RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 M0R135 149 aa11.65□□□□□ -0.55
HDAC4-214ENST00000535493 ST8SIA3O43173 380 aa11.65□□□□□ -0.55
HDAC4-214ENST00000535493 SSSCA1O60232 199 aa11.65□□□□□ -0.55
HDAC4-214ENST00000535493 GDF9O60383 454 aa11.65□□□□□ -0.55
HDAC4-214ENST00000535493 IFNA17P01571 189 aa11.65□□□□□ -0.55
HDAC4-214ENST00000535493 CHATP28329 748 aa11.65□□□□□ -0.55
HDAC4-214ENST00000535493 EWSR1Q01844 656 aaKnown RBP eCLIP11.65□□□□□ -0.556e-6■■■■□ 22.1
HDAC4-214ENST00000535493 TSC22D1Q15714 1073 aa11.65□□□□□ -0.55
HDAC4-214ENST00000535493 CXorf66Q5JRM2 361 aaPredicted RBP11.65□□□□□ -0.55
HDAC4-214ENST00000535493 UNQ6494/PRO21346Q6UXR6 183 aa11.65□□□□□ -0.55
HDAC4-214ENST00000535493 MSI2Q96DH6 328 aaKnown RBP11.65□□□□□ -0.55
HDAC4-214ENST00000535493 MVB12AQ96EY5 273 aa11.65□□□□□ -0.55
HDAC4-214ENST00000535493 ZNF799Q96GE5 643 aa11.65□□□□□ -0.55
HDAC4-214ENST00000535493 TCEAL7Q9BRU2 100 aa11.65□□□□□ -0.55
HDAC4-214ENST00000535493 GPR61Q9BZJ8 451 aa11.65□□□□□ -0.55
HDAC4-214ENST00000535493 CHST5Q9GZS9 411 aa11.65□□□□□ -0.55
HDAC4-214ENST00000535493 P4HTMQ9NXG6 502 aa11.65□□□□□ -0.55
HDAC4-214ENST00000535493 SLC7A11Q9UPY5 501 aa11.65□□□□□ -0.55
HDAC4-214ENST00000535493 IGSF23A1L1A6 192 aa11.64□□□□□ -0.55
HDAC4-214ENST00000535493 CXorf65A6NEN9 183 aa11.64□□□□□ -0.55
HDAC4-214ENST00000535493 ZNF724A8MTY0 619 aa11.64□□□□□ -0.55
HDAC4-214ENST00000535493 C3orf80F5H4A9 247 aa11.64□□□□□ -0.55
HDAC4-214ENST00000535493 CELA2AP08217 269 aa11.64□□□□□ -0.55
HDAC4-214ENST00000535493 EPHA1P21709 976 aa11.64□□□□□ -0.55
HDAC4-214ENST00000535493 PTGDSP41222 190 aa11.64□□□□□ -0.55
HDAC4-214ENST00000535493 FBXL14Q8N1E6 418 aa11.64□□□□□ -0.55
HDAC4-214ENST00000535493 OR6X1Q8NH79 312 aa11.64□□□□□ -0.55
HDAC4-214ENST00000535493 PBDC1Q9BVG4 233 aa11.64□□□□□ -0.55
HDAC4-214ENST00000535493 DOCK7Q96N67 2140 aa11.64□□□□□ -0.55
HDAC4-214ENST00000535493 RBFOX3A6NFN3 312 aa11.64□□□□□ -0.55
HDAC4-214ENST00000535493 NPIPB13A6NJU9 1138 aa11.64□□□□□ -0.55
HDAC4-214ENST00000535493 NPIPB4C9JG80 1138 aa11.64□□□□□ -0.55
HDAC4-214ENST00000535493 HSPB6O14558 160 aa11.64□□□□□ -0.55
HDAC4-214ENST00000535493 CYB5BO43169 146 aa11.64□□□□□ -0.55
HDAC4-214ENST00000535493 TRGC2P03986 189 aa11.64□□□□□ -0.55
HDAC4-214ENST00000535493 STARD6P59095 220 aa11.64□□□□□ -0.55
HDAC4-214ENST00000535493 UBE2KP61086 200 aa11.64□□□□□ -0.55
HDAC4-214ENST00000535493 DLK1P80370 383 aa11.64□□□□□ -0.55
HDAC4-214ENST00000535493 ENDOGQ14249 297 aaKnown RBP11.64□□□□□ -0.55
HDAC4-214ENST00000535493 RHEBQ15382 184 aa11.64□□□□□ -0.55
HDAC4-214ENST00000535493 FAM180AQ6UWF9 173 aa11.64□□□□□ -0.55
HDAC4-214ENST00000535493 LIAT1Q6ZQX7 453 aa11.64□□□□□ -0.55
HDAC4-214ENST00000535493 NFAM1Q8NET5 270 aaPredicted RBP11.64□□□□□ -0.55
HDAC4-214ENST00000535493 OR10AD1Q8NGE0 317 aa11.64□□□□□ -0.55
HDAC4-214ENST00000535493 NAT6Q93015 286 aa11.64□□□□□ -0.55
HDAC4-214ENST00000535493 ZNF501Q96CX3 271 aaPredicted RBP11.64□□□□□ -0.55
HDAC4-214ENST00000535493 MUCL1Q96DR8 90 aa11.64□□□□□ -0.55
HDAC4-214ENST00000535493 TM2D1Q9BX74 207 aa11.64□□□□□ -0.55
HDAC4-214ENST00000535493 FAM86C1Q9NVL1 165 aa11.64□□□□□ -0.55
HDAC4-214ENST00000535493 NECAP2Q9NVZ3 263 aa11.64□□□□□ -0.55
HDAC4-214ENST00000535493 IGKV1-12A0A0C4DH73 117 aa11.63□□□□□ -0.55
HDAC4-214ENST00000535493 H3BP45 60 aa11.63□□□□□ -0.55
HDAC4-214ENST00000535493 K7N7A8 449 aa11.63□□□□□ -0.55
HDAC4-214ENST00000535493 IGKV1D-12P01611 117 aa11.63□□□□□ -0.55
HDAC4-214ENST00000535493 RNF224P0DH78 156 aa11.63□□□□□ -0.55
HDAC4-214ENST00000535493 UCP2P55851 309 aa11.63□□□□□ -0.55
HDAC4-214ENST00000535493 GRB2P62993 217 aaKnown RBP11.63□□□□□ -0.55
HDAC4-214ENST00000535493 HNF4GQ14541 408 aa11.63□□□□□ -0.55
HDAC4-214ENST00000535493 SPIN3Q5JUX0 258 aa11.63□□□□□ -0.55
HDAC4-214ENST00000535493 SLC16A14Q7RTX9 510 aa11.63□□□□□ -0.55
HDAC4-214ENST00000535493 MRGPRX4Q96LA9 322 aa11.63□□□□□ -0.55
HDAC4-214ENST00000535493 OXGR1Q96P68 337 aa11.63□□□□□ -0.55
HDAC4-214ENST00000535493 PRO1933Q9H354 126 aa11.63□□□□□ -0.55
HDAC4-214ENST00000535493 HOXA5P20719 270 aa11.63□□□□□ -0.55
HDAC4-214ENST00000535493 AADACP22760 399 aa11.63□□□□□ -0.55
HDAC4-214ENST00000535493 DUSP1P28562 367 aa11.63□□□□□ -0.55
HDAC4-214ENST00000535493 GPX4P36969 197 aaPredicted RBP11.63□□□□□ -0.55
HDAC4-214ENST00000535493 D2HGDHQ8N465 521 aa11.63□□□□□ -0.55
HDAC4-214ENST00000535493 DSPP15924 2871 aaKnown RBP11.62□□□□□ -0.55
HDAC4-214ENST00000535493 IGHV1OR15-9A0A0B4J2B8 117 aa11.62□□□□□ -0.55
HDAC4-214ENST00000535493 LMO7DNF2Z398 122 aa11.62□□□□□ -0.55
HDAC4-214ENST00000535493 SOD3P08294 240 aa11.62□□□□□ -0.55
HDAC4-214ENST00000535493 MSR1P21757 451 aa11.62□□□□□ -0.55
HDAC4-214ENST00000535493 RAB5CP51148 216 aa11.62□□□□□ -0.55
HDAC4-214ENST00000535493 AFF3P51826 1226 aaKnown RBP11.62□□□□□ -0.55
HDAC4-214ENST00000535493 GNMTQ14749 295 aa11.62□□□□□ -0.55
HDAC4-214ENST00000535493 ELOBQ15370 118 aa11.62□□□□□ -0.55
HDAC4-214ENST00000535493 SPSB3Q6PJ21 355 aa11.62□□□□□ -0.55
HDAC4-214ENST00000535493 OR2C3Q8N628 320 aa11.62□□□□□ -0.55
HDAC4-214ENST00000535493 GJC3Q8NFK1 279 aa11.62□□□□□ -0.55
HDAC4-214ENST00000535493 OR5C1Q8NGR4 320 aa11.62□□□□□ -0.55
HDAC4-214ENST00000535493 C18orf12Q96KH6 178 aa11.62□□□□□ -0.55
HDAC4-214ENST00000535493 YPEL4Q96NS1 127 aa11.62□□□□□ -0.55
HDAC4-214ENST00000535493 C8orf33Q9H7E9 229 aaPredicted RBP11.62□□□□□ -0.55
HDAC4-214ENST00000535493 HIST1H2BKO60814 126 aa11.62□□□□□ -0.55
HDAC4-214ENST00000535493 HIST1H2BJP06899 126 aa11.62□□□□□ -0.55
HDAC4-214ENST00000535493 HIST1H2BOP23527 126 aa11.62□□□□□ -0.55
HDAC4-214ENST00000535493 S100A2P29034 98 aa11.62□□□□□ -0.55
HDAC4-214ENST00000535493 HIST1H2BBP33778 126 aa11.62□□□□□ -0.55
HDAC4-214ENST00000535493 HIST1H2BDP58876 126 aa11.62□□□□□ -0.55
HDAC4-214ENST00000535493 HIST1H2BCP62807 126 aa11.62□□□□□ -0.55
HDAC4-214ENST00000535493 PPA1Q15181 289 aa11.62□□□□□ -0.55
HDAC4-214ENST00000535493 HIST2H2BEQ16778 126 aa11.62□□□□□ -0.55
HDAC4-214ENST00000535493 IZUMO4Q1ZYL8 232 aa11.62□□□□□ -0.55
HDAC4-214ENST00000535493 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.62□□□□□ -0.55
HDAC4-214ENST00000535493 ZNF468Q5VIY5 522 aaPredicted RBP11.62□□□□□ -0.55
HDAC4-214ENST00000535493 ZNF429Q86V71 674 aa11.62□□□□□ -0.55
HDAC4-214ENST00000535493 MYPOPQ86VE0 399 aaPredicted RBP11.62□□□□□ -0.55
HDAC4-214ENST00000535493 TMEM123Q8N131 208 aa11.62□□□□□ -0.55
HDAC4-214ENST00000535493 HIST1H2BHQ93079 126 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms