RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 ARR3P36575 388 aa14.85□□□□□ -0.03
BRCA2-204ENST00000530893 MAGEA5P43359 124 aa14.85□□□□□ -0.03
BRCA2-204ENST00000530893 GGNBP1Q5YKI7 109 aa14.85□□□□□ -0.03
BRCA2-204ENST00000530893 CALHM1Q8IU99 346 aa14.85□□□□□ -0.03
BRCA2-204ENST00000530893 TMED6Q8WW62 240 aa14.85□□□□□ -0.03
BRCA2-204ENST00000530893 TOMM40LQ969M1 308 aa14.85□□□□□ -0.03
BRCA2-204ENST00000530893 MOB3AQ96BX8 217 aa14.85□□□□□ -0.03
BRCA2-204ENST00000530893 PLSCR2Q9NRY7 297 aa14.85□□□□□ -0.03
BRCA2-204ENST00000530893 ZNF581Q9P0T4 197 aa14.85□□□□□ -0.03
BRCA2-204ENST00000530893 STARD10Q9Y365 291 aa14.85□□□□□ -0.03
BRCA2-204ENST00000530893 A0A1W2PNU3 283 aaPredicted RBP14.85□□□□□ -0.03
BRCA2-204ENST00000530893 K7EPK0 472 aa14.85□□□□□ -0.03
BRCA2-204ENST00000530893 CST4P01036 141 aa14.85□□□□□ -0.03
BRCA2-204ENST00000530893 FAM157CP0CG43 387 aa14.85□□□□□ -0.03
BRCA2-204ENST00000530893 FCGR2CP31995 323 aa14.85□□□□□ -0.03
BRCA2-204ENST00000530893 ZNF273Q14593 569 aa14.85□□□□□ -0.03
BRCA2-204ENST00000530893 TMEM187Q14656 261 aa14.85□□□□□ -0.03
BRCA2-204ENST00000530893 PXDC1Q5TGL8 231 aa14.85□□□□□ -0.03
BRCA2-204ENST00000530893 IL34Q6ZMJ4 242 aa14.85□□□□□ -0.03
BRCA2-204ENST00000530893 SLC25A26Q70HW3 274 aa14.85□□□□□ -0.03
BRCA2-204ENST00000530893 FAM71E2Q8N5Q1 922 aa14.85□□□□□ -0.03
BRCA2-204ENST00000530893 APH1AQ96BI3 265 aa14.85□□□□□ -0.03
BRCA2-204ENST00000530893 PRRG4Q9BZD6 226 aa14.85□□□□□ -0.03
BRCA2-204ENST00000530893 MS4A7Q9GZW8 240 aaPredicted RBP14.85□□□□□ -0.03
BRCA2-204ENST00000530893 ZNF442Q9H7R0 627 aa14.85□□□□□ -0.03
BRCA2-204ENST00000530893 CALHM2Q9HA72 323 aa14.85□□□□□ -0.03
BRCA2-204ENST00000530893 PLEKHA2Q9HB19 425 aa14.85□□□□□ -0.03
BRCA2-204ENST00000530893 LPAR3Q9UBY5 353 aa14.85□□□□□ -0.03
BRCA2-204ENST00000530893 TSPAN4O14817 238 aa14.84□□□□□ -0.03
BRCA2-204ENST00000530893 GAPDHP04406 335 aaKnown RBP14.84□□□□□ -0.03
BRCA2-204ENST00000530893 RPL12P30050 165 aaKnown RBP14.84□□□□□ -0.03
BRCA2-204ENST00000530893 RFC3P40938 356 aa14.84□□□□□ -0.03
BRCA2-204ENST00000530893 CEACAM21Q3KPI0 293 aa14.84□□□□□ -0.03
BRCA2-204ENST00000530893 TMEM251Q8N6I4 163 aa14.84□□□□□ -0.03
BRCA2-204ENST00000530893 CCDC71LQ8N9Z2 235 aa14.84□□□□□ -0.03
BRCA2-204ENST00000530893 OR56B2PQ8NGI1 322 aa14.84□□□□□ -0.03
BRCA2-204ENST00000530893 LRRC46Q96FV0 321 aa14.84□□□□□ -0.03
BRCA2-204ENST00000530893 MICU1Q9BPX6 476 aa14.84□□□□□ -0.03
BRCA2-204ENST00000530893 PAPOLGQ9BWT3 736 aaKnown RBP14.84□□□□□ -0.03
BRCA2-204ENST00000530893 MMP26Q9NRE1 261 aa14.84□□□□□ -0.03
BRCA2-204ENST00000530893 SLC2A9Q9NRM0 540 aa14.84□□□□□ -0.03
BRCA2-204ENST00000530893 FAM86C1Q9NVL1 165 aa14.84□□□□□ -0.03
BRCA2-204ENST00000530893 KLF13Q9Y2Y9 288 aaPredicted RBP14.84□□□□□ -0.03
BRCA2-204ENST00000530893 C5orf49A4QMS7 147 aa14.83□□□□□ -0.03
BRCA2-204ENST00000530893 SS18L1O75177 396 aaPredicted RBP14.83□□□□□ -0.03
BRCA2-204ENST00000530893 JTBO76095 146 aa14.83□□□□□ -0.03
BRCA2-204ENST00000530893 OR7C1O76099 320 aaPredicted RBP14.83□□□□□ -0.03
BRCA2-204ENST00000530893 MT-CO3P00414 261 aa14.83□□□□□ -0.03
BRCA2-204ENST00000530893 PLGLB1Q02325 96 aa14.83□□□□□ -0.03
BRCA2-204ENST00000530893 MRPL21Q7Z2W9 205 aaKnown RBP14.83□□□□□ -0.03
BRCA2-204ENST00000530893 DPPA2Q7Z7J5 298 aa14.83□□□□□ -0.03
BRCA2-204ENST00000530893 MRPL24Q96A35 216 aaKnown RBP14.83□□□□□ -0.03
BRCA2-204ENST00000530893 MARS2Q96GW9 593 aaKnown RBP14.83□□□□□ -0.03
BRCA2-204ENST00000530893 FER1L6-AS2Q96M78 137 aa14.83□□□□□ -0.03
BRCA2-204ENST00000530893 PRRX2Q99811 253 aa14.83□□□□□ -0.03
BRCA2-204ENST00000530893 HES7Q9BYE0 225 aa14.83□□□□□ -0.03
BRCA2-204ENST00000530893 TAF9BQ9HBM6 251 aa14.83□□□□□ -0.03
BRCA2-204ENST00000530893 TNRC6AQ8NDV7 1962 aaKnown RBP14.83□□□□□ -0.04
BRCA2-204ENST00000530893 TMEM218A2RU14 115 aa14.83□□□□□ -0.04
BRCA2-204ENST00000530893 FAM166BA8MTA8 275 aa14.83□□□□□ -0.04
BRCA2-204ENST00000530893 M0R296 226 aa14.83□□□□□ -0.04
BRCA2-204ENST00000530893 ACTL6AO96019 429 aa14.83□□□□□ -0.04
BRCA2-204ENST00000530893 OR5AC1P0C628 307 aa14.83□□□□□ -0.04
BRCA2-204ENST00000530893 FGF12P61328 243 aa14.83□□□□□ -0.04
BRCA2-204ENST00000530893 PRDX4Q13162 271 aa14.83□□□□□ -0.04
BRCA2-204ENST00000530893 LIAT1Q6ZQX7 453 aa14.83□□□□□ -0.04
BRCA2-204ENST00000530893 ZDHHC23Q8IYP9 409 aa14.83□□□□□ -0.04
BRCA2-204ENST00000530893 FAM185AQ8N0U4 392 aa14.83□□□□□ -0.04
BRCA2-204ENST00000530893 NAXEQ8NCW5 288 aa14.83□□□□□ -0.04
BRCA2-204ENST00000530893 NARS2Q96I59 477 aaKnown RBP14.83□□□□□ -0.04
BRCA2-204ENST00000530893 SMIM8Q96KF7 97 aa14.83□□□□□ -0.04
BRCA2-204ENST00000530893 RSRP1Q9BUV0 290 aa14.83□□□□□ -0.04
BRCA2-204ENST00000530893 ZC4H2Q9NQZ6 224 aa14.83□□□□□ -0.04
BRCA2-204ENST00000530893 COL6A3P12111 3177 aa14.82□□□□□ -0.04
BRCA2-204ENST00000530893 A0A096LPE4 126 aa14.82□□□□□ -0.04
BRCA2-204ENST00000530893 A0A1W2PPZ6 126 aa14.82□□□□□ -0.04
BRCA2-204ENST00000530893 E5RGE8 158 aa14.82□□□□□ -0.04
BRCA2-204ENST00000530893 KLRC4-KLRK1H3BQV0 150 aa14.82□□□□□ -0.04
BRCA2-204ENST00000530893 H7C1Q1 480 aa14.82□□□□□ -0.04
BRCA2-204ENST00000530893 NME2P1O60361 137 aa14.82□□□□□ -0.04
BRCA2-204ENST00000530893 ATG12O94817 140 aa14.82□□□□□ -0.04
BRCA2-204ENST00000530893 HLA-HP01893 362 aa14.82□□□□□ -0.04
BRCA2-204ENST00000530893 SP1P08047 785 aa14.82□□□□□ -0.04
BRCA2-204ENST00000530893 NME2P22392 152 aa14.82□□□□□ -0.04
BRCA2-204ENST00000530893 FXYD4P59646 89 aa14.82□□□□□ -0.04
BRCA2-204ENST00000530893 HERV-K104P61576 105 aa14.82□□□□□ -0.04
BRCA2-204ENST00000530893 DEFA5Q01523 94 aa14.82□□□□□ -0.04
BRCA2-204ENST00000530893 MPV17LQ2QL34 196 aa14.82□□□□□ -0.04
BRCA2-204ENST00000530893 BRICD5Q6PL45 260 aa14.82□□□□□ -0.04
BRCA2-204ENST00000530893 LGI3Q8N145 548 aa14.82□□□□□ -0.04
BRCA2-204ENST00000530893 DYRK2Q92630 601 aa14.82□□□□□ -0.04
BRCA2-204ENST00000530893 OR2S2Q9NQN1 319 aa14.82□□□□□ -0.04
BRCA2-204ENST00000530893 NSG2Q9Y328 171 aa14.82□□□□□ -0.04
BRCA2-204ENST00000530893 ZNF705EA8MWA4 302 aaPredicted RBP14.82□□□□□ -0.04
BRCA2-204ENST00000530893 CCNOP22674 350 aa14.82□□□□□ -0.04
BRCA2-204ENST00000530893 NPBWR2P48146 333 aa14.82□□□□□ -0.04
BRCA2-204ENST00000530893 PLP2Q04941 152 aa14.82□□□□□ -0.04
BRCA2-204ENST00000530893 DAZAP2Q15038 168 aaPredicted RBP14.82□□□□□ -0.04
BRCA2-204ENST00000530893 LINC00696Q6ZRV3 163 aa14.82□□□□□ -0.04
BRCA2-204ENST00000530893 MKXQ8IYA7 352 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms