RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 PHF1O43189 567 aaPredicted RBP8.93□□□□□ -0.98
NEDD8-205ENST00000527046 ADAM20O43506 726 aa8.93□□□□□ -0.98
NEDD8-205ENST00000527046 NDUFA2O43678 99 aa8.93□□□□□ -0.98
NEDD8-205ENST00000527046 AIREO43918 545 aa8.93□□□□□ -0.98
NEDD8-205ENST00000527046 PSPNO60542 156 aa8.93□□□□□ -0.98
NEDD8-205ENST00000527046 NXPH2O95156 264 aa8.93□□□□□ -0.98
NEDD8-205ENST00000527046 GABARAPO95166 117 aa8.93□□□□□ -0.98
NEDD8-205ENST00000527046 SLC2A2P11168 524 aaPredicted RBP8.93□□□□□ -0.98
NEDD8-205ENST00000527046 CLDN12P56749 244 aa8.93□□□□□ -0.98
NEDD8-205ENST00000527046 NCS1P62166 190 aa8.93□□□□□ -0.98
NEDD8-205ENST00000527046 LSM3P62310 102 aaKnown RBP8.93□□□□□ -0.98
NEDD8-205ENST00000527046 C2orf76Q3KRA6 126 aa8.93□□□□□ -0.98
NEDD8-205ENST00000527046 NHLRC3Q5JS37 347 aa8.93□□□□□ -0.98
NEDD8-205ENST00000527046 GPR107Q5VW38 600 aa8.93□□□□□ -0.98
NEDD8-205ENST00000527046 GLT8D1Q68CQ7 371 aa8.93□□□□□ -0.98
NEDD8-205ENST00000527046 LURAP1LQ8IV03 231 aa8.93□□□□□ -0.98
NEDD8-205ENST00000527046 SPICQ8N5J4 248 aa8.93□□□□□ -0.98
NEDD8-205ENST00000527046 FOXRED1Q96CU9 486 aaPredicted RBP8.93□□□□□ -0.98
NEDD8-205ENST00000527046 NEIL1Q96FI4 390 aaPredicted RBP8.93□□□□□ -0.98
NEDD8-205ENST00000527046 GPER1Q99527 375 aa8.93□□□□□ -0.98
NEDD8-205ENST00000527046 DNTTIP1Q9H147 329 aa8.93□□□□□ -0.98
NEDD8-205ENST00000527046 VCX3AQ9NNX9 186 aa8.93□□□□□ -0.98
NEDD8-205ENST00000527046 CSPG4Q6UVK1 2322 aa8.93□□□□□ -0.98
NEDD8-205ENST00000527046 ZANQ9Y493 2812 aa8.93□□□□□ -0.98
NEDD8-205ENST00000527046 DSCAML1Q8TD84 2053 aa8.92□□□□□ -0.98
NEDD8-205ENST00000527046 A0A0A6YYD4 124 aa8.92□□□□□ -0.98
NEDD8-205ENST00000527046 TRAV24A0A0B4J272 114 aa8.92□□□□□ -0.98
NEDD8-205ENST00000527046 IFITM5A6NNB3 132 aa8.92□□□□□ -0.98
NEDD8-205ENST00000527046 FOXI3A8MTJ6 420 aaPredicted RBP8.92□□□□□ -0.98
NEDD8-205ENST00000527046 C22orf46C9J442 243 aa8.92□□□□□ -0.98
NEDD8-205ENST00000527046 TMPRSS2O15393 492 aa8.92□□□□□ -0.98
NEDD8-205ENST00000527046 HTR3BO95264 441 aa8.92□□□□□ -0.98
NEDD8-205ENST00000527046 OR2H2O95918 312 aa8.92□□□□□ -0.98
NEDD8-205ENST00000527046 AVPP01185 164 aa8.92□□□□□ -0.98
NEDD8-205ENST00000527046 OCMP0CE72 109 aaPredicted RBP8.92□□□□□ -0.98
NEDD8-205ENST00000527046 PRKACAP17612 351 aa8.92□□□□□ -0.98
NEDD8-205ENST00000527046 RAB3BP20337 219 aa8.92□□□□□ -0.98
NEDD8-205ENST00000527046 CPT2P23786 658 aa8.92□□□□□ -0.98
NEDD8-205ENST00000527046 HTR2CP28335 458 aa8.92□□□□□ -0.98
NEDD8-205ENST00000527046 VBP1P61758 197 aa8.92□□□□□ -0.98
NEDD8-205ENST00000527046 COL10A1Q03692 680 aa8.92□□□□□ -0.98
NEDD8-205ENST00000527046 P2RY14Q15391 338 aa8.92□□□□□ -0.98
NEDD8-205ENST00000527046 SMIM21Q3B7S5 101 aa8.92□□□□□ -0.98
NEDD8-205ENST00000527046 PIGYQ3MUY2 71 aa8.92□□□□□ -0.98
NEDD8-205ENST00000527046 HES5Q5TA89 166 aa8.92□□□□□ -0.98
NEDD8-205ENST00000527046 C1orf229Q6ZS94 237 aaPredicted RBP8.92□□□□□ -0.98
NEDD8-205ENST00000527046 RTN4RL2Q86UN3 420 aa8.92□□□□□ -0.98
NEDD8-205ENST00000527046 TPRA1Q86W33 373 aa8.92□□□□□ -0.98
NEDD8-205ENST00000527046 Q8IYB0 196 aa8.92□□□□□ -0.98
NEDD8-205ENST00000527046 LY6G5BQ8NDX9 201 aa8.92□□□□□ -0.98
NEDD8-205ENST00000527046 OR4S1Q8NGB4 309 aa8.92□□□□□ -0.98
NEDD8-205ENST00000527046 OR51D1Q8NGF3 324 aa8.92□□□□□ -0.98
NEDD8-205ENST00000527046 OR6M1Q8NGM8 313 aa8.92□□□□□ -0.98
NEDD8-205ENST00000527046 EMG1Q92979 244 aaKnown RBP8.92□□□□□ -0.98
NEDD8-205ENST00000527046 KCTD7Q96MP8 289 aa8.92□□□□□ -0.98
NEDD8-205ENST00000527046 BARHL1Q9BZE3 327 aa8.92□□□□□ -0.98
NEDD8-205ENST00000527046 RBM38Q9H0Z9 239 aaKnown RBP8.92□□□□□ -0.98
NEDD8-205ENST00000527046 METTL9Q9H1A3 318 aa8.92□□□□□ -0.98
NEDD8-205ENST00000527046 BANF2Q9H503 90 aa8.92□□□□□ -0.98
NEDD8-205ENST00000527046 NEK6Q9HC98 313 aa8.92□□□□□ -0.98
NEDD8-205ENST00000527046 DNAJB11Q9UBS4 358 aa8.92□□□□□ -0.98
NEDD8-205ENST00000527046 GSTK1Q9Y2Q3 226 aa8.92□□□□□ -0.98
NEDD8-205ENST00000527046 CEPT1Q9Y6K0 416 aa8.92□□□□□ -0.98
NEDD8-205ENST00000527046 F8P00451 2351 aa8.92□□□□□ -0.98
NEDD8-205ENST00000527046 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.92□□□□□ -0.982e-8■■■■□ 26.3
NEDD8-205ENST00000527046 K7N7A8 449 aa8.91□□□□□ -0.98
NEDD8-205ENST00000527046 GEMIN2O14893 280 aaKnown RBP8.91□□□□□ -0.98
NEDD8-205ENST00000527046 HAND1O96004 215 aa8.91□□□□□ -0.98
NEDD8-205ENST00000527046 RPS2P15880 293 aaKnown RBP8.91□□□□□ -0.98
NEDD8-205ENST00000527046 SERPINA2P20848 420 aa8.91□□□□□ -0.98
NEDD8-205ENST00000527046 GABRA2P47869 451 aa8.91□□□□□ -0.98
NEDD8-205ENST00000527046 PITPNBP48739 271 aa8.91□□□□□ -0.98
NEDD8-205ENST00000527046 EFNB2P52799 333 aa8.91□□□□□ -0.98
NEDD8-205ENST00000527046 SNU13P55769 128 aaKnown RBP8.91□□□□□ -0.98
NEDD8-205ENST00000527046 RBM11P57052 281 aaKnown RBP8.91□□□□□ -0.98
NEDD8-205ENST00000527046 MXD1Q05195 221 aa8.91□□□□□ -0.98
NEDD8-205ENST00000527046 RSU1Q15404 277 aa8.91□□□□□ -0.98
NEDD8-205ENST00000527046 SLC22A6Q4U2R8 563 aa8.91□□□□□ -0.98
NEDD8-205ENST00000527046 SPIN3Q5JUX0 258 aa8.91□□□□□ -0.98
NEDD8-205ENST00000527046 AWAT2Q6E213 333 aa8.91□□□□□ -0.98
NEDD8-205ENST00000527046 OSR2Q8N2R0 312 aa8.91□□□□□ -0.98
NEDD8-205ENST00000527046 FAM89BQ8N5H3 189 aa8.91□□□□□ -0.98
NEDD8-205ENST00000527046 C11orf42Q8N5U0 333 aa8.91□□□□□ -0.98
NEDD8-205ENST00000527046 LINC01356Q8N9X3 169 aa8.91□□□□□ -0.98
NEDD8-205ENST00000527046 Q96M66 194 aa8.91□□□□□ -0.98
NEDD8-205ENST00000527046 FAM192AQ9GZU8 254 aa8.91□□□□□ -0.98
NEDD8-205ENST00000527046 SLITRK2Q9H156 845 aa8.91□□□□□ -0.98
NEDD8-205ENST00000527046 LPAR5Q9H1C0 372 aa8.91□□□□□ -0.98
NEDD8-205ENST00000527046 ELL3Q9HB65 397 aaPredicted RBP8.91□□□□□ -0.98
NEDD8-205ENST00000527046 GHRLQ9UBU3 117 aa8.91□□□□□ -0.98
NEDD8-205ENST00000527046 FBLN5Q9UBX5 448 aa8.91□□□□□ -0.98
NEDD8-205ENST00000527046 OR14J1Q9UGF5 321 aa8.91□□□□□ -0.98
NEDD8-205ENST00000527046 PCDHB10Q9UN67 800 aa8.91□□□□□ -0.98
NEDD8-205ENST00000527046 TMEM272A0A1B0GTI8 110 aa8.9□□□□□ -0.98
NEDD8-205ENST00000527046 NOTOA8MTQ0 251 aa8.9□□□□□ -0.98
NEDD8-205ENST00000527046 B4DSR2 109 aa8.9□□□□□ -0.98
NEDD8-205ENST00000527046 AIPO00170 330 aa8.9□□□□□ -0.98
NEDD8-205ENST00000527046 SLC33A1O00400 549 aaPredicted RBP8.9□□□□□ -0.98
NEDD8-205ENST00000527046 PDCD5O14737 125 aa8.9□□□□□ -0.98
NEDD8-205ENST00000527046 CD5LO43866 347 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms