RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 DIAPH2-AS1Q14236 149 aa6.36□□□□□ -1.39
CLIP1-206ENST00000535290 TEX30Q5JUR7 227 aa6.36□□□□□ -1.39
CLIP1-206ENST00000535290 ERICH5Q6P6B1 374 aa6.36□□□□□ -1.39
CLIP1-206ENST00000535290 HEPN1Q6WQI6 88 aa6.36□□□□□ -1.39
CLIP1-206ENST00000535290 TRAPPC6BQ86SZ2 158 aa6.36□□□□□ -1.39
CLIP1-206ENST00000535290 ZNF491Q8N8L2 437 aa6.36□□□□□ -1.39
CLIP1-206ENST00000535290 OR2T4Q8NH00 348 aa6.36□□□□□ -1.39
CLIP1-206ENST00000535290 RNF133Q8WVZ7 376 aa6.36□□□□□ -1.39
CLIP1-206ENST00000535290 RPEQ96AT9 228 aa6.36□□□□□ -1.39
CLIP1-206ENST00000535290 CREB3L1Q96BA8 519 aa6.36□□□□□ -1.39
CLIP1-206ENST00000535290 SNX22Q96L94 193 aa6.36□□□□□ -1.39
CLIP1-206ENST00000535290 UBE2E2Q96LR5 201 aa6.36□□□□□ -1.39
CLIP1-206ENST00000535290 CCDC28BQ9BUN5 200 aa6.36□□□□□ -1.39
CLIP1-206ENST00000535290 ABHD6Q9BV23 337 aa6.36□□□□□ -1.39
CLIP1-206ENST00000535290 TMED9Q9BVK6 235 aa6.36□□□□□ -1.39
CLIP1-206ENST00000535290 CHST6Q9GZX3 395 aa6.36□□□□□ -1.39
CLIP1-206ENST00000535290 ALX4Q9H161 411 aaPredicted RBP6.36□□□□□ -1.39
CLIP1-206ENST00000535290 ABCG5Q9H222 651 aa6.36□□□□□ -1.39
CLIP1-206ENST00000535290 GHITMQ9H3K2 345 aa6.36□□□□□ -1.39
CLIP1-206ENST00000535290 TUBA4BQ9H853 241 aa6.36□□□□□ -1.39
CLIP1-206ENST00000535290 CD300AQ9UGN4 299 aa6.36□□□□□ -1.39
CLIP1-206ENST00000535290 PFDN2Q9UHV9 154 aa6.36□□□□□ -1.39
CLIP1-206ENST00000535290 DSCAML1Q8TD84 2053 aa6.36□□□□□ -1.39
CLIP1-206ENST00000535290 KIAA2026Q5HYC2 2103 aa6.35□□□□□ -1.39
CLIP1-206ENST00000535290 CXorf65A6NEN9 183 aa6.35□□□□□ -1.39
CLIP1-206ENST00000535290 FXYD1O00168 92 aa6.35□□□□□ -1.39
CLIP1-206ENST00000535290 IDH3BO43837 385 aa6.35□□□□□ -1.39
CLIP1-206ENST00000535290 IGHA1P01876 353 aa6.35□□□□□ -1.39
CLIP1-206ENST00000535290 GYPBP06028 91 aa6.35□□□□□ -1.39
CLIP1-206ENST00000535290 H1F0P07305 194 aaKnown RBP6.35□□□□□ -1.39
CLIP1-206ENST00000535290 FMO3P31513 532 aa6.35□□□□□ -1.39
CLIP1-206ENST00000535290 ISL1P61371 349 aa6.35□□□□□ -1.39
CLIP1-206ENST00000535290 GRK1Q15835 563 aa6.35□□□□□ -1.39
CLIP1-206ENST00000535290 TNFAIP8L3Q5GJ75 292 aa6.35□□□□□ -1.39
CLIP1-206ENST00000535290 PLCXD3Q63HM9 321 aa6.35□□□□□ -1.39
CLIP1-206ENST00000535290 OR52W1Q6IF63 320 aa6.35□□□□□ -1.39
CLIP1-206ENST00000535290 TGIF2LXQ8IUE1 241 aa6.35□□□□□ -1.39
CLIP1-206ENST00000535290 OR8B12Q8NGG6 310 aa6.35□□□□□ -1.39
CLIP1-206ENST00000535290 FAM81AQ8TBF8 368 aa6.35□□□□□ -1.39
CLIP1-206ENST00000535290 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.35□□□□□ -1.39
CLIP1-206ENST00000535290 TOMM40LQ969M1 308 aa6.35□□□□□ -1.39
CLIP1-206ENST00000535290 HRASLS5Q96KN8 279 aa6.35□□□□□ -1.39
CLIP1-206ENST00000535290 KCTD7Q96MP8 289 aa6.35□□□□□ -1.39
CLIP1-206ENST00000535290 OR4C12Q96R67 309 aa6.35□□□□□ -1.39
CLIP1-206ENST00000535290 HSPB9Q9BQS6 159 aa6.35□□□□□ -1.39
CLIP1-206ENST00000535290 PARD6BQ9BYG5 372 aa6.35□□□□□ -1.39
CLIP1-206ENST00000535290 ACTR3BQ9P1U1 418 aa6.35□□□□□ -1.39
CLIP1-206ENST00000535290 VSIG4Q9Y279 399 aa6.35□□□□□ -1.39
CLIP1-206ENST00000535290 UBE2J1Q9Y385 318 aaPredicted RBP6.35□□□□□ -1.39
CLIP1-206ENST00000535290 VPS13DQ5THJ4 4388 aa6.34□□□□□ -1.39
CLIP1-206ENST00000535290 TMEM120BA0PK00 339 aa6.34□□□□□ -1.39
CLIP1-206ENST00000535290 NCBP2LA6PVI3 153 aaKnown RBP6.34□□□□□ -1.39
CLIP1-206ENST00000535290 RRP9O43818 475 aaKnown RBP6.34□□□□□ -1.39
CLIP1-206ENST00000535290 EIF4EBP3O60516 100 aaPredicted RBP6.34□□□□□ -1.39
CLIP1-206ENST00000535290 ZNF682O95780 498 aa6.34□□□□□ -1.39
CLIP1-206ENST00000535290 IGLV1-51P01701 117 aa6.34□□□□□ -1.39
CLIP1-206ENST00000535290 OR8U9P0C7N5 309 aa6.34□□□□□ -1.39
CLIP1-206ENST00000535290 CLUP10909 449 aa6.34□□□□□ -1.39
CLIP1-206ENST00000535290 VDAC1P21796 283 aa6.34□□□□□ -1.39
CLIP1-206ENST00000535290 KIR3DL2P43630 455 aa6.34□□□□□ -1.39
CLIP1-206ENST00000535290 MAP2K3P46734 347 aa6.34□□□□□ -1.39
CLIP1-206ENST00000535290 PRRX1P54821 245 aa6.34□□□□□ -1.39
CLIP1-206ENST00000535290 CYLC2Q14093 348 aaPredicted RBP6.34□□□□□ -1.39
CLIP1-206ENST00000535290 IFI44LQ53G44 452 aa6.34□□□□□ -1.39
CLIP1-206ENST00000535290 LINC00322Q6ZN03 302 aaPredicted RBP6.34□□□□□ -1.39
CLIP1-206ENST00000535290 ANGPTL5Q86XS5 388 aa6.34□□□□□ -1.39
CLIP1-206ENST00000535290 ZNF573Q86YE8 665 aa6.34□□□□□ -1.39
CLIP1-206ENST00000535290 FAM86B1Q8N7N1 296 aa6.34□□□□□ -1.39
CLIP1-206ENST00000535290 Q8N9W7 124 aa6.34□□□□□ -1.39
CLIP1-206ENST00000535290 OR8J3Q8NGG0 315 aa6.34□□□□□ -1.39
CLIP1-206ENST00000535290 OR52J3Q8NH60 311 aa6.34□□□□□ -1.39
CLIP1-206ENST00000535290 SH3GL1Q99961 368 aa6.34□□□□□ -1.39
CLIP1-206ENST00000535290 OR51J1Q9H342 316 aa6.34□□□□□ -1.39
CLIP1-206ENST00000535290 RABEP2Q9H5N1 569 aa6.34□□□□□ -1.39
CLIP1-206ENST00000535290 LIN7CQ9NUP9 197 aaKnown RBP6.34□□□□□ -1.39
CLIP1-206ENST00000535290 FAM53CQ9NYF3 392 aa6.34□□□□□ -1.39
CLIP1-206ENST00000535290 DNAJB9Q9UBS3 223 aa6.34□□□□□ -1.39
CLIP1-206ENST00000535290 SLC7A11Q9UPY5 501 aa6.34□□□□□ -1.39
CLIP1-206ENST00000535290 POLDIP2Q9Y2S7 368 aa6.34□□□□□ -1.39
CLIP1-206ENST00000535290 CEPT1Q9Y6K0 416 aa6.34□□□□□ -1.39
CLIP1-206ENST00000535290 ENPP4Q9Y6X5 453 aa6.34□□□□□ -1.39
CLIP1-206ENST00000535290 A0A087X0M5 115 aa6.33□□□□□ -1.4
CLIP1-206ENST00000535290 IGHV3-72A0A0B4J1Y9 119 aa6.33□□□□□ -1.4
CLIP1-206ENST00000535290 A0A1B0GVY2 172 aa6.33□□□□□ -1.4
CLIP1-206ENST00000535290 A0A1B0GX30 115 aa6.33□□□□□ -1.4
CLIP1-206ENST00000535290 PQLC2LA1A4F0 135 aa6.33□□□□□ -1.4
CLIP1-206ENST00000535290 NUPR2A6NF83 97 aa6.33□□□□□ -1.4
CLIP1-206ENST00000535290 LINC01619G3V211 115 aa6.33□□□□□ -1.4
CLIP1-206ENST00000535290 IGHV3-7P01780 117 aa6.33□□□□□ -1.4
CLIP1-206ENST00000535290 H2BFMP0C1H6 154 aa6.33□□□□□ -1.4
CLIP1-206ENST00000535290 GABRR1P24046 479 aa6.33□□□□□ -1.4
CLIP1-206ENST00000535290 MPZP25189 248 aa6.33□□□□□ -1.4
CLIP1-206ENST00000535290 PEX2P28328 305 aa6.33□□□□□ -1.4
CLIP1-206ENST00000535290 P2RX3P56373 397 aa6.33□□□□□ -1.4
CLIP1-206ENST00000535290 CEMP1Q6PRD7 247 aaPredicted RBP6.33□□□□□ -1.4
CLIP1-206ENST00000535290 FKBP9P1Q75LS8 142 aa6.33□□□□□ -1.4
CLIP1-206ENST00000535290 ASRGL1Q7L266 308 aa6.33□□□□□ -1.4
CLIP1-206ENST00000535290 CYP4Z1Q86W10 505 aa6.33□□□□□ -1.4
CLIP1-206ENST00000535290 SLC37A3Q8NCC5 494 aa6.33□□□□□ -1.4
CLIP1-206ENST00000535290 OR2T12Q8NG77 320 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms