RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 MAGEB4O15481 346 aaPredicted RBP2.74□□□□□ -1.97
C11orf88-204ENST00000529661 SLC22A5O76082 557 aa2.74□□□□□ -1.97
C11orf88-204ENST00000529661 RLN2P04090 185 aa2.74□□□□□ -1.97
C11orf88-204ENST00000529661 MMP7P09237 267 aaPredicted RBP2.74□□□□□ -1.97
C11orf88-204ENST00000529661 CELP19835 753 aa2.74□□□□□ -1.97
C11orf88-204ENST00000529661 DLX6P56179 175 aa2.74□□□□□ -1.97
C11orf88-204ENST00000529661 PFN3P60673 137 aa2.74□□□□□ -1.97
C11orf88-204ENST00000529661 REEP5Q00765 189 aa2.74□□□□□ -1.97
C11orf88-204ENST00000529661 IL5RAQ01344 420 aa2.74□□□□□ -1.97
C11orf88-204ENST00000529661 DR1Q01658 176 aa2.74□□□□□ -1.97
C11orf88-204ENST00000529661 MLLT11Q13015 90 aaPredicted RBP2.74□□□□□ -1.97
C11orf88-204ENST00000529661 SNRNP35Q16560 246 aaKnown RBP2.74□□□□□ -1.97
C11orf88-204ENST00000529661 TBC1D28Q2M2D7 210 aa2.74□□□□□ -1.97
C11orf88-204ENST00000529661 SLC25A35Q3KQZ1 300 aa2.74□□□□□ -1.97
C11orf88-204ENST00000529661 AKIRIN2Q53H80 203 aa2.74□□□□□ -1.97
C11orf88-204ENST00000529661 ACTBL2Q562R1 376 aa2.74□□□□□ -1.97
C11orf88-204ENST00000529661 TFDP3Q5H9I0 405 aa2.74□□□□□ -1.97
C11orf88-204ENST00000529661 ZNF684Q5T5D7 378 aa2.74□□□□□ -1.97
C11orf88-204ENST00000529661 FBXW9Q5XUX1 488 aa2.74□□□□□ -1.97
C11orf88-204ENST00000529661 NANOGP8Q6NSW7 305 aa2.74□□□□□ -1.97
C11orf88-204ENST00000529661 USP50Q70EL3 339 aaPredicted RBP2.74□□□□□ -1.97
C11orf88-204ENST00000529661 MTERF4Q7Z6M4 381 aaKnown RBP2.74□□□□□ -1.97
C11orf88-204ENST00000529661 WDFY1Q8IWB7 410 aa2.74□□□□□ -1.97
C11orf88-204ENST00000529661 C10orf67Q8IYJ2 551 aa2.74□□□□□ -1.97
C11orf88-204ENST00000529661 TTLQ8NG68 377 aa2.74□□□□□ -1.97
C11orf88-204ENST00000529661 OR5D18Q8NGL1 313 aa2.74□□□□□ -1.97
C11orf88-204ENST00000529661 SMIM19Q96E16 107 aa2.74□□□□□ -1.97
C11orf88-204ENST00000529661 TMEM56Q96MV1 263 aa2.74□□□□□ -1.97
C11orf88-204ENST00000529661 ZNF382Q96SR6 550 aa2.74□□□□□ -1.97
C11orf88-204ENST00000529661 GPR22Q99680 433 aa2.74□□□□□ -1.97
C11orf88-204ENST00000529661 TMEM243Q9BU79 118 aa2.74□□□□□ -1.97
C11orf88-204ENST00000529661 FGF23Q9GZV9 251 aaPredicted RBP2.74□□□□□ -1.97
C11orf88-204ENST00000529661 LHX5Q9H2C1 402 aa2.74□□□□□ -1.97
C11orf88-204ENST00000529661 MFSD1Q9H3U5 465 aa2.74□□□□□ -1.97
C11orf88-204ENST00000529661 WFDC1Q9HC57 220 aa2.74□□□□□ -1.97
C11orf88-204ENST00000529661 C12orf4Q9NQ89 552 aa2.74□□□□□ -1.97
C11orf88-204ENST00000529661 FBXO6Q9NRD1 293 aaPredicted RBP2.74□□□□□ -1.97
C11orf88-204ENST00000529661 RBM22Q9NW64 420 aaKnown RBP eCLIP2.74□□□□□ -1.97
C11orf88-204ENST00000529661 RAB22AQ9UL26 194 aa2.74□□□□□ -1.97
C11orf88-204ENST00000529661 SLC22A13Q9Y226 551 aa2.74□□□□□ -1.97
C11orf88-204ENST00000529661 LRRC42Q9Y546 428 aa2.74□□□□□ -1.97
C11orf88-204ENST00000529661 C9orf84Q5VXU9 1444 aa2.74□□□□□ -1.97
C11orf88-204ENST00000529661 ABCC11Q96J66 1382 aa2.74□□□□□ -1.97
C11orf88-204ENST00000529661 TTC21AQ8NDW8 1320 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 IGKV1-27A0A075B6S5 117 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 F5H5K5 113 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 H0YJW9 148 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 J3QT63 122 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 BET1O15155 118 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 BIRC5O15392 142 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 SSNA1O43805 119 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 GLSO94925 669 aaPredicted RBP2.73□□□□□ -1.97
C11orf88-204ENST00000529661 MRPL3P09001 348 aaKnown RBP2.73□□□□□ -1.97
C11orf88-204ENST00000529661 OR56A5P0C7T3 313 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 SLC2A1P11166 492 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 CXCR1P25024 350 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 GGT2P36268 569 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 PPP1R2P41236 205 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 TTPAP49638 278 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 RAP1GDS1P52306 607 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 TAS2R46P59540 309 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 MRPS25P82663 173 aaKnown RBP2.73□□□□□ -1.97
C11orf88-204ENST00000529661 CDK5Q00535 292 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 BAXQ07812 192 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 TSPAN31Q12999 210 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 PNOCQ13519 176 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 EBI3Q14213 229 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 CEACAM16Q2WEN9 425 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 SYPL2Q5VXT5 272 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 LPCAT4Q643R3 524 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 FAM71E1Q6IPT2 247 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 PPP1R2P3Q6NXS1 205 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 DNM1P34Q6PK57 102 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 STX12Q86Y82 276 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 ZNF695Q8IW36 515 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 HS3ST5Q8IZT8 346 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 C19orf18Q8NEA5 215 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 OR8K1Q8NGG5 319 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 OR5M1Q8NGP8 315 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 NELFBQ8WX92 580 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 RXFP2Q8WXD0 754 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 DDIT4LQ96D03 193 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 MRAP2Q96G30 205 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 C18orf15Q96N68 181 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 RILPQ96NA2 401 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 RBP7Q96R05 134 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 GGTLC1Q9BX51 225 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 UGT2B28Q9BY64 529 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 ARL6Q9H0F7 186 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 RHOFQ9HBH0 211 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 C8orf17Q9NRJ1 99 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 DNAJC27Q9NZQ0 273 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 COMMD9Q9P000 198 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 PRELID1Q9Y255 219 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 ZNF337Q9Y3M9 751 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 RFNGQ9Y644 331 aa2.73□□□□□ -1.97
C11orf88-204ENST00000529661 MIA3Q5JRA6 1907 aa2.72□□□□□ -1.97
C11orf88-204ENST00000529661 C5orf63A6NC05 138 aa2.72□□□□□ -1.97
C11orf88-204ENST00000529661 TMEM114B3SHH9 223 aa2.72□□□□□ -1.97
C11orf88-204ENST00000529661 CCRL2O00421 344 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms