RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 ETV1P50549 477 aa24.72■■□□□ 1.55
SSSCA1-207ENST00000533115 GTF2A1P52655 376 aaPredicted RBP24.72■■□□□ 1.55
SSSCA1-207ENST00000533115 ADARB1P78563 741 aaKnown RBP24.72■■□□□ 1.55
SSSCA1-207ENST00000533115 GDPD3Q7L5L3 318 aa24.72■■□□□ 1.55
SSSCA1-207ENST00000533115 RNF144BQ7Z419 303 aa24.72■■□□□ 1.55
SSSCA1-207ENST00000533115 SERPINA12Q8IW75 414 aa24.72■■□□□ 1.55
SSSCA1-207ENST00000533115 OR8H2Q8N162 312 aa24.72■■□□□ 1.55
SSSCA1-207ENST00000533115 DHRSXQ8N5I4 330 aa24.72■■□□□ 1.55
SSSCA1-207ENST00000533115 SETD9Q8NE22 299 aa24.72■■□□□ 1.55
SSSCA1-207ENST00000533115 OR5D14Q8NGL3 314 aa24.72■■□□□ 1.55
SSSCA1-207ENST00000533115 HEXA-AS1Q9H8Q6 139 aa24.72■■□□□ 1.55
SSSCA1-207ENST00000533115 TMEM82A0PJX8 343 aa24.71■■□□□ 1.55
SSSCA1-207ENST00000533115 GPR137BO60478 399 aa24.71■■□□□ 1.55
SSSCA1-207ENST00000533115 ALX3O95076 343 aa24.71■■□□□ 1.55
SSSCA1-207ENST00000533115 PRKACAP17612 351 aa24.71■■□□□ 1.55
SSSCA1-207ENST00000533115 RAG2P55895 527 aa24.71■■□□□ 1.55
SSSCA1-207ENST00000533115 EDDM3BP56851 147 aa24.71■■□□□ 1.55
SSSCA1-207ENST00000533115 RELBQ01201 579 aa24.71■■□□□ 1.55
SSSCA1-207ENST00000533115 ZNF146Q15072 292 aa24.71■■□□□ 1.55
SSSCA1-207ENST00000533115 MIDNQ504T8 468 aa24.71■■□□□ 1.55
SSSCA1-207ENST00000533115 PARP16Q8N5Y8 322 aa24.71■■□□□ 1.55
SSSCA1-207ENST00000533115 SGMS2Q8NHU3 365 aa24.71■■□□□ 1.55
SSSCA1-207ENST00000533115 TSEN15Q8WW01 171 aaKnown RBP24.71■■□□□ 1.55
SSSCA1-207ENST00000533115 IGKV1-12A0A0C4DH73 117 aa24.7■■□□□ 1.54
SSSCA1-207ENST00000533115 NDUFA7O95182 113 aa24.7■■□□□ 1.54
SSSCA1-207ENST00000533115 IGKV1D-12P01611 117 aa24.7■■□□□ 1.54
SSSCA1-207ENST00000533115 CALCBP10092 127 aa24.7■■□□□ 1.54
SSSCA1-207ENST00000533115 DUSP1P28562 367 aa24.7■■□□□ 1.54
SSSCA1-207ENST00000533115 ERVFRD-1P60508 538 aa24.7■■□□□ 1.54
SSSCA1-207ENST00000533115 TAF9Q16594 264 aa24.7■■□□□ 1.54
SSSCA1-207ENST00000533115 CCDC58Q4VC31 144 aa24.7■■□□□ 1.54
SSSCA1-207ENST00000533115 SPIN3Q5JUX0 258 aa24.7■■□□□ 1.54
SSSCA1-207ENST00000533115 TMPRSS11AQ6ZMR5 421 aa24.7■■□□□ 1.54
SSSCA1-207ENST00000533115 C17orf107Q6ZR85 190 aa24.7■■□□□ 1.54
SSSCA1-207ENST00000533115 OR4F5Q8NH21 305 aa24.7■■□□□ 1.54
SSSCA1-207ENST00000533115 BEX1Q9HBH7 125 aa24.7■■□□□ 1.54
SSSCA1-207ENST00000533115 HMG20AQ9NP66 347 aa24.7■■□□□ 1.54
SSSCA1-207ENST00000533115 GLS2Q9UI32 602 aa24.7■■□□□ 1.54
SSSCA1-207ENST00000533115 A0A1B0GUS0 222 aa24.69■■□□□ 1.54
SSSCA1-207ENST00000533115 BTBD17A6NE02 478 aa24.69■■□□□ 1.54
SSSCA1-207ENST00000533115 SULT1B1O43704 296 aa24.69■■□□□ 1.54
SSSCA1-207ENST00000533115 KDM4BO94953 1096 aa24.69■■□□□ 1.54
SSSCA1-207ENST00000533115 DLX6P56179 175 aa24.69■■□□□ 1.54
SSSCA1-207ENST00000533115 IL18R1Q13478 541 aa24.69■■□□□ 1.54
SSSCA1-207ENST00000533115 RPL22L1Q6P5R6 122 aaKnown RBP24.69■■□□□ 1.54
SSSCA1-207ENST00000533115 CRIP3Q6Q6R5 217 aa24.69■■□□□ 1.54
SSSCA1-207ENST00000533115 OR5D18Q8NGL1 313 aa24.69■■□□□ 1.54
SSSCA1-207ENST00000533115 DIMT1Q9UNQ2 313 aaKnown RBP24.69■■□□□ 1.54
SSSCA1-207ENST00000533115 C17orf98A8MV24 154 aa24.68■■□□□ 1.54
SSSCA1-207ENST00000533115 ANKRD65E5RJM6 399 aa24.68■■□□□ 1.54
SSSCA1-207ENST00000533115 HCKP08631 526 aa24.68■■□□□ 1.54
SSSCA1-207ENST00000533115 GABRR1P24046 479 aa24.68■■□□□ 1.54
SSSCA1-207ENST00000533115 SNU13P55769 128 aaKnown RBP24.68■■□□□ 1.54
SSSCA1-207ENST00000533115 OGFRL1Q5TC84 451 aaPredicted RBP24.68■■□□□ 1.54
SSSCA1-207ENST00000533115 OR2G6Q5TZ20 316 aa24.68■■□□□ 1.54
SSSCA1-207ENST00000533115 GDPGP1Q6ZNW5 385 aa24.68■■□□□ 1.54
SSSCA1-207ENST00000533115 SAXO1Q8IYX7 474 aa24.68■■□□□ 1.54
SSSCA1-207ENST00000533115 BEND2Q8NDZ0 799 aa24.68■■□□□ 1.54
SSSCA1-207ENST00000533115 OR52N4Q8NGI2 321 aa24.68■■□□□ 1.54
SSSCA1-207ENST00000533115 C17orf50Q8WW18 174 aa24.68■■□□□ 1.54
SSSCA1-207ENST00000533115 VPREB3Q9UKI3 123 aa24.68■■□□□ 1.54
SSSCA1-207ENST00000533115 CASQ2O14958 399 aaPredicted RBP24.67■■□□□ 1.54
SSSCA1-207ENST00000533115 PSPNO60542 156 aa24.67■■□□□ 1.54
SSSCA1-207ENST00000533115 MYL12AP19105 171 aa24.67■■□□□ 1.54
SSSCA1-207ENST00000533115 MEF2CQ06413 473 aaPredicted RBP24.67■■□□□ 1.54
SSSCA1-207ENST00000533115 EDDM3AQ14507 147 aa24.67■■□□□ 1.54
SSSCA1-207ENST00000533115 CDK5R1Q15078 307 aa24.67■■□□□ 1.54
SSSCA1-207ENST00000533115 GRK1Q15835 563 aa24.67■■□□□ 1.54
SSSCA1-207ENST00000533115 XAF1Q6GPH4 301 aa24.67■■□□□ 1.54
SSSCA1-207ENST00000533115 RGP1Q92546 391 aaPredicted RBP24.67■■□□□ 1.54
SSSCA1-207ENST00000533115 CHST6Q9GZX3 395 aa24.67■■□□□ 1.54
SSSCA1-207ENST00000533115 SLITRK2Q9H156 845 aa24.67■■□□□ 1.54
SSSCA1-207ENST00000533115 RHOFQ9HBH0 211 aa24.67■■□□□ 1.54
SSSCA1-207ENST00000533115 GSTK1Q9Y2Q3 226 aa24.67■■□□□ 1.54
SSSCA1-207ENST00000533115 EXOSC1Q9Y3B2 195 aaKnown RBP24.67■■□□□ 1.54
SSSCA1-207ENST00000533115 HSPE1-MOB4S4R3N1 261 aa24.67■■□□□ 1.54
SSSCA1-207ENST00000533115 ZNF728P0DKX0 622 aa24.66■■□□□ 1.54
SSSCA1-207ENST00000533115 COX7A1P24310 79 aa24.66■■□□□ 1.54
SSSCA1-207ENST00000533115 KISS1Q15726 138 aa24.66■■□□□ 1.54
SSSCA1-207ENST00000533115 ZNF782Q6ZMW2 699 aaPredicted RBP24.66■■□□□ 1.54
SSSCA1-207ENST00000533115 ZSCAN4Q8NAM6 433 aaPredicted RBP24.66■■□□□ 1.54
SSSCA1-207ENST00000533115 OR5R1Q8NH85 324 aa24.66■■□□□ 1.54
SSSCA1-207ENST00000533115 RPS4Y2Q8TD47 263 aa24.66■■□□□ 1.54
SSSCA1-207ENST00000533115 TMEM80Q96HE8 168 aa24.66■■□□□ 1.54
SSSCA1-207ENST00000533115 AJUBAQ96IF1 538 aa24.66■■□□□ 1.54
SSSCA1-207ENST00000533115 DSCAML1Q8TD84 2053 aa24.65■■□□□ 1.54
SSSCA1-207ENST00000533115 hADV38S2A0JD32 116 aa24.65■■□□□ 1.54
SSSCA1-207ENST00000533115 MEX3AA1L020 520 aaKnown RBP24.65■■□□□ 1.54
SSSCA1-207ENST00000533115 SH2D1BO14796 132 aa24.65■■□□□ 1.54
SSSCA1-207ENST00000533115 RBP4P02753 201 aa24.65■■□□□ 1.54
SSSCA1-207ENST00000533115 CAPGP40121 348 aa24.65■■□□□ 1.54
SSSCA1-207ENST00000533115 OR4S1Q8NGB4 309 aa24.65■■□□□ 1.54
SSSCA1-207ENST00000533115 PPP1R35Q8TAP8 253 aa24.65■■□□□ 1.54
SSSCA1-207ENST00000533115 GPR148Q8TDV2 347 aa24.65■■□□□ 1.54
SSSCA1-207ENST00000533115 EXOSC4Q9NPD3 245 aaKnown RBP24.65■■□□□ 1.54
SSSCA1-207ENST00000533115 BABAM2Q9NXR7 383 aa24.65■■□□□ 1.54
SSSCA1-207ENST00000533115 MGST3O14880 152 aa24.64■■□□□ 1.54
SSSCA1-207ENST00000533115 RAB3AP20336 220 aa24.64■■□□□ 1.54
SSSCA1-207ENST00000533115 SOX2P48431 317 aa24.64■■□□□ 1.54
SSSCA1-207ENST00000533115 BMXP51813 675 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms