RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 ANGPTL5Q86XS5 388 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 TRAPPC5Q8IUR0 188 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 OR4N5Q8IXE1 308 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 STX19Q8N4C7 294 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 CLDN22Q8N7P3 220 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.66□□□□□ -1.98
USP48-215ENST00000534705 OR4F6Q8NGB9 312 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 OR11H7Q8NGC8 314 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 OR1S1Q8NH92 325 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 OR5K1Q8NHB7 308 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 GPR151Q8TDV0 419 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 ZNF431Q8TF32 576 aaPredicted RBP2.66□□□□□ -1.98
USP48-215ENST00000534705 FGF11Q92914 225 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 PNPLA2Q96AD5 504 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 UPRTQ96BW1 309 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 LRRC58Q96CX6 371 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 CCDC126Q96EE4 140 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 MALSU1Q96EH3 234 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 ZNF514Q96K75 400 aaPredicted RBP2.66□□□□□ -1.98
USP48-215ENST00000534705 PANX1Q96RD7 426 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 RBBP8Q99708 897 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 KIR3DX1Q9H7L2 352 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 NIT2Q9NQR4 276 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 TECRQ9NZ01 308 aaKnown RBP2.66□□□□□ -1.98
USP48-215ENST00000534705 ADA2Q9NZK5 511 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 KLRF1Q9NZS2 232 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 PDP1Q9P0J1 537 aaPredicted RBP2.66□□□□□ -1.98
USP48-215ENST00000534705 ZNF581Q9P0T4 197 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 GALPQ9UBC7 116 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 GNG12Q9UBI6 72 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 PISDQ9UG56 409 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 C3orf18Q9UK00 162 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 IKZF3Q9UKT9 509 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 FZR1Q9UM11 496 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 ING4Q9UNL4 249 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 ABCG2Q9UNQ0 655 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 BTRCQ9Y297 605 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 LSM2Q9Y333 95 aaKnown RBP2.66□□□□□ -1.98
USP48-215ENST00000534705 ZNF462Q96JM2 2506 aa2.66□□□□□ -1.98
USP48-215ENST00000534705 UTP20O75691 2785 aaKnown RBP2.66□□□□□ -1.98
USP48-215ENST00000534705 ICE1Q9Y2F5 2266 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 HEATR5AQ86XA9 2040 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 A0A1W2PPV9 198 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 COLCA2A8K830 154 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 IQCF5A8MTL0 148 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 HMSDA8MTL9 139 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 NPIPA7E9PJI5 369 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 ZNF670-ZNF695F2Z2N8 137 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 INMT-MINDY4F8WBC2 141 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 SMLR1H3BR10 107 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 RPL36A-HNRNPH2H7BZ11 118 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 H7C417 338 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 K7ENP7 123 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 FOXE1O00358 373 aaPredicted RBP2.65□□□□□ -1.99
USP48-215ENST00000534705 PDCD5O14737 125 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 SH2D1BO14796 132 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 BCKDKO14874 412 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 NBR2O15453 112 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 DUX1O43812 170 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 ORC5O43913 435 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 KIAA0513O60268 411 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 SCN2BO60939 215 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 SH3BGRLO75368 114 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 AQP8O94778 261 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 ATG12O94817 140 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 OR2A4O95047 310 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 NSA2O95478 260 aaKnown RBP2.65□□□□□ -1.99
USP48-215ENST00000534705 CLDN9O95484 217 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 IGHG1P01857 330 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 MBP02144 154 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 OPN1LWP04000 364 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 CRYBA1P05813 215 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 STSP08842 583 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 LINC00614P0C842 121 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 NPIPA8P0DM63 369 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 LIPCP11150 499 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 ERGP11308 486 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 PIPP12273 146 aaPredicted RBP2.65□□□□□ -1.99
USP48-215ENST00000534705 ANXA3P12429 323 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 GABRA1P14867 456 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 FOLR1P15328 257 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 HIST1H1BP16401 226 aaKnown RBP2.65□□□□□ -1.99
USP48-215ENST00000534705 RCC1P18754 421 aaPredicted RBP2.65□□□□□ -1.99
USP48-215ENST00000534705 GGT1P19440 569 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 NPR2P20594 1047 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 OGNP20774 298 aaKnown RBP2.65□□□□□ -1.99
USP48-215ENST00000534705 PSMB9P28065 219 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 CCR7P32248 378 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 BTCP35070 178 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 CD79BP40259 229 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 NSG1P42857 185 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 CRYBB2P43320 205 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 KCNJ3P48549 501 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 RBP2P50120 134 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 NUTF2P61970 127 aaKnown RBP2.65□□□□□ -1.99
USP48-215ENST00000534705 LSM3P62310 102 aaKnown RBP2.65□□□□□ -1.99
USP48-215ENST00000534705 RAB11AP62491 216 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 MRPS11P82912 194 aaKnown RBP2.65□□□□□ -1.99
USP48-215ENST00000534705 NAAAQ02083 359 aa2.65□□□□□ -1.99
USP48-215ENST00000534705 LIPEQ05469 1076 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms