RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 C9orf16Q9BUW7 83 aa8.46□□□□□ -1.06
PRPF40B-204ENST00000527253 ALG8Q9BVK2 526 aa8.46□□□□□ -1.06
PRPF40B-204ENST00000527253 HEXA-AS1Q9H8Q6 139 aa8.46□□□□□ -1.06
PRPF40B-204ENST00000527253 SEBOXQ9HB31 216 aaPredicted RBP8.46□□□□□ -1.06
PRPF40B-204ENST00000527253 FAM118AQ9NWS6 357 aa8.46□□□□□ -1.06
PRPF40B-204ENST00000527253 TRBV2A0A0J9YWF9 115 aa8.45□□□□□ -1.06
PRPF40B-204ENST00000527253 LOC100130705A0A1B0GUX0 176 aa8.45□□□□□ -1.06
PRPF40B-204ENST00000527253 BTBD17A6NE02 478 aa8.45□□□□□ -1.06
PRPF40B-204ENST00000527253 ODF3BA8MYP8 253 aa8.45□□□□□ -1.06
PRPF40B-204ENST00000527253 CHST1O43916 411 aa8.45□□□□□ -1.06
PRPF40B-204ENST00000527253 WBP4O75554 376 aaKnown RBP8.45□□□□□ -1.06
PRPF40B-204ENST00000527253 MMP23AO75900 390 aa8.45□□□□□ -1.06
PRPF40B-204ENST00000527253 MT-ND2P03891 347 aa8.45□□□□□ -1.06
PRPF40B-204ENST00000527253 ZNF728P0DKX0 622 aa8.45□□□□□ -1.06
PRPF40B-204ENST00000527253 ZNF20P17024 532 aa8.45□□□□□ -1.06
PRPF40B-204ENST00000527253 JUNBP17275 347 aaPredicted RBP8.45□□□□□ -1.06
PRPF40B-204ENST00000527253 PRKACBP22694 351 aa8.45□□□□□ -1.06
PRPF40B-204ENST00000527253 TGFBR2P37173 567 aa8.45□□□□□ -1.06
PRPF40B-204ENST00000527253 OR3A1P47881 315 aa8.45□□□□□ -1.06
PRPF40B-204ENST00000527253 RAB13P51153 203 aa8.45□□□□□ -1.06
PRPF40B-204ENST00000527253 SNU13P55769 128 aaKnown RBP8.45□□□□□ -1.06
PRPF40B-204ENST00000527253 EDDM3BP56851 147 aa8.45□□□□□ -1.06
PRPF40B-204ENST00000527253 ZNF146Q15072 292 aa8.45□□□□□ -1.06
PRPF40B-204ENST00000527253 AANATQ16613 207 aa8.45□□□□□ -1.06
PRPF40B-204ENST00000527253 LRRC75BQ2VPJ9 315 aa8.45□□□□□ -1.06
PRPF40B-204ENST00000527253 CCBE1Q6UXH8 406 aaPredicted RBP8.45□□□□□ -1.06
PRPF40B-204ENST00000527253 OR8H2Q8N162 312 aa8.45□□□□□ -1.06
PRPF40B-204ENST00000527253 SYS1Q8N2H4 156 aa8.45□□□□□ -1.06
PRPF40B-204ENST00000527253 PQLC1Q8N2U9 271 aa8.45□□□□□ -1.06
PRPF40B-204ENST00000527253 OR52I1Q8NGK6 324 aa8.45□□□□□ -1.06
PRPF40B-204ENST00000527253 OR13C9Q8NGT0 318 aa8.45□□□□□ -1.06
PRPF40B-204ENST00000527253 CHST6Q9GZX3 395 aa8.45□□□□□ -1.06
PRPF40B-204ENST00000527253 HMG20AQ9NP66 347 aa8.45□□□□□ -1.06
PRPF40B-204ENST00000527253 MRPS18AQ9NVS2 196 aaKnown RBP8.45□□□□□ -1.06
PRPF40B-204ENST00000527253 ERVK13-1Q9NX77 482 aa8.45□□□□□ -1.06
PRPF40B-204ENST00000527253 HHLA2Q9UM44 414 aa8.45□□□□□ -1.06
PRPF40B-204ENST00000527253 KIAA2026Q5HYC2 2103 aa8.45□□□□□ -1.06
PRPF40B-204ENST00000527253 A0A1W2PPH5 198 aa8.44□□□□□ -1.06
PRPF40B-204ENST00000527253 KDM4BO94953 1096 aa8.44□□□□□ -1.06
PRPF40B-204ENST00000527253 ZFPL1O95159 310 aa8.44□□□□□ -1.06
PRPF40B-204ENST00000527253 LIMS3P0CW19 117 aa8.44□□□□□ -1.06
PRPF40B-204ENST00000527253 LIMS4P0CW20 117 aa8.44□□□□□ -1.06
PRPF40B-204ENST00000527253 IGHV1-8P0DP01 117 aa8.44□□□□□ -1.06
PRPF40B-204ENST00000527253 PRKACAP17612 351 aa8.44□□□□□ -1.06
PRPF40B-204ENST00000527253 GTF2A1P52655 376 aaPredicted RBP8.44□□□□□ -1.06
PRPF40B-204ENST00000527253 MEF2CQ06413 473 aaPredicted RBP8.44□□□□□ -1.06
PRPF40B-204ENST00000527253 EDDM3AQ14507 147 aa8.44□□□□□ -1.06
PRPF40B-204ENST00000527253 GRK1Q15835 563 aa8.44□□□□□ -1.06
PRPF40B-204ENST00000527253 SMN1Q16637 294 aaKnown RBP8.44□□□□□ -1.06
PRPF40B-204ENST00000527253 PLA1AQ53H76 456 aa8.44□□□□□ -1.06
PRPF40B-204ENST00000527253 BAIAP2L2Q6UXY1 529 aa8.44□□□□□ -1.06
PRPF40B-204ENST00000527253 LHFPL2Q6ZUX7 228 aa8.44□□□□□ -1.06
PRPF40B-204ENST00000527253 GDPD3Q7L5L3 318 aa8.44□□□□□ -1.06
PRPF40B-204ENST00000527253 ZNF676Q8N7Q3 588 aa8.44□□□□□ -1.06
PRPF40B-204ENST00000527253 OR11H6Q8NGC7 330 aa8.44□□□□□ -1.06
PRPF40B-204ENST00000527253 OR5D18Q8NGL1 313 aa8.44□□□□□ -1.06
PRPF40B-204ENST00000527253 OR13C3Q8NGS6 347 aa8.44□□□□□ -1.06
PRPF40B-204ENST00000527253 RGP1Q92546 391 aaPredicted RBP8.44□□□□□ -1.06
PRPF40B-204ENST00000527253 SPSB1Q96BD6 273 aa8.44□□□□□ -1.06
PRPF40B-204ENST00000527253 OPALINQ96PE5 141 aa8.44□□□□□ -1.06
PRPF40B-204ENST00000527253 PDCD1LG2Q9BQ51 273 aa8.44□□□□□ -1.06
PRPF40B-204ENST00000527253 FBLN5Q9UBX5 448 aa8.44□□□□□ -1.06
PRPF40B-204ENST00000527253 hCG_1809904A0A1W2PP81 198 aa8.43□□□□□ -1.06
PRPF40B-204ENST00000527253 A0A1W2PPE2 198 aa8.43□□□□□ -1.06
PRPF40B-204ENST00000527253 A0A1W2PR64 198 aa8.43□□□□□ -1.06
PRPF40B-204ENST00000527253 A0A1W2PRV1 198 aa8.43□□□□□ -1.06
PRPF40B-204ENST00000527253 SNTNA6NMZ2 147 aa8.43□□□□□ -1.06
PRPF40B-204ENST00000527253 VGLL3A8MV65 326 aa8.43□□□□□ -1.06
PRPF40B-204ENST00000527253 SIRPB1O00241 398 aa8.43□□□□□ -1.06
PRPF40B-204ENST00000527253 EBAG9O00559 213 aa8.43□□□□□ -1.06
PRPF40B-204ENST00000527253 MPZL2O60487 215 aa8.43□□□□□ -1.06
PRPF40B-204ENST00000527253 BAG2O95816 211 aa8.43□□□□□ -1.06
PRPF40B-204ENST00000527253 CLIC3O95833 236 aa8.43□□□□□ -1.06
PRPF40B-204ENST00000527253 FADS2O95864 444 aaKnown RBP8.43□□□□□ -1.06
PRPF40B-204ENST00000527253 RBP4P02753 201 aa8.43□□□□□ -1.06
PRPF40B-204ENST00000527253 ARG1P05089 322 aa8.43□□□□□ -1.06
PRPF40B-204ENST00000527253 GABRR1P24046 479 aa8.43□□□□□ -1.06
PRPF40B-204ENST00000527253 PEX2P28328 305 aa8.43□□□□□ -1.06
PRPF40B-204ENST00000527253 GDNFP39905 211 aa8.43□□□□□ -1.06
PRPF40B-204ENST00000527253 KIR2DS4P43632 304 aa8.43□□□□□ -1.06
PRPF40B-204ENST00000527253 EFNB2P52799 333 aa8.43□□□□□ -1.06
PRPF40B-204ENST00000527253 ZP1P60852 638 aa8.43□□□□□ -1.06
PRPF40B-204ENST00000527253 ACTA2P62736 377 aa8.43□□□□□ -1.06
PRPF40B-204ENST00000527253 ACTG2P63267 376 aa8.43□□□□□ -1.06
PRPF40B-204ENST00000527253 RAB40BQ12829 278 aa8.43□□□□□ -1.06
PRPF40B-204ENST00000527253 IL18R1Q13478 541 aa8.43□□□□□ -1.06
PRPF40B-204ENST00000527253 ZNF626Q68DY1 528 aa8.43□□□□□ -1.06
PRPF40B-204ENST00000527253 XAF1Q6GPH4 301 aa8.43□□□□□ -1.06
PRPF40B-204ENST00000527253 Q6P435 159 aa8.43□□□□□ -1.06
PRPF40B-204ENST00000527253 Q8IYB0 196 aa8.43□□□□□ -1.06
PRPF40B-204ENST00000527253 C10orf67Q8IYJ2 551 aa8.43□□□□□ -1.06
PRPF40B-204ENST00000527253 Q96MT0 163 aa8.43□□□□□ -1.06
PRPF40B-204ENST00000527253 ZNF714Q96N38 554 aa8.43□□□□□ -1.06
PRPF40B-204ENST00000527253 ZCCHC4Q9H5U6 513 aa8.43□□□□□ -1.06
PRPF40B-204ENST00000527253 TCF7L1Q9HCS4 588 aa8.43□□□□□ -1.06
PRPF40B-204ENST00000527253 FGF20Q9NP95 211 aaPredicted RBP8.43□□□□□ -1.06
PRPF40B-204ENST00000527253 INPP5EQ9NRR6 644 aa8.43□□□□□ -1.06
PRPF40B-204ENST00000527253 GSTK1Q9Y2Q3 226 aa8.43□□□□□ -1.06
PRPF40B-204ENST00000527253 SIRT4Q9Y6E7 314 aaPredicted RBP8.43□□□□□ -1.06
PRPF40B-204ENST00000527253 CMYA5Q8N3K9 4069 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms