RNA–Protein interactions for RNA: ENST00000526553.5

CD44-223, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-223ENST00000526553 PRORYQ9H606 182 aa2.6□□□□□ -1.99
CD44-223ENST00000526553 VAX2Q9UIW0 290 aa2.6□□□□□ -1.99
CD44-223ENST00000526553 SIGLEC7Q9Y286 467 aa2.6□□□□□ -1.99
CD44-223ENST00000526553 TSSC4Q9Y5U2 329 aaPredicted RBP2.6□□□□□ -1.99
CD44-223ENST00000526553 SCN4AP35499 1836 aa2.6□□□□□ -1.99
CD44-223ENST00000526553 KIF20BQ96Q89 1820 aa2.6□□□□□ -1.99
CD44-223ENST00000526553 FER1L6Q2WGJ9 1857 aa2.6□□□□□ -1.99
CD44-223ENST00000526553 TNRC18O15417 2968 aaPredicted RBP2.6□□□□□ -1.99
CD44-223ENST00000526553 ROCK2O75116 1388 aaKnown RBP2.6□□□□□ -1.99
CD44-223ENST00000526553 EDC4Q6P2E9 1401 aaKnown RBP2.59□□□□□ -1.99
CD44-223ENST00000526553 COL5A3P25940 1745 aaPredicted RBP2.59□□□□□ -1.99
CD44-223ENST00000526553 SLX4Q8IY92 1834 aa2.59□□□□□ -1.99
CD44-223ENST00000526553 IGHV7-4-1A0A0J9YVY3 117 aa2.59□□□□□ -1.99
CD44-223ENST00000526553 GOLGA8QA0A0J9YX86 632 aa2.59□□□□□ -1.99
CD44-223ENST00000526553 FAM240AA0A1B0GVK7 77 aa2.59□□□□□ -1.99
CD44-223ENST00000526553 TVP23AA6NH52 213 aa2.59□□□□□ -1.99
CD44-223ENST00000526553 NDUFC2-KCTD14E9PQ53 114 aa2.59□□□□□ -1.99
CD44-223ENST00000526553 M0R1B8 84 aa2.59□□□□□ -1.99
CD44-223ENST00000526553 BET1O15155 118 aa2.59□□□□□ -1.99
CD44-223ENST00000526553 TCAPO15273 167 aa2.59□□□□□ -1.99
CD44-223ENST00000526553 GATBO75879 557 aaKnown RBP2.59□□□□□ -1.99
CD44-223ENST00000526553 C1GALT1C1LP0DN25 315 aa2.59□□□□□ -1.99
CD44-223ENST00000526553 CD9P21926 228 aa2.59□□□□□ -1.99
CD44-223ENST00000526553 P2RY2P41231 377 aa2.59□□□□□ -1.99
CD44-223ENST00000526553 PRLHRP49683 370 aa2.59□□□□□ -1.99
CD44-223ENST00000526553 TRDNQ13061 729 aa2.59□□□□□ -1.99
CD44-223ENST00000526553 STX3Q13277 289 aa2.59□□□□□ -1.99
CD44-223ENST00000526553 ANGPT1Q15389 498 aa2.59□□□□□ -1.99
CD44-223ENST00000526553 YIF1BQ5BJH7 314 aa2.59□□□□□ -1.99
CD44-223ENST00000526553 TMEM236Q5W0B7 351 aa2.59□□□□□ -1.99
CD44-223ENST00000526553 Q6ZSR6 202 aa2.59□□□□□ -1.99
CD44-223ENST00000526553 WDR86Q86TI4 376 aa2.59□□□□□ -1.99
CD44-223ENST00000526553 ERO1BQ86YB8 467 aa2.59□□□□□ -1.99
CD44-223ENST00000526553 UBALD2Q8IYN6 164 aa2.59□□□□□ -1.99
CD44-223ENST00000526553 LGI3Q8N145 548 aa2.59□□□□□ -1.99
CD44-223ENST00000526553 C17orf78Q8N4C9 275 aa2.59□□□□□ -1.99
CD44-223ENST00000526553 OR4M1Q8NGD0 313 aa2.59□□□□□ -1.99
CD44-223ENST00000526553 OR2L8Q8NGY9 312 aa2.59□□□□□ -1.99
CD44-223ENST00000526553 OR52P1PQ8NH57 321 aa2.59□□□□□ -1.99
CD44-223ENST00000526553 OR1L1Q8NH94 360 aa2.59□□□□□ -1.99
CD44-223ENST00000526553 NT5CQ8TCD5 201 aa2.59□□□□□ -1.99
CD44-223ENST00000526553 KCNS1Q96KK3 526 aa2.59□□□□□ -1.99
CD44-223ENST00000526553 OR4K3Q96R72 315 aa2.59□□□□□ -1.99
CD44-223ENST00000526553 RBBP8Q99708 897 aa2.59□□□□□ -1.99
CD44-223ENST00000526553 PDCD1LG2Q9BQ51 273 aa2.59□□□□□ -1.99
CD44-223ENST00000526553 FGF23Q9GZV9 251 aaPredicted RBP2.59□□□□□ -1.99
CD44-223ENST00000526553 ENOPH1Q9UHY7 261 aa2.59□□□□□ -1.99
CD44-223ENST00000526553 USP42Q9H9J4 1324 aaKnown RBP2.59□□□□□ -2
CD44-223ENST00000526553 CD163L1Q9NR16 1453 aa2.58□□□□□ -2
CD44-223ENST00000526553 ANKRD31Q8N7Z5 1873 aa2.58□□□□□ -2
CD44-223ENST00000526553 IGKV1-27A0A075B6S5 117 aa2.58□□□□□ -2
CD44-223ENST00000526553 IGHV3-72A0A0B4J1Y9 119 aa2.58□□□□□ -2
CD44-223ENST00000526553 TRAV8-6A0A0B4J262 113 aa2.58□□□□□ -2
CD44-223ENST00000526553 A0A1B0GW15 77 aa2.58□□□□□ -2
CD44-223ENST00000526553 TMEM150BA6NC51 233 aa2.58□□□□□ -2
CD44-223ENST00000526553 OR5H1A6NKK0 313 aa2.58□□□□□ -2
CD44-223ENST00000526553 H0YJW9 148 aa2.58□□□□□ -2
CD44-223ENST00000526553 J3QT63 122 aa2.58□□□□□ -2
CD44-223ENST00000526553 K7EN84 100 aa2.58□□□□□ -2
CD44-223ENST00000526553 HSPD1P10809 573 aaKnown RBP2.58□□□□□ -2
CD44-223ENST00000526553 LIPCP11150 499 aa2.58□□□□□ -2
CD44-223ENST00000526553 IL1RNP18510 177 aa2.58□□□□□ -2
CD44-223ENST00000526553 PSMB5P28074 263 aa2.58□□□□□ -2
CD44-223ENST00000526553 IL12BP29460 328 aa2.58□□□□□ -2
CD44-223ENST00000526553 PRSS3P35030 304 aa2.58□□□□□ -2
CD44-223ENST00000526553 GALR1P47211 349 aa2.58□□□□□ -2
CD44-223ENST00000526553 CXCL12P48061 93 aa2.58□□□□□ -2
CD44-223ENST00000526553 PSMB2P49721 201 aa2.58□□□□□ -2
CD44-223ENST00000526553 OR12D2P58182 307 aa2.58□□□□□ -2
CD44-223ENST00000526553 TAS2R31P59538 309 aa2.58□□□□□ -2
CD44-223ENST00000526553 C2orf80Q0P641 193 aa2.58□□□□□ -2
CD44-223ENST00000526553 MOBPQ13875 183 aa2.58□□□□□ -2
CD44-223ENST00000526553 C6orf99Q4VX62 202 aa2.58□□□□□ -2
CD44-223ENST00000526553 ACTL10Q5JWF8 245 aa2.58□□□□□ -2
CD44-223ENST00000526553 IDNKQ5T6J7 187 aa2.58□□□□□ -2
CD44-223ENST00000526553 RESP18Q5W5W9 173 aa2.58□□□□□ -2
CD44-223ENST00000526553 CLEC6AQ6EIG7 209 aa2.58□□□□□ -2
CD44-223ENST00000526553 EPGNQ6UW88 154 aa2.58□□□□□ -2
CD44-223ENST00000526553 Q6ZR03 302 aa2.58□□□□□ -2
CD44-223ENST00000526553 SETD3Q86TU7 594 aaPredicted RBP2.58□□□□□ -2
CD44-223ENST00000526553 NELFCDQ8IXH7 590 aa2.58□□□□□ -2
CD44-223ENST00000526553 TMEM256Q8N2U0 113 aa2.58□□□□□ -2
CD44-223ENST00000526553 DRAM1Q8N682 238 aa2.58□□□□□ -2
CD44-223ENST00000526553 CYB561A3Q8NBI2 242 aa2.58□□□□□ -2
CD44-223ENST00000526553 OR10G2Q8NGC3 310 aa2.58□□□□□ -2
CD44-223ENST00000526553 OR51Q1Q8NH59 317 aa2.58□□□□□ -2
CD44-223ENST00000526553 UBALD1Q8TB05 177 aa2.58□□□□□ -2
CD44-223ENST00000526553 DEDD2Q8WXF8 326 aa2.58□□□□□ -2
CD44-223ENST00000526553 CPB2Q96IY4 423 aa2.58□□□□□ -2
CD44-223ENST00000526553 ZNF396Q96N95 335 aaPredicted RBP2.58□□□□□ -2
CD44-223ENST00000526553 RNF157Q96PX1 679 aa2.58□□□□□ -2
CD44-223ENST00000526553 ALS2CR12Q96Q35 445 aa2.58□□□□□ -2
CD44-223ENST00000526553 VAT1Q99536 393 aa2.58□□□□□ -2
CD44-223ENST00000526553 TBL1YQ9BQ87 522 aa2.58□□□□□ -2
CD44-223ENST00000526553 ACBD6Q9BR61 282 aa2.58□□□□□ -2
CD44-223ENST00000526553 METTL8Q9H825 291 aaKnown RBP2.58□□□□□ -2
CD44-223ENST00000526553 SLC38A10Q9HBR0 1119 aa2.58□□□□□ -2
CD44-223ENST00000526553 C8orf17Q9NRJ1 99 aa2.58□□□□□ -2
CD44-223ENST00000526553 RBFOX1Q9NWB1 397 aaKnown RBP2.58□□□□□ -2
CD44-223ENST00000526553 CD300AQ9UGN4 299 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms