RNA–Protein interactions for RNA: ENST00000532504.5

PPFIA1-222, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 1 (best)

Gene PPFIA1, Length 5,159 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-222ENST00000532504 SUB1P53999 127 aaKnown RBP eCLIP13.67□□□□□ -0.22
PPFIA1-222ENST00000532504 CLDN18P56856 261 aa13.67□□□□□ -0.22
PPFIA1-222ENST00000532504 NANOS3P60323 173 aaKnown RBP13.67□□□□□ -0.22
PPFIA1-222ENST00000532504 SPRR3Q9UBC9 169 aa13.67□□□□□ -0.22
PPFIA1-222ENST00000532504 FOXD3Q9UJU5 478 aaPredicted RBP13.67□□□□□ -0.22
PPFIA1-222ENST00000532504 CHST5Q9GZS9 411 aa13.66□□□□□ -0.22
PPFIA1-222ENST00000532504 ADAM11O75078 769 aa13.66□□□□□ -0.22
PPFIA1-222ENST00000532504 LALBAP00709 142 aa13.66□□□□□ -0.22
PPFIA1-222ENST00000532504 KRASP01116 189 aa13.66□□□□□ -0.22
PPFIA1-222ENST00000532504 HBG1P69891 147 aa13.66□□□□□ -0.22
PPFIA1-222ENST00000532504 HBG2P69892 147 aa13.66□□□□□ -0.22
PPFIA1-222ENST00000532504 GK2Q14410 553 aaPredicted RBP13.66□□□□□ -0.22
PPFIA1-222ENST00000532504 CTF1Q16619 201 aa13.66□□□□□ -0.22
PPFIA1-222ENST00000532504 ELP2Q6IA86 826 aa13.66□□□□□ -0.22
PPFIA1-222ENST00000532504 TPRX1Q8N7U7 411 aa13.66□□□□□ -0.22
PPFIA1-222ENST00000532504 KLF14Q8TD94 323 aaPredicted RBP13.66□□□□□ -0.22
PPFIA1-222ENST00000532504 ZNF705EA8MWA4 302 aaPredicted RBP13.66□□□□□ -0.22
PPFIA1-222ENST00000532504 GNLYP22749 145 aa13.66□□□□□ -0.22
PPFIA1-222ENST00000532504 NKX2-1P43699 371 aaPredicted RBP13.66□□□□□ -0.22
PPFIA1-222ENST00000532504 LYSMD2Q8IV50 215 aa13.66□□□□□ -0.22
PPFIA1-222ENST00000532504 I3L521 148 aa13.66□□□□□ -0.22
PPFIA1-222ENST00000532504 SMAD7O15105 426 aaKnown RBP13.66□□□□□ -0.22
PPFIA1-222ENST00000532504 FCGR3BO75015 233 aa13.66□□□□□ -0.22
PPFIA1-222ENST00000532504 HOXB1P14653 301 aaPredicted RBP13.66□□□□□ -0.22
PPFIA1-222ENST00000532504 PDZK1IP1Q13113 114 aa13.66□□□□□ -0.22
PPFIA1-222ENST00000532504 SNAI3Q3KNW1 292 aa13.66□□□□□ -0.22
PPFIA1-222ENST00000532504 MOB1BQ7L9L4 216 aa13.66□□□□□ -0.22
PPFIA1-222ENST00000532504 OR4C16Q8NGL9 310 aa13.66□□□□□ -0.22
PPFIA1-222ENST00000532504 WNT5BQ9H1J7 359 aa13.66□□□□□ -0.22
PPFIA1-222ENST00000532504 TUBG1P23258 451 aa13.65□□□□□ -0.22
PPFIA1-222ENST00000532504 SEMA5BQ9P283 1151 aa13.65□□□□□ -0.22
PPFIA1-222ENST00000532504 NLRC5Q86WI3 1866 aa13.65□□□□□ -0.22
PPFIA1-222ENST00000532504 A0A0B4J2A0 478 aa13.65□□□□□ -0.22
PPFIA1-222ENST00000532504 TSPAN15O95858 294 aa13.65□□□□□ -0.22
PPFIA1-222ENST00000532504 KIR3DL2P43630 455 aa13.65□□□□□ -0.22
PPFIA1-222ENST00000532504 SPANXN5Q5MJ07 72 aa13.65□□□□□ -0.22
PPFIA1-222ENST00000532504 NSUN5P2Q63ZY6 315 aa13.65□□□□□ -0.22
PPFIA1-222ENST00000532504 MYO7BQ6PIF6 2116 aa13.65□□□□□ -0.22
PPFIA1-222ENST00000532504 SHPKQ9UHJ6 478 aa13.65□□□□□ -0.22
PPFIA1-222ENST00000532504 CTAG2O75638 210 aa13.65□□□□□ -0.22
PPFIA1-222ENST00000532504 AADACP22760 399 aa13.65□□□□□ -0.22
PPFIA1-222ENST00000532504 FCN2Q15485 313 aa13.65□□□□□ -0.22
PPFIA1-222ENST00000532504 SLC25A10Q9UBX3 287 aaPredicted RBP13.65□□□□□ -0.22
PPFIA1-222ENST00000532504 SPTBN1Q01082 2364 aaKnown RBP13.65□□□□□ -0.22
PPFIA1-222ENST00000532504 LRRC3CA6NJW4 275 aa13.65□□□□□ -0.22
PPFIA1-222ENST00000532504 SOCS1O15524 211 aa13.65□□□□□ -0.22
PPFIA1-222ENST00000532504 TMEM11P17152 192 aa13.65□□□□□ -0.22
PPFIA1-222ENST00000532504 PTBP1P26599 531 aaKnown RBP eCLIP13.65□□□□□ -0.221e-7■■□□□ 13.2
PPFIA1-222ENST00000532504 AESQ08117 197 aa13.65□□□□□ -0.22
PPFIA1-222ENST00000532504 TIMM23BQ5SRD1 257 aa13.65□□□□□ -0.22
PPFIA1-222ENST00000532504 WDR13Q9H1Z4 485 aa13.65□□□□□ -0.22
PPFIA1-222ENST00000532504 OR2D2Q9H210 308 aa13.65□□□□□ -0.22
PPFIA1-222ENST00000532504 MDH2P40926 338 aaKnown RBP13.64□□□□□ -0.23
PPFIA1-222ENST00000532504 RAP2BP61225 183 aa13.64□□□□□ -0.23
PPFIA1-222ENST00000532504 SP6Q3SY56 376 aa13.64□□□□□ -0.23
PPFIA1-222ENST00000532504 PEAR1Q5VY43 1037 aaPredicted RBP13.64□□□□□ -0.23
PPFIA1-222ENST00000532504 C17orf107Q6ZR85 190 aa13.64□□□□□ -0.23
PPFIA1-222ENST00000532504 S100A7AQ86SG5 101 aa13.64□□□□□ -0.23
PPFIA1-222ENST00000532504 C10orf35Q96D05 121 aa13.64□□□□□ -0.23
PPFIA1-222ENST00000532504 PERPQ96FX8 193 aa13.64□□□□□ -0.23
PPFIA1-222ENST00000532504 SLC17A5Q9NRA2 495 aa13.64□□□□□ -0.23
PPFIA1-222ENST00000532504 TMEM210A6NLX4 147 aa13.64□□□□□ -0.23
PPFIA1-222ENST00000532504 SULT1C2O00338 296 aa13.64□□□□□ -0.23
PPFIA1-222ENST00000532504 IAPPP10997 89 aa13.64□□□□□ -0.23
PPFIA1-222ENST00000532504 CEACAM3P40198 252 aa13.64□□□□□ -0.23
PPFIA1-222ENST00000532504 PLA2G7Q13093 441 aa13.64□□□□□ -0.23
PPFIA1-222ENST00000532504 SLC25A30Q5SVS4 291 aa13.64□□□□□ -0.23
PPFIA1-222ENST00000532504 RPL31P62899 125 aaKnown RBP13.64□□□□□ -0.23
PPFIA1-222ENST00000532504 NAAAQ02083 359 aa13.64□□□□□ -0.23
PPFIA1-222ENST00000532504 VMA21Q3ZAQ7 101 aa13.64□□□□□ -0.23
PPFIA1-222ENST00000532504 GPX8Q8TED1 209 aa13.64□□□□□ -0.23
PPFIA1-222ENST00000532504 NPAS1Q99742 590 aa13.64□□□□□ -0.23
PPFIA1-222ENST00000532504 MAGT1Q9H0U3 335 aa13.64□□□□□ -0.23
PPFIA1-222ENST00000532504 SMPD2O60906 423 aa13.64□□□□□ -0.23
PPFIA1-222ENST00000532504 DYRK2Q92630 601 aa13.64□□□□□ -0.23
PPFIA1-222ENST00000532504 ZNF837Q96EG3 531 aaPredicted RBP13.64□□□□□ -0.23
PPFIA1-222ENST00000532504 RRAS2P62070 204 aaPredicted RBP13.63□□□□□ -0.23
PPFIA1-222ENST00000532504 BSPH1Q075Z2 132 aa13.63□□□□□ -0.23
PPFIA1-222ENST00000532504 NOXA1Q86UR1 476 aa13.63□□□□□ -0.23
PPFIA1-222ENST00000532504 GVQW1Q8N7I0 195 aa13.63□□□□□ -0.23
PPFIA1-222ENST00000532504 DEDD2Q8WXF8 326 aa13.63□□□□□ -0.23
PPFIA1-222ENST00000532504 TSNAXQ99598 290 aaKnown RBP13.63□□□□□ -0.23
PPFIA1-222ENST00000532504 RANGRFQ9HD47 186 aaPredicted RBP13.63□□□□□ -0.23
PPFIA1-222ENST00000532504 WIPI2Q9Y4P8 454 aa13.63□□□□□ -0.23
PPFIA1-222ENST00000532504 F2RL2O00254 374 aa13.63□□□□□ -0.23
PPFIA1-222ENST00000532504 CYB5R3P00387 301 aaPredicted RBP13.63□□□□□ -0.23
PPFIA1-222ENST00000532504 ERHP84090 104 aaKnown RBP13.63□□□□□ -0.23
PPFIA1-222ENST00000532504 IGFBP7Q16270 282 aa13.63□□□□□ -0.23
PPFIA1-222ENST00000532504 GLRX5Q86SX6 157 aa13.63□□□□□ -0.23
PPFIA1-222ENST00000532504 TAAR6Q96RI8 345 aa13.63□□□□□ -0.23
PPFIA1-222ENST00000532504 NPTNQ9Y639 398 aa13.63□□□□□ -0.23
PPFIA1-222ENST00000532504 OR2F2O95006 317 aa13.63□□□□□ -0.23
PPFIA1-222ENST00000532504 RALGAPA1Q6GYQ0 2036 aa13.63□□□□□ -0.23
PPFIA1-222ENST00000532504 GPR31O00270 319 aa13.63□□□□□ -0.23
PPFIA1-222ENST00000532504 CECR9P0C854 216 aa13.63□□□□□ -0.23
PPFIA1-222ENST00000532504 PRDX2P32119 198 aa13.63□□□□□ -0.23
PPFIA1-222ENST00000532504 ETV6P41212 452 aa13.63□□□□□ -0.23
PPFIA1-222ENST00000532504 C1orf174Q8IYL3 243 aa13.63□□□□□ -0.23
PPFIA1-222ENST00000532504 HSD17B11Q8NBQ5 300 aa13.63□□□□□ -0.23
PPFIA1-222ENST00000532504 SMIM4Q8WVI0 70 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms