ -1.33
USP28-203ENST00000537490 PRKACAP17612 351 aa6.77□□□□□ -1.33
USP28-203ENST00000537490 AZGP1P25311 298 aaKnown RBP6.77□□□□□ -1.33
USP28-203ENST00000537490 HTR1DP28221 377 aa6.77□□□□□ -1.33
USP28-203ENST00000537490 ERP29P30040 261 aaKnown RBP6.77□□□□□ -1.33
USP28-203ENST00000537490 GDNFP39905 211 aa6.77□□□□□ -1.33
USP28-203ENST00000537490 VDAC2P45880 294 aaPredicted RBP6.77□□□□□ -1.33
USP28-203ENST00000537490 MTCP1P56278 107 aa6.77□□□□□ -1.33
USP28-203ENST00000537490 P2RX3P56373 397 aa6.77□□□□□ -1.33
USP28-203ENST00000537490 LOXL3P58215 753 aa6.77□□□□□ -1.33
USP28-203ENST00000537490 NANOS3P60323 173 aaKnown RBP6.77□□□□□ -1.33
USP28-203ENST00000537490 BNIP1Q12981 228 aa6.77□□□□□ -1.33
USP28-203ENST00000537490 TMED1Q13445 227 aa6.77□□□□□ -1.33
USP28-203ENST00000537490 ARSJQ5FYB0 599 aaPredicted RBP6.77□□□□□ -1.33
USP28-203ENST00000537490 TCTEX1D4Q5JR98 221 aa6.77□□□□□ -1.33
USP28-203ENST00000537490 PRAMEF5Q5TYX0 476 aa6.77□□□□□ -1.33
USP28-203ENST00000537490 TMEM244Q5VVB8 128 aa6.77□□□□□ -1.33
USP28-203ENST00000537490 UTS2BQ765I0 119 aa6.77□□□□□ -1.33
USP28-203ENST00000537490 TRAPPC6BQ86SZ2 158 aa6.77□□□□□ -1.33
USP28-203ENST00000537490 Q8IYB0 196 aa6.77□□□□□ -1.33
USP28-203ENST00000537490 ABHD12Q8N2K0 398 aa6.77□□□□□ -1.33
USP28-203ENST00000537490 WFDC9Q8NEX5 89 aa6.77□□□□□ -1.33
USP28-203ENST00000537490 OR5AU1Q8NGC0 362 aa6.77□□□□□ -1.33
USP28-203ENST00000537490 OR8J1Q8NGP2 316 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms