RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, human

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN1-222	ENST00000532285	KLRD1	Q13241	179 aa		18.82	■□□□□ 0.6
CAPN1-222	ENST00000532285	ZNF146	Q15072	292 aa		18.82	■□□□□ 0.6
CAPN1-222	ENST00000532285	SAXO1	Q8IYX7	474 aa		18.82	■□□□□ 0.6
CAPN1-222	ENST00000532285	FBLIM1	Q8WUP2	373 aa		18.82	■□□□□ 0.6
CAPN1-222	ENST00000532285	SSMEM1	Q8WWF3	244 aa		18.82	■□□□□ 0.6
CAPN1-222	ENST00000532285	TFAP2C	Q92754	450 aa		18.82	■□□□□ 0.6
CAPN1-222	ENST00000532285	PLCXD1	Q9NUJ7	323 aa		18.82	■□□□□ 0.6
CAPN1-222	ENST00000532285	POMT1	Q9Y6A1	747 aa		18.82	■□□□□ 0.6
CAPN1-222	ENST00000532285	hCG_1809904	A0A1W2PP81	198 aa		18.81	■□□□□ 0.6
CAPN1-222	ENST00000532285		A0A1W2PPE2	198 aa		18.81	■□□□□ 0.6
CAPN1-222	ENST00000532285		A0A1W2PR64	198 aa		18.81	■□□□□ 0.6
CAPN1-222	ENST00000532285		A0A1W2PRV1	198 aa		18.81	■□□□□ 0.6
CAPN1-222	ENST00000532285	NPFF	O15130	113 aa		18.81	■□□□□ 0.6
CAPN1-222	ENST00000532285	HAND1	O96004	215 aa		18.81	■□□□□ 0.6
CAPN1-222	ENST00000532285	CD2	P06729	351 aa		18.81	■□□□□ 0.6
CAPN1-222	ENST00000532285	PRKACA	P17612	351 aa		18.81	■□□□□ 0.6
CAPN1-222	ENST00000532285	KISS1	Q15726	138 aa		18.81	■□□□□ 0.6
CAPN1-222	ENST00000532285	SPIN3	Q5JUX0	258 aa		18.81	■□□□□ 0.6
CAPN1-222	ENST00000532285	LAIR2	Q6ISS4	152 aa		18.81	■□□□□ 0.6
CAPN1-222	ENST00000532285	GDPD3	Q7L5L3	318 aa		18.81	■□□□□ 0.6
CAPN1-222	ENST00000532285	OR8H2	Q8N162	312 aa		18.81	■□□□□ 0.6
CAPN1-222	ENST00000532285	RGP1	Q92546	391 aa	Predicted RBP	18.81	■□□□□ 0.6
CAPN1-222	ENST00000532285	HMG20A	Q9NP66	347 aa		18.81	■□□□□ 0.6
CAPN1-222	ENST00000532285	IL36RN	Q9UBH0	155 aa		18.81	■□□□□ 0.6
CAPN1-222	ENST00000532285	PSORS1C1	Q9UIG5	152 aa		18.81	■□□□□ 0.6
CAPN1-222	ENST00000532285	HAX1	O00165	279 aa		18.8	■□□□□ 0.6
CAPN1-222	ENST00000532285	ANGPTL7	O43827	346 aa		18.8	■□□□□ 0.6
CAPN1-222	ENST00000532285	XPNPEP2	O43895	674 aa		18.8	■□□□□ 0.6
CAPN1-222	ENST00000532285	KDM4B	O94953	1096 aa		18.8	■□□□□ 0.6
CAPN1-222	ENST00000532285	RAB3A	P20336	220 aa		18.8	■□□□□ 0.6
CAPN1-222	ENST00000532285	AWAT1	Q58HT5	328 aa		18.8	■□□□□ 0.6
CAPN1-222	ENST00000532285	ZNF529	Q6P280	563 aa		18.8	■□□□□ 0.6
CAPN1-222	ENST00000532285	CRIP3	Q6Q6R5	217 aa		18.8	■□□□□ 0.6
CAPN1-222	ENST00000532285	C17orf107	Q6ZR85	190 aa		18.8	■□□□□ 0.6
CAPN1-222	ENST00000532285	RNF144B	Q7Z419	303 aa		18.8	■□□□□ 0.6
CAPN1-222	ENST00000532285	LDLRAD3	Q86YD5	345 aa		18.8	■□□□□ 0.6
CAPN1-222	ENST00000532285	C3orf56	Q8N813	242 aa		18.8	■□□□□ 0.6
CAPN1-222	ENST00000532285	ZSCAN4	Q8NAM6	433 aa	Predicted RBP	18.8	■□□□□ 0.6
CAPN1-222	ENST00000532285	OR5D18	Q8NGL1	313 aa		18.8	■□□□□ 0.6
CAPN1-222	ENST00000532285	SMIM19	Q96E16	107 aa		18.8	■□□□□ 0.6
CAPN1-222	ENST00000532285	CPNE2	Q96FN4	548 aa	Predicted RBP	18.8	■□□□□ 0.6
CAPN1-222	ENST00000532285	ZNF281	Q9Y2X9	895 aa		18.8	■□□□□ 0.6
CAPN1-222	ENST00000532285	SF3B6	Q9Y3B4	125 aa	Known RBP	18.8	■□□□□ 0.6
CAPN1-222	ENST00000532285	SIRT4	Q9Y6E7	314 aa	Predicted RBP	18.8	■□□□□ 0.6
CAPN1-222	ENST00000532285	IGKV1-12	A0A0C4DH73	117 aa		18.79	■□□□□ 0.6
CAPN1-222	ENST00000532285		A0A1W2PRD5	423 aa		18.79	■□□□□ 0.6
CAPN1-222	ENST00000532285		A0A1W2PRF3	423 aa		18.79	■□□□□ 0.6
CAPN1-222	ENST00000532285		A0A1W2PRM7	423 aa		18.79	■□□□□ 0.6
CAPN1-222	ENST00000532285	TMEM82	A0PJX8	343 aa		18.79	■□□□□ 0.6
CAPN1-222	ENST00000532285	MAGEB3	O15480	346 aa		18.79	■□□□□ 0.6
CAPN1-222	ENST00000532285	IGKV1D-12	P01611	117 aa		18.79	■□□□□ 0.6
CAPN1-222	ENST00000532285	FBP1	P09467	338 aa		18.79	■□□□□ 0.6
CAPN1-222	ENST00000532285	CFP	P27918	469 aa		18.79	■□□□□ 0.6
CAPN1-222	ENST00000532285	SOX2	P48431	317 aa		18.79	■□□□□ 0.6
CAPN1-222	ENST00000532285	ACSM1	Q08AH1	577 aa		18.79	■□□□□ 0.6
CAPN1-222	ENST00000532285	STX19	Q8N4C7	294 aa		18.79	■□□□□ 0.6
CAPN1-222	ENST00000532285	HEXA-AS1	Q9H8Q6	139 aa		18.79	■□□□□ 0.6
CAPN1-222	ENST00000532285	TNFRSF19	Q9NS68	423 aa		18.79	■□□□□ 0.6
CAPN1-222	ENST00000532285	PCDHGB5	Q9Y5G0	923 aa		18.79	■□□□□ 0.6
CAPN1-222	ENST00000532285		H0YJX3	145 aa		18.78	■□□□□ 0.6
CAPN1-222	ENST00000532285	SH2D1B	O14796	132 aa		18.78	■□□□□ 0.6
CAPN1-222	ENST00000532285	LALBA	P00709	142 aa		18.78	■□□□□ 0.6
CAPN1-222	ENST00000532285	TMEM225B	P0DP42	221 aa		18.78	■□□□□ 0.6
CAPN1-222	ENST00000532285	CALCB	P10092	127 aa		18.78	■□□□□ 0.6
CAPN1-222	ENST00000532285	GABRR1	P24046	479 aa		18.78	■□□□□ 0.6
CAPN1-222	ENST00000532285	DUSP1	P28562	367 aa		18.78	■□□□□ 0.6
CAPN1-222	ENST00000532285	SAA4	P35542	130 aa		18.78	■□□□□ 0.6
CAPN1-222	ENST00000532285	IER3	P46695	156 aa		18.78	■□□□□ 0.6
CAPN1-222	ENST00000532285	EDDM3B	P56851	147 aa		18.78	■□□□□ 0.6
CAPN1-222	ENST00000532285	ZP1	P60852	638 aa		18.78	■□□□□ 0.6
CAPN1-222	ENST00000532285	MEF2C	Q06413	473 aa	Predicted RBP	18.78	■□□□□ 0.6
CAPN1-222	ENST00000532285	ZNF273	Q14593	569 aa		18.78	■□□□□ 0.6
CAPN1-222	ENST00000532285	DMKN	Q6E0U4	476 aa	Predicted RBP	18.78	■□□□□ 0.6
CAPN1-222	ENST00000532285	HCP5	Q6MZN7	132 aa		18.78	■□□□□ 0.6
CAPN1-222	ENST00000532285	C11orf42	Q8N5U0	333 aa		18.78	■□□□□ 0.6
CAPN1-222	ENST00000532285	ZNF485	Q8NCK3	441 aa		18.78	■□□□□ 0.6
CAPN1-222	ENST00000532285	BPIFB6	Q8NFQ5	453 aa		18.78	■□□□□ 0.6
CAPN1-222	ENST00000532285	TMEM106A	Q96A25	262 aa		18.78	■□□□□ 0.6
CAPN1-222	ENST00000532285	CHIA	Q9BZP6	476 aa		18.78	■□□□□ 0.6
CAPN1-222	ENST00000532285	DPAGT1	Q9H3H5	408 aa		18.78	■□□□□ 0.6
CAPN1-222	ENST00000532285	MEIOC	A2RUB1	952 aa		18.77	■□□□□ 0.6
CAPN1-222	ENST00000532285	CCL3L1	P16619	93 aa		18.77	■□□□□ 0.6
CAPN1-222	ENST00000532285	SNU13	P55769	128 aa	Known RBP	18.77	■□□□□ 0.6
CAPN1-222	ENST00000532285	GRK1	Q15835	563 aa		18.77	■□□□□ 0.6
CAPN1-222	ENST00000532285	MIDN	Q504T8	468 aa		18.77	■□□□□ 0.6
CAPN1-222	ENST00000532285	AHSA2	Q719I0	299 aa		18.77	■□□□□ 0.6
CAPN1-222	ENST00000532285	PNKD	Q8N490	385 aa		18.77	■□□□□ 0.6
CAPN1-222	ENST00000532285	OR52N4	Q8NGI2	321 aa		18.77	■□□□□ 0.6
CAPN1-222	ENST00000532285	PPP1R35	Q8TAP8	253 aa		18.77	■□□□□ 0.6
CAPN1-222	ENST00000532285	NRG4	Q8WWG1	115 aa		18.77	■□□□□ 0.6
CAPN1-222	ENST00000532285	GHSR	Q92847	366 aa		18.77	■□□□□ 0.6
CAPN1-222	ENST00000532285	EXOSC4	Q9NPD3	245 aa	Known RBP	18.77	■□□□□ 0.6
CAPN1-222	ENST00000532285	GSTK1	Q9Y2Q3	226 aa		18.77	■□□□□ 0.6
CAPN1-222	ENST00000532285	FAM181B	A6NEQ2	426 aa		18.76	■□□□□ 0.59
CAPN1-222	ENST00000532285	ERICH4	A6NGS2	130 aa		18.76	■□□□□ 0.59
CAPN1-222	ENST00000532285	PSPN	O60542	156 aa		18.76	■□□□□ 0.59
CAPN1-222	ENST00000532285	PAH	P00439	452 aa		18.76	■□□□□ 0.59
CAPN1-222	ENST00000532285	IGHV4-59	P01825	116 aa		18.76	■□□□□ 0.59
CAPN1-222	ENST00000532285	CRYBA1	P05813	215 aa		18.76	■□□□□ 0.59
CAPN1-222	ENST00000532285	DLX6	P56179	175 aa		18.76	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 24 ms