RNA–Protein interactions for RNA: ENST00000530983.5

VPS28-213, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 2,337 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-213ENST00000530983 AKR1C3P42330 323 aa16.7■□□□□ 0.26
VPS28-213ENST00000530983 B3GALT5-AS1P59052 145 aa16.7■□□□□ 0.26
VPS28-213ENST00000530983 RAC3P60763 192 aa16.7■□□□□ 0.26
VPS28-213ENST00000530983 ABCA11PQ4W5N1 156 aa16.7■□□□□ 0.26
VPS28-213ENST00000530983 FAM76BQ5HYJ3 339 aa16.7■□□□□ 0.26
VPS28-213ENST00000530983 LHFPL2Q6ZUX7 228 aa16.7■□□□□ 0.26
VPS28-213ENST00000530983 RPS19BP1Q86WX3 136 aaKnown RBP16.7■□□□□ 0.26
VPS28-213ENST00000530983 IFI44Q8TCB0 444 aa16.7■□□□□ 0.26
VPS28-213ENST00000530983 HIST1H2BAQ96A08 127 aa16.7■□□□□ 0.26
VPS28-213ENST00000530983 NSG2Q9Y328 171 aa16.7■□□□□ 0.26
VPS28-213ENST00000530983 KLK3P07288 261 aaPredicted RBP16.69■□□□□ 0.26
VPS28-213ENST00000530983 ZNF32P17041 273 aa16.69■□□□□ 0.26
VPS28-213ENST00000530983 KRTAP27-1Q3LI81 207 aa16.69■□□□□ 0.26
VPS28-213ENST00000530983 PHLDA2Q53GA4 152 aa16.69■□□□□ 0.26
VPS28-213ENST00000530983 SLC22A25Q6T423 547 aa16.69■□□□□ 0.26
VPS28-213ENST00000530983 C15orf54Q8N8G6 183 aa16.69■□□□□ 0.26
VPS28-213ENST00000530983 LRTM2Q8N967 370 aa16.69■□□□□ 0.26
VPS28-213ENST00000530983 ALKBH3Q96Q83 286 aaPredicted RBP16.69■□□□□ 0.26
VPS28-213ENST00000530983 SEBOXQ9HB31 216 aaPredicted RBP16.69■□□□□ 0.26
VPS28-213ENST00000530983 SLC2A9Q9NRM0 540 aa16.69■□□□□ 0.26
VPS28-213ENST00000530983 FREM2Q5SZK8 3169 aa16.69■□□□□ 0.26
VPS28-213ENST00000530983 DIRAS3O95661 229 aa16.69■□□□□ 0.26
VPS28-213ENST00000530983 NRASP01111 189 aa16.69■□□□□ 0.26
VPS28-213ENST00000530983 GLI4P10075 376 aa16.69■□□□□ 0.26
VPS28-213ENST00000530983 MLF1P58340 268 aa16.69■□□□□ 0.26
VPS28-213ENST00000530983 FBXL14Q8N1E6 418 aa16.69■□□□□ 0.26
VPS28-213ENST00000530983 AGBL5Q8NDL9 886 aa16.69■□□□□ 0.26
VPS28-213ENST00000530983 AKR1E2Q96JD6 320 aa16.69■□□□□ 0.26
VPS28-213ENST00000530983 C18orf12Q96KH6 178 aa16.69■□□□□ 0.26
VPS28-213ENST00000530983 WFDC1Q9HC57 220 aa16.69■□□□□ 0.26
VPS28-213ENST00000530983 CACFD1Q9UGQ2 172 aa16.69■□□□□ 0.26
VPS28-213ENST00000530983 A0A0G2JMM0 328 aa16.68■□□□□ 0.26
VPS28-213ENST00000530983 A0A1W2PPB8 328 aa16.68■□□□□ 0.26
VPS28-213ENST00000530983 A0A1W2PRS3 328 aa16.68■□□□□ 0.26
VPS28-213ENST00000530983 GJE1A6NN92 205 aa16.68■□□□□ 0.26
VPS28-213ENST00000530983 KIR3DP1A8MWS1 328 aa16.68■□□□□ 0.26
VPS28-213ENST00000530983 XRCC2O43543 280 aa16.68■□□□□ 0.26
VPS28-213ENST00000530983 S100A6P06703 90 aa16.68■□□□□ 0.26
VPS28-213ENST00000530983 Q6ZPA2 131 aa16.68■□□□□ 0.26
VPS28-213ENST00000530983 OSR2Q8N2R0 312 aa16.68■□□□□ 0.26
VPS28-213ENST00000530983 SECTM1Q8WVN6 248 aa16.68■□□□□ 0.26
VPS28-213ENST00000530983 SUCNR1Q9BXA5 334 aa16.68■□□□□ 0.26
VPS28-213ENST00000530983 STARD10Q9Y365 291 aa16.68■□□□□ 0.26
VPS28-213ENST00000530983 TNRC6BQ9UPQ9 1833 aaKnown RBP16.68■□□□□ 0.26
VPS28-213ENST00000530983 ZNF716A6NP11 495 aa16.68■□□□□ 0.26
VPS28-213ENST00000530983 H7C1Q1 480 aa16.68■□□□□ 0.26
VPS28-213ENST00000530983 DNPH1O43598 174 aa16.68■□□□□ 0.26
VPS28-213ENST00000530983 CCL4P13236 92 aa16.68■□□□□ 0.26
VPS28-213ENST00000530983 HTR5AP47898 357 aa16.68■□□□□ 0.26
VPS28-213ENST00000530983 LIAT1Q6ZQX7 453 aa16.68■□□□□ 0.26
VPS28-213ENST00000530983 YRDCQ86U90 279 aaKnown RBP16.68■□□□□ 0.26
VPS28-213ENST00000530983 GGNQ86UU5 652 aa16.68■□□□□ 0.26
VPS28-213ENST00000530983 OR5L1Q8NGL2 311 aa16.68■□□□□ 0.26
VPS28-213ENST00000530983 MSI2Q96DH6 328 aaKnown RBP16.68■□□□□ 0.26
VPS28-213ENST00000530983 FAM212BQ9NTI7 297 aaPredicted RBP16.68■□□□□ 0.26
VPS28-213ENST00000530983 ZDHHC8Q9ULC8 765 aa16.68■□□□□ 0.26
VPS28-213ENST00000530983 PSG4Q00888 419 aa16.67■□□□□ 0.26
VPS28-213ENST00000530983 OR52M1Q8NGK5 317 aa16.67■□□□□ 0.26
VPS28-213ENST00000530983 OR2Y1Q8NGV0 311 aa16.67■□□□□ 0.26
VPS28-213ENST00000530983 OR11L1Q8NGX0 322 aa16.67■□□□□ 0.26
VPS28-213ENST00000530983 CPT1CQ8TCG5 803 aa16.67■□□□□ 0.26
VPS28-213ENST00000530983 BCO1Q9HAY6 547 aa16.67■□□□□ 0.26
VPS28-213ENST00000530983 MIOXQ9UGB7 285 aa16.67■□□□□ 0.26
VPS28-213ENST00000530983 ST3GAL6Q9Y274 331 aa16.67■□□□□ 0.26
VPS28-213ENST00000530983 TIMM10BQ9Y5J6 103 aa16.67■□□□□ 0.26
VPS28-213ENST00000530983 NSG1A0A0A6YYJ2 146 aa16.67■□□□□ 0.26
VPS28-213ENST00000530983 hCG_38984A0A1B0GV85 526 aa16.67■□□□□ 0.26
VPS28-213ENST00000530983 CCDC85CA6NKD9 419 aa16.67■□□□□ 0.26
VPS28-213ENST00000530983 ZNF92Q03936 586 aa16.67■□□□□ 0.26
VPS28-213ENST00000530983 PDCD1Q15116 288 aa16.67■□□□□ 0.26
VPS28-213ENST00000530983 FGFBP3Q8TAT2 258 aa16.67■□□□□ 0.26
VPS28-213ENST00000530983 SLC39A7Q92504 469 aa16.67■□□□□ 0.26
VPS28-213ENST00000530983 OR51M1Q9H341 326 aa16.67■□□□□ 0.26
VPS28-213ENST00000530983 IL36GQ9NZH8 169 aa16.67■□□□□ 0.26
VPS28-213ENST00000530983 SIT1Q9Y3P8 196 aa16.67■□□□□ 0.26
VPS28-213ENST00000530983 C9J4A7 227 aa16.66■□□□□ 0.26
VPS28-213ENST00000530983 SEC11BP0C7V7 166 aa16.66■□□□□ 0.26
VPS28-213ENST00000530983 DANCRP0C864 163 aa16.66■□□□□ 0.26
VPS28-213ENST00000530983 AGAP20933 346 aa16.66■□□□□ 0.26
VPS28-213ENST00000530983 SNCAP37840 140 aa16.66■□□□□ 0.26
VPS28-213ENST00000530983 FABP9Q0Z7S8 132 aa16.66■□□□□ 0.26
VPS28-213ENST00000530983 MIDNQ504T8 468 aa16.66■□□□□ 0.26
VPS28-213ENST00000530983 EDARADDQ8WWZ3 215 aa16.66■□□□□ 0.26
VPS28-213ENST00000530983 MOB3AQ96BX8 217 aa16.66■□□□□ 0.26
VPS28-213ENST00000530983 SCRT1Q9BWW7 348 aa16.66■□□□□ 0.26
VPS28-213ENST00000530983 BCL2L14Q9BZR8 327 aa16.66■□□□□ 0.26
VPS28-213ENST00000530983 WNT5BQ9H1J7 359 aa16.66■□□□□ 0.26
VPS28-213ENST00000530983 NME2P1O60361 137 aa16.65■□□□□ 0.26
VPS28-213ENST00000530983 GPR137BO60478 399 aa16.65■□□□□ 0.26
VPS28-213ENST00000530983 TSPAN15O95858 294 aa16.65■□□□□ 0.26
VPS28-213ENST00000530983 P2RY1P47900 373 aa16.65■□□□□ 0.26
VPS28-213ENST00000530983 CARD18P57730 90 aa16.65■□□□□ 0.26
VPS28-213ENST00000530983 TGIF1Q15583 401 aa16.65■□□□□ 0.26
VPS28-213ENST00000530983 ZNF100Q8IYN0 542 aa16.65■□□□□ 0.26
VPS28-213ENST00000530983 GINS3Q9BRX5 216 aa16.65■□□□□ 0.26
VPS28-213ENST00000530983 ZNF286AQ9HBT8 521 aa16.65■□□□□ 0.26
VPS28-213ENST00000530983 PILRBQ9UKJ0 227 aa16.65■□□□□ 0.26
VPS28-213ENST00000530983 SRD5A2P31213 254 aa16.65■□□□□ 0.26
VPS28-213ENST00000530983 FHITP49789 147 aa16.65■□□□□ 0.26
VPS28-213ENST00000530983 DAZAP2Q15038 168 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms