RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 PPP5CP53041 499 aa6.96□□□□□ -1.3
SSBP3-212ENST00000528930 OR12D2P58182 307 aa6.96□□□□□ -1.3
SSBP3-212ENST00000528930 GNG3P63215 75 aa6.96□□□□□ -1.3
SSBP3-212ENST00000528930 DGUOKQ16854 277 aa6.96□□□□□ -1.3
SSBP3-212ENST00000528930 MICBQ29980 383 aa6.96□□□□□ -1.3
SSBP3-212ENST00000528930 ODF4Q2M2E3 257 aa6.96□□□□□ -1.3
SSBP3-212ENST00000528930 KRTAP19-4Q3LI73 84 aa6.96□□□□□ -1.3
SSBP3-212ENST00000528930 TP53I3Q53FA7 332 aa6.96□□□□□ -1.3
SSBP3-212ENST00000528930 ARMCX4Q5H9R4 360 aa6.96□□□□□ -1.3
SSBP3-212ENST00000528930 CLVS2Q5SYC1 327 aa6.96□□□□□ -1.3
SSBP3-212ENST00000528930 OLFML2AQ68BL7 652 aa6.96□□□□□ -1.3
SSBP3-212ENST00000528930 STUMQ69YW2 141 aa6.96□□□□□ -1.3
SSBP3-212ENST00000528930 BTNL3Q6UXE8 466 aa6.96□□□□□ -1.3
SSBP3-212ENST00000528930 ZNF788Q6ZQV5 615 aa6.96□□□□□ -1.3
SSBP3-212ENST00000528930 COMMD2Q86X83 199 aa6.96□□□□□ -1.3
SSBP3-212ENST00000528930 BCL6BQ8N143 479 aaPredicted RBP6.96□□□□□ -1.3
SSBP3-212ENST00000528930 OR5T2Q8NGG2 359 aa6.96□□□□□ -1.3
SSBP3-212ENST00000528930 APH1BQ8WW43 257 aa6.96□□□□□ -1.3
SSBP3-212ENST00000528930 AQP3Q92482 292 aa6.96□□□□□ -1.3
SSBP3-212ENST00000528930 SLC25A28Q96A46 364 aa6.96□□□□□ -1.3
SSBP3-212ENST00000528930 TECTBQ96PL2 329 aa6.96□□□□□ -1.3
SSBP3-212ENST00000528930 FANCD2OSQ96PS1 177 aa6.96□□□□□ -1.3
SSBP3-212ENST00000528930 ZNF649Q9BS31 505 aa6.96□□□□□ -1.3
SSBP3-212ENST00000528930 GPR173Q9NS66 373 aa6.96□□□□□ -1.3
SSBP3-212ENST00000528930 ACOXLQ9NUZ1 547 aa6.96□□□□□ -1.3
SSBP3-212ENST00000528930 ZNF69Q9UC07 566 aa6.96□□□□□ -1.3
SSBP3-212ENST00000528930 DAPK2Q9UIK4 370 aa6.96□□□□□ -1.3
SSBP3-212ENST00000528930 HSPE1-MOB4S4R3N1 261 aa6.96□□□□□ -1.3
SSBP3-212ENST00000528930 IGHV3OR16-10A0A075B7F0 116 aa6.95□□□□□ -1.3
SSBP3-212ENST00000528930 ENSAO43768 121 aaKnown RBP6.95□□□□□ -1.3
SSBP3-212ENST00000528930 GABARAPO95166 117 aa6.95□□□□□ -1.3
SSBP3-212ENST00000528930 PTTG1O95997 202 aa6.95□□□□□ -1.3
SSBP3-212ENST00000528930 PLATP00750 562 aa6.95□□□□□ -1.3
SSBP3-212ENST00000528930 OPN1MWP04001 364 aa6.95□□□□□ -1.3
SSBP3-212ENST00000528930 TFF1P04155 84 aa6.95□□□□□ -1.3
SSBP3-212ENST00000528930 LIPFP07098 398 aa6.95□□□□□ -1.3
SSBP3-212ENST00000528930 OPN1MW2P0DN77 364 aa6.95□□□□□ -1.3
SSBP3-212ENST00000528930 OPN1MW3P0DN78 364 aa6.95□□□□□ -1.3
SSBP3-212ENST00000528930 DBTP11182 482 aaKnown RBP6.95□□□□□ -1.3
SSBP3-212ENST00000528930 MMP9P14780 707 aa6.95□□□□□ -1.3
SSBP3-212ENST00000528930 ZNF182P17025 639 aaPredicted RBP6.95□□□□□ -1.3
SSBP3-212ENST00000528930 GLRA1P23415 457 aa6.95□□□□□ -1.3
SSBP3-212ENST00000528930 NANOS3P60323 173 aaKnown RBP6.95□□□□□ -1.3
SSBP3-212ENST00000528930 GMFBP60983 142 aa6.95□□□□□ -1.3
SSBP3-212ENST00000528930 FGF12P61328 243 aa6.95□□□□□ -1.3
SSBP3-212ENST00000528930 ZNF91Q05481 1191 aa6.95□□□□□ -1.3
SSBP3-212ENST00000528930 C2orf68Q2NKX9 166 aa6.95□□□□□ -1.3
SSBP3-212ENST00000528930 KLHL22Q53GT1 634 aa6.95□□□□□ -1.3
SSBP3-212ENST00000528930 CD276Q5ZPR3 534 aa6.95□□□□□ -1.3
SSBP3-212ENST00000528930 PLCXD3Q63HM9 321 aa6.95□□□□□ -1.3
SSBP3-212ENST00000528930 XAF1Q6GPH4 301 aa6.95□□□□□ -1.3
SSBP3-212ENST00000528930 HAGHLQ6PII5 290 aaPredicted RBP6.95□□□□□ -1.3
SSBP3-212ENST00000528930 RBMS3Q6XE24 437 aaKnown RBP6.95□□□□□ -1.3
SSBP3-212ENST00000528930 BTN2A1Q7KYR7 527 aa6.95□□□□□ -1.3
SSBP3-212ENST00000528930 SLC36A1Q7Z2H8 476 aa6.95□□□□□ -1.3
SSBP3-212ENST00000528930 KCTD20Q7Z5Y7 419 aa6.95□□□□□ -1.3
SSBP3-212ENST00000528930 RDH10Q8IZV5 341 aa6.95□□□□□ -1.3
SSBP3-212ENST00000528930 MFSD4AQ8N468 514 aa6.95□□□□□ -1.3
SSBP3-212ENST00000528930 ACBD7Q8N6N7 88 aa6.95□□□□□ -1.3
SSBP3-212ENST00000528930 FAM216BQ8N7L0 139 aa6.95□□□□□ -1.3
SSBP3-212ENST00000528930 LY6G5BQ8NDX9 201 aa6.95□□□□□ -1.3
SSBP3-212ENST00000528930 OR6Q1Q8NGQ2 317 aa6.95□□□□□ -1.3
SSBP3-212ENST00000528930 ZNF671Q8TAW3 534 aa6.95□□□□□ -1.3
SSBP3-212ENST00000528930 TRIM63Q969Q1 353 aa6.95□□□□□ -1.3
SSBP3-212ENST00000528930 MUL1Q969V5 352 aa6.95□□□□□ -1.3
SSBP3-212ENST00000528930 ZNF48Q96MX3 618 aaPredicted RBP6.95□□□□□ -1.3
SSBP3-212ENST00000528930 GAFA1Q96PS6 74 aa6.95□□□□□ -1.3
SSBP3-212ENST00000528930 TBX15Q96SF7 602 aa6.95□□□□□ -1.3
SSBP3-212ENST00000528930 DCUN1D5Q9BTE7 237 aa6.95□□□□□ -1.3
SSBP3-212ENST00000528930 DNTTIP1Q9H147 329 aa6.95□□□□□ -1.3
SSBP3-212ENST00000528930 BEX1Q9HBH7 125 aa6.95□□□□□ -1.3
SSBP3-212ENST00000528930 AMBNQ9NP70 447 aa6.95□□□□□ -1.3
SSBP3-212ENST00000528930 SNTG1Q9NSN8 517 aa6.95□□□□□ -1.3
SSBP3-212ENST00000528930 MRPS18AQ9NVS2 196 aaKnown RBP6.95□□□□□ -1.3
SSBP3-212ENST00000528930 NLKQ9UBE8 527 aa6.95□□□□□ -1.3
SSBP3-212ENST00000528930 RPUSD1Q9UJJ7 312 aaKnown RBP6.95□□□□□ -1.3
SSBP3-212ENST00000528930 GNG8Q9UK08 70 aa6.95□□□□□ -1.3
SSBP3-212ENST00000528930 ZNF222Q9UK12 451 aa6.95□□□□□ -1.3
SSBP3-212ENST00000528930 SOX21Q9Y651 276 aaPredicted RBP6.95□□□□□ -1.3
SSBP3-212ENST00000528930 FRAS1Q86XX4 4008 aa6.95□□□□□ -1.3
SSBP3-212ENST00000528930 DNAH7Q8WXX0 4024 aa6.95□□□□□ -1.3
SSBP3-212ENST00000528930 IGKV1D-17A0A075B6S4 117 aa6.94□□□□□ -1.3
SSBP3-212ENST00000528930 A0A1B0GVI7 797 aa6.94□□□□□ -1.3
SSBP3-212ENST00000528930 DAPL1A0PJW8 107 aa6.94□□□□□ -1.3
SSBP3-212ENST00000528930 PQLC2LA1A4F0 135 aa6.94□□□□□ -1.3
SSBP3-212ENST00000528930 ANKRD34BA5PLL1 514 aa6.94□□□□□ -1.3
SSBP3-212ENST00000528930 ANKRD61A6NGH8 418 aa6.94□□□□□ -1.3
SSBP3-212ENST00000528930 SNTNA6NMZ2 147 aa6.94□□□□□ -1.3
SSBP3-212ENST00000528930 ZNF879B4DU55 563 aa6.94□□□□□ -1.3
SSBP3-212ENST00000528930 H3BSH0 61 aa6.94□□□□□ -1.3
SSBP3-212ENST00000528930 SYT7O43581 403 aa6.94□□□□□ -1.3
SSBP3-212ENST00000528930 SYNGR1O43759 233 aa6.94□□□□□ -1.3
SSBP3-212ENST00000528930 MPZL2O60487 215 aa6.94□□□□□ -1.3
SSBP3-212ENST00000528930 NOS1APO75052 506 aaPredicted RBP6.94□□□□□ -1.3
SSBP3-212ENST00000528930 WBP4O75554 376 aaKnown RBP6.94□□□□□ -1.3
SSBP3-212ENST00000528930 ECDO95905 644 aaPredicted RBP6.94□□□□□ -1.3
SSBP3-212ENST00000528930 ISG15P05161 165 aa6.94□□□□□ -1.3
SSBP3-212ENST00000528930 SFTPBP07988 381 aa6.94□□□□□ -1.3
SSBP3-212ENST00000528930 ACAA1P09110 424 aaPredicted RBP6.94□□□□□ -1.3
SSBP3-212ENST00000528930 PGA5P0DJD9 388 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms