RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 HAND1O96004 215 aa14.05□□□□□ -0.16
PHRF1-204ENST00000532550 MT-ND2P03891 347 aa14.05□□□□□ -0.16
PHRF1-204ENST00000532550 PRKACAP17612 351 aa14.05□□□□□ -0.16
PHRF1-204ENST00000532550 GABRR1P24046 479 aa14.05□□□□□ -0.16
PHRF1-204ENST00000532550 PEX2P28328 305 aa14.05□□□□□ -0.16
PHRF1-204ENST00000532550 OR8H2Q8N162 312 aa14.05□□□□□ -0.16
PHRF1-204ENST00000532550 RFT1Q96AA3 541 aa14.05□□□□□ -0.16
PHRF1-204ENST00000532550 FGF20Q9NP95 211 aaPredicted RBP14.05□□□□□ -0.16
PHRF1-204ENST00000532550 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.05□□□□□ -0.16
PHRF1-204ENST00000532550 VPREB3Q9UKI3 123 aa14.05□□□□□ -0.16
PHRF1-204ENST00000532550 DHDHQ9UQ10 334 aa14.05□□□□□ -0.16
PHRF1-204ENST00000532550 hADV38S2A0JD32 116 aa14.04□□□□□ -0.16
PHRF1-204ENST00000532550 TMEM82A0PJX8 343 aa14.04□□□□□ -0.16
PHRF1-204ENST00000532550 C17orf98A8MV24 154 aa14.04□□□□□ -0.16
PHRF1-204ENST00000532550 E9PI62 339 aa14.04□□□□□ -0.16
PHRF1-204ENST00000532550 SH2D1BO14796 132 aa14.04□□□□□ -0.16
PHRF1-204ENST00000532550 WBP4O75554 376 aaKnown RBP14.04□□□□□ -0.16
PHRF1-204ENST00000532550 ZFPL1O95159 310 aa14.04□□□□□ -0.16
PHRF1-204ENST00000532550 ZNF728P0DKX0 622 aa14.04□□□□□ -0.16
PHRF1-204ENST00000532550 CALCBP10092 127 aa14.04□□□□□ -0.16
PHRF1-204ENST00000532550 COX7A1P24310 79 aa14.04□□□□□ -0.16
PHRF1-204ENST00000532550 DCKP27707 260 aa14.04□□□□□ -0.16
PHRF1-204ENST00000532550 DUSP1P28562 367 aa14.04□□□□□ -0.16
PHRF1-204ENST00000532550 TGFBR2P37173 567 aa14.04□□□□□ -0.16
PHRF1-204ENST00000532550 SNU13P55769 128 aaKnown RBP14.04□□□□□ -0.16
PHRF1-204ENST00000532550 MEF2CQ06413 473 aaPredicted RBP14.04□□□□□ -0.16
PHRF1-204ENST00000532550 ZNF146Q15072 292 aa14.04□□□□□ -0.16
PHRF1-204ENST00000532550 GRK1Q15835 563 aa14.04□□□□□ -0.16
PHRF1-204ENST00000532550 SMN1Q16637 294 aaKnown RBP14.04□□□□□ -0.16
PHRF1-204ENST00000532550 SPIN3Q5JUX0 258 aa14.04□□□□□ -0.16
PHRF1-204ENST00000532550 TTC23Q5W5X9 447 aa14.04□□□□□ -0.16
PHRF1-204ENST00000532550 DHRS7BQ6IAN0 325 aaPredicted RBP14.04□□□□□ -0.16
PHRF1-204ENST00000532550 ZNF782Q6ZMW2 699 aaPredicted RBP14.04□□□□□ -0.16
PHRF1-204ENST00000532550 PPP1R35Q8TAP8 253 aa14.04□□□□□ -0.16
PHRF1-204ENST00000532550 TSEN15Q8WW01 171 aaKnown RBP14.04□□□□□ -0.16
PHRF1-204ENST00000532550 CYGBQ8WWM9 190 aa14.04□□□□□ -0.16
PHRF1-204ENST00000532550 SPACA5Q96QH8 159 aa14.04□□□□□ -0.16
PHRF1-204ENST00000532550 SSX3Q99909 188 aa14.04□□□□□ -0.16
PHRF1-204ENST00000532550 PDCD1LG2Q9BQ51 273 aa14.04□□□□□ -0.16
PHRF1-204ENST00000532550 MEGF9Q9H1U4 602 aa14.04□□□□□ -0.16
PHRF1-204ENST00000532550 ZNF696Q9H7X3 374 aa14.04□□□□□ -0.16
PHRF1-204ENST00000532550 C8orf4Q9NR00 106 aa14.04□□□□□ -0.16
PHRF1-204ENST00000532550 IL36RNQ9UBH0 155 aa14.04□□□□□ -0.16
PHRF1-204ENST00000532550 RNF114Q9Y508 228 aa14.04□□□□□ -0.16
PHRF1-204ENST00000532550 DSCAML1Q8TD84 2053 aa14.03□□□□□ -0.16
PHRF1-204ENST00000532550 IRGMA1A4Y4 181 aa14.03□□□□□ -0.16
PHRF1-204ENST00000532550 ALX3O95076 343 aa14.03□□□□□ -0.16
PHRF1-204ENST00000532550 HCKP08631 526 aa14.03□□□□□ -0.16
PHRF1-204ENST00000532550 LIMS3P0CW19 117 aa14.03□□□□□ -0.16
PHRF1-204ENST00000532550 LIMS4P0CW20 117 aa14.03□□□□□ -0.16
PHRF1-204ENST00000532550 EDDM3AQ14507 147 aa14.03□□□□□ -0.16
PHRF1-204ENST00000532550 ZNF691Q5VV52 312 aa14.03□□□□□ -0.16
PHRF1-204ENST00000532550 TMPRSS11AQ6ZMR5 421 aa14.03□□□□□ -0.16
PHRF1-204ENST00000532550 PACRGLQ8N7B6 248 aa14.03□□□□□ -0.16
PHRF1-204ENST00000532550 OR52N4Q8NGI2 321 aa14.03□□□□□ -0.16
PHRF1-204ENST00000532550 OR13D1Q8NGV5 346 aa14.03□□□□□ -0.16
PHRF1-204ENST00000532550 LINC01006Q8NI28 216 aa14.03□□□□□ -0.16
PHRF1-204ENST00000532550 C17orf50Q8WW18 174 aa14.03□□□□□ -0.16
PHRF1-204ENST00000532550 RHOFQ9HBH0 211 aa14.03□□□□□ -0.16
PHRF1-204ENST00000532550 HMG20AQ9NP66 347 aa14.03□□□□□ -0.16
PHRF1-204ENST00000532550 GSTK1Q9Y2Q3 226 aa14.03□□□□□ -0.16
PHRF1-204ENST00000532550 PCDHGB5Q9Y5G0 923 aa14.03□□□□□ -0.16
PHRF1-204ENST00000532550 MGAM2Q2M2H8 2515 aa14.03□□□□□ -0.16
PHRF1-204ENST00000532550 MEX3AA1L020 520 aaKnown RBP14.02□□□□□ -0.17
PHRF1-204ENST00000532550 H3BUX3 64 aa14.02□□□□□ -0.17
PHRF1-204ENST00000532550 SULT1B1O43704 296 aa14.02□□□□□ -0.17
PHRF1-204ENST00000532550 CLIC3O95833 236 aa14.02□□□□□ -0.17
PHRF1-204ENST00000532550 RBP4P02753 201 aa14.02□□□□□ -0.17
PHRF1-204ENST00000532550 TMEM225BP0DP42 221 aa14.02□□□□□ -0.17
PHRF1-204ENST00000532550 GTF2A1P52655 376 aaPredicted RBP14.02□□□□□ -0.17
PHRF1-204ENST00000532550 DLX6P56179 175 aa14.02□□□□□ -0.17
PHRF1-204ENST00000532550 PRR31Q5SQ13 230 aa14.02□□□□□ -0.17
PHRF1-204ENST00000532550 Q6ZSV7 163 aa14.02□□□□□ -0.17
PHRF1-204ENST00000532550 SAXO1Q8IYX7 474 aa14.02□□□□□ -0.17
PHRF1-204ENST00000532550 DHRSXQ8N5I4 330 aa14.02□□□□□ -0.17
PHRF1-204ENST00000532550 PARP16Q8N5Y8 322 aa14.02□□□□□ -0.17
PHRF1-204ENST00000532550 SETD9Q8NE22 299 aa14.02□□□□□ -0.17
PHRF1-204ENST00000532550 OR5D18Q8NGL1 313 aa14.02□□□□□ -0.17
PHRF1-204ENST00000532550 CNIH3Q8TBE1 160 aa14.02□□□□□ -0.17
PHRF1-204ENST00000532550 ZNF714Q96N38 554 aa14.02□□□□□ -0.17
PHRF1-204ENST00000532550 JAM3Q9BX67 310 aa14.02□□□□□ -0.17
PHRF1-204ENST00000532550 CHST6Q9GZX3 395 aa14.02□□□□□ -0.17
PHRF1-204ENST00000532550 EXOSC4Q9NPD3 245 aaKnown RBP14.02□□□□□ -0.17
PHRF1-204ENST00000532550 KIAA2026Q5HYC2 2103 aa14.02□□□□□ -0.17
PHRF1-204ENST00000532550 IGKV1-12A0A0C4DH73 117 aa14.01□□□□□ -0.17
PHRF1-204ENST00000532550 SIRPB1O00241 398 aa14.01□□□□□ -0.17
PHRF1-204ENST00000532550 MGST3O14880 152 aa14.01□□□□□ -0.17
PHRF1-204ENST00000532550 MAGEB3O15480 346 aa14.01□□□□□ -0.17
PHRF1-204ENST00000532550 PSPNO60542 156 aa14.01□□□□□ -0.17
PHRF1-204ENST00000532550 KDM4BO94953 1096 aa14.01□□□□□ -0.17
PHRF1-204ENST00000532550 IGKV1D-12P01611 117 aa14.01□□□□□ -0.17
PHRF1-204ENST00000532550 MYL12AP19105 171 aa14.01□□□□□ -0.17
PHRF1-204ENST00000532550 ETV1P50549 477 aa14.01□□□□□ -0.17
PHRF1-204ENST00000532550 BMXP51813 675 aa14.01□□□□□ -0.17
PHRF1-204ENST00000532550 RCN1Q15293 331 aa14.01□□□□□ -0.17
PHRF1-204ENST00000532550 KISS1Q15726 138 aa14.01□□□□□ -0.17
PHRF1-204ENST00000532550 AANATQ16613 207 aa14.01□□□□□ -0.17
PHRF1-204ENST00000532550 LRRC75BQ2VPJ9 315 aa14.01□□□□□ -0.17
PHRF1-204ENST00000532550 CCDC58Q4VC31 144 aa14.01□□□□□ -0.17
PHRF1-204ENST00000532550 RPL22L1Q6P5R6 122 aaKnown RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms