RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-223ENST00000532370 BAMBIQ13145 260 aa14.3□□□□□ -0.12
CTSB-223ENST00000532370 KLRD1Q13241 179 aa14.3□□□□□ -0.12
CTSB-223ENST00000532370 TMEM200BQ69YZ2 307 aa14.3□□□□□ -0.12
CTSB-223ENST00000532370 IZUMO2Q6UXV1 221 aa14.3□□□□□ -0.12
CTSB-223ENST00000532370 Q8IYB0 196 aa14.3□□□□□ -0.12
CTSB-223ENST00000532370 KIR3DL3Q8N743 410 aa14.3□□□□□ -0.12
CTSB-223ENST00000532370 NANOGP1Q8N7R0 232 aa14.3□□□□□ -0.12
CTSB-223ENST00000532370 ASCC1Q8N9N2 400 aaKnown RBP14.3□□□□□ -0.12
CTSB-223ENST00000532370 TMEM106AQ96A25 262 aa14.3□□□□□ -0.12
CTSB-223ENST00000532370 DMRTB1Q96MA1 342 aa14.3□□□□□ -0.12
CTSB-223ENST00000532370 JMJD8Q96S16 334 aa14.3□□□□□ -0.12
CTSB-223ENST00000532370 NEK6Q9HC98 313 aa14.3□□□□□ -0.12
CTSB-223ENST00000532370 TRBV23-1A0A0A0MS06 115 aa14.29□□□□□ -0.12
CTSB-223ENST00000532370 A0A1W2PRD5 423 aa14.29□□□□□ -0.12
CTSB-223ENST00000532370 A0A1W2PRF3 423 aa14.29□□□□□ -0.12
CTSB-223ENST00000532370 A0A1W2PRM7 423 aa14.29□□□□□ -0.12
CTSB-223ENST00000532370 DNAJC9-AS1A6NH13 148 aa14.29□□□□□ -0.12
CTSB-223ENST00000532370 TRIM77I1YAP6 450 aa14.29□□□□□ -0.12
CTSB-223ENST00000532370 KDM4BO94953 1096 aa14.29□□□□□ -0.12
CTSB-223ENST00000532370 CDK1P06493 297 aa14.29□□□□□ -0.12
CTSB-223ENST00000532370 TMEM225BP0DP42 221 aa14.29□□□□□ -0.12
CTSB-223ENST00000532370 RAB3AP20336 220 aa14.29□□□□□ -0.12
CTSB-223ENST00000532370 MYF6P23409 242 aa14.29□□□□□ -0.12
CTSB-223ENST00000532370 VHLP40337 213 aa14.29□□□□□ -0.12
CTSB-223ENST00000532370 ERVFRD-1P60508 538 aa14.29□□□□□ -0.12
CTSB-223ENST00000532370 SATL1Q86VE3 508 aa14.29□□□□□ -0.12
CTSB-223ENST00000532370 CMTM4Q8IZR5 234 aa14.29□□□□□ -0.12
CTSB-223ENST00000532370 PIP4P2Q8N4L2 257 aa14.29□□□□□ -0.12
CTSB-223ENST00000532370 OR52N4Q8NGI2 321 aa14.29□□□□□ -0.12
CTSB-223ENST00000532370 TNFRSF14Q92956 283 aa14.29□□□□□ -0.12
CTSB-223ENST00000532370 ANKRD60Q9BZ19 345 aa14.29□□□□□ -0.12
CTSB-223ENST00000532370 HMG20AQ9NP66 347 aa14.29□□□□□ -0.12
CTSB-223ENST00000532370 PCDHGB5Q9Y5G0 923 aa14.29□□□□□ -0.12
CTSB-223ENST00000532370 TRBV5-5A0A0J9YX44 114 aa14.28□□□□□ -0.12
CTSB-223ENST00000532370 A0A1W2PPK0 400 aa14.28□□□□□ -0.12
CTSB-223ENST00000532370 RNASEK-C17orf49H0YIS7 233 aa14.28□□□□□ -0.12
CTSB-223ENST00000532370 M0R1W7 72 aa14.28□□□□□ -0.12
CTSB-223ENST00000532370 MYL12BO14950 172 aa14.28□□□□□ -0.12
CTSB-223ENST00000532370 CD2P06729 351 aa14.28□□□□□ -0.12
CTSB-223ENST00000532370 HSPA13P48723 471 aa14.28□□□□□ -0.12
CTSB-223ENST00000532370 WNT4P56705 351 aa14.28□□□□□ -0.12
CTSB-223ENST00000532370 BPIFB3P59826 476 aa14.28□□□□□ -0.12
CTSB-223ENST00000532370 ZNF273Q14593 569 aa14.28□□□□□ -0.12
CTSB-223ENST00000532370 SLC9A3R2Q15599 337 aa14.28□□□□□ -0.12
CTSB-223ENST00000532370 C17orf107Q6ZR85 190 aa14.28□□□□□ -0.12
CTSB-223ENST00000532370 PNKDQ8N490 385 aa14.28□□□□□ -0.12
CTSB-223ENST00000532370 FAM216AQ8WUB2 273 aa14.28□□□□□ -0.12
CTSB-223ENST00000532370 ZFAND2BQ8WV99 257 aa14.28□□□□□ -0.12
CTSB-223ENST00000532370 CHST6Q9GZX3 395 aa14.28□□□□□ -0.12
CTSB-223ENST00000532370 FAM234AQ9H0X4 552 aa14.28□□□□□ -0.12
CTSB-223ENST00000532370 ERGIC3Q9Y282 383 aa14.28□□□□□ -0.12
CTSB-223ENST00000532370 GSTK1Q9Y2Q3 226 aa14.28□□□□□ -0.12
CTSB-223ENST00000532370 A0A0U1RQK1 487 aa14.27□□□□□ -0.13
CTSB-223ENST00000532370 PSPNO60542 156 aa14.27□□□□□ -0.13
CTSB-223ENST00000532370 CCL3L1P16619 93 aa14.27□□□□□ -0.13
CTSB-223ENST00000532370 CELP19835 753 aa14.27□□□□□ -0.13
CTSB-223ENST00000532370 PRTN3P24158 256 aa14.27□□□□□ -0.13
CTSB-223ENST00000532370 ZNF146Q15072 292 aa14.27□□□□□ -0.13
CTSB-223ENST00000532370 YIF1BQ5BJH7 314 aa14.27□□□□□ -0.13
CTSB-223ENST00000532370 C1orf122Q6ZSJ8 110 aa14.27□□□□□ -0.13
CTSB-223ENST00000532370 SAXO1Q8IYX7 474 aa14.27□□□□□ -0.13
CTSB-223ENST00000532370 C11orf42Q8N5U0 333 aa14.27□□□□□ -0.13
CTSB-223ENST00000532370 OR5M11Q96RB7 305 aa14.27□□□□□ -0.13
CTSB-223ENST00000532370 CDCA4Q9BXL8 241 aa14.27□□□□□ -0.13
CTSB-223ENST00000532370 METTL8Q9H825 291 aaKnown RBP14.27□□□□□ -0.13
CTSB-223ENST00000532370 SCN3BQ9NY72 215 aa14.27□□□□□ -0.13
CTSB-223ENST00000532370 MAGEA13PA6NCF6 341 aa14.26□□□□□ -0.13
CTSB-223ENST00000532370 SIRPB1O00241 398 aa14.26□□□□□ -0.13
CTSB-223ENST00000532370 GABRPO00591 440 aa14.26□□□□□ -0.13
CTSB-223ENST00000532370 HOXA3O43365 443 aaPredicted RBP14.26□□□□□ -0.13
CTSB-223ENST00000532370 GABRR1P24046 479 aa14.26□□□□□ -0.13
CTSB-223ENST00000532370 EDDM3BP56851 147 aa14.26□□□□□ -0.13
CTSB-223ENST00000532370 TAS2R43P59537 309 aa14.26□□□□□ -0.13
CTSB-223ENST00000532370 SLC35A2P78381 396 aa14.26□□□□□ -0.13
CTSB-223ENST00000532370 EDDM3AQ14507 147 aa14.26□□□□□ -0.13
CTSB-223ENST00000532370 RNLSQ5VYX0 342 aa14.26□□□□□ -0.13
CTSB-223ENST00000532370 HCP5Q6MZN7 132 aa14.26□□□□□ -0.13
CTSB-223ENST00000532370 FIP1L1Q6UN15 594 aaKnown RBP14.26□□□□□ -0.13
CTSB-223ENST00000532370 OR8H2Q8N162 312 aa14.26□□□□□ -0.13
CTSB-223ENST00000532370 TPRX1Q8N7U7 411 aa14.26□□□□□ -0.13
CTSB-223ENST00000532370 ZSCAN4Q8NAM6 433 aaPredicted RBP14.26□□□□□ -0.13
CTSB-223ENST00000532370 OR4S1Q8NGB4 309 aa14.26□□□□□ -0.13
CTSB-223ENST00000532370 TNFAIP8L1Q8WVP5 186 aa14.26□□□□□ -0.13
CTSB-223ENST00000532370 TAF15Q92804 592 aaKnown RBP eCLIP14.26□□□□□ -0.13
CTSB-223ENST00000532370 MYDGFQ969H8 173 aa14.26□□□□□ -0.13
CTSB-223ENST00000532370 ZDHHC16Q969W1 377 aa14.26□□□□□ -0.13
CTSB-223ENST00000532370 SNX22Q96L94 193 aa14.26□□□□□ -0.13
CTSB-223ENST00000532370 OR14A2Q96R54 314 aa14.26□□□□□ -0.13
CTSB-223ENST00000532370 GPER1Q99527 375 aa14.26□□□□□ -0.13
CTSB-223ENST00000532370 PRDM13Q9H4Q3 707 aa14.26□□□□□ -0.13
CTSB-223ENST00000532370 SEBOXQ9HB31 216 aaPredicted RBP14.26□□□□□ -0.13
CTSB-223ENST00000532370 TNFRSF19Q9NS68 423 aa14.26□□□□□ -0.13
CTSB-223ENST00000532370 LSM2Q9Y333 95 aaKnown RBP14.26□□□□□ -0.13
CTSB-223ENST00000532370 TRAV8-7A0A075B6U6 113 aa14.25□□□□□ -0.13
CTSB-223ENST00000532370 TRBV5-7A0A0A0MS05 114 aa14.25□□□□□ -0.13
CTSB-223ENST00000532370 MAGEB3O15480 346 aa14.25□□□□□ -0.13
CTSB-223ENST00000532370 OR2H2O95918 312 aa14.25□□□□□ -0.13
CTSB-223ENST00000532370 IGFBP3P17936 291 aaPredicted RBP14.25□□□□□ -0.13
CTSB-223ENST00000532370 OR3A4PP47883 348 aa14.25□□□□□ -0.13
CTSB-223ENST00000532370 PPP3R1P63098 170 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms