RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 C15orf39Q6ZRI6 1047 aa12.22□□□□□ -0.45
LRRK1-202ENST00000525284 ZDHHC22Q8N966 263 aa12.22□□□□□ -0.45
LRRK1-202ENST00000525284 SSMEM1Q8WWF3 244 aa12.22□□□□□ -0.45
LRRK1-202ENST00000525284 SNRNP40Q96DI7 357 aaKnown RBP12.22□□□□□ -0.45
LRRK1-202ENST00000525284 RHOVQ96L33 236 aa12.22□□□□□ -0.45
LRRK1-202ENST00000525284 AKIP1Q9NQ31 210 aa12.22□□□□□ -0.45
LRRK1-202ENST00000525284 KLF13Q9Y2Y9 288 aaPredicted RBP12.22□□□□□ -0.45
LRRK1-202ENST00000525284 MPC2O95563 127 aa12.22□□□□□ -0.45
LRRK1-202ENST00000525284 TEX101Q9BY14 249 aa12.22□□□□□ -0.45
LRRK1-202ENST00000525284 LYRM4Q9HD34 91 aa12.22□□□□□ -0.45
LRRK1-202ENST00000525284 IGKV3D-15A0A087WSY6 115 aa12.22□□□□□ -0.45
LRRK1-202ENST00000525284 SHISA7A6NL88 538 aa12.22□□□□□ -0.45
LRRK1-202ENST00000525284 DSCR3O14972 297 aa12.22□□□□□ -0.45
LRRK1-202ENST00000525284 IGKV3-15P01624 115 aa12.22□□□□□ -0.45
LRRK1-202ENST00000525284 NPPBP16860 134 aa12.22□□□□□ -0.45
LRRK1-202ENST00000525284 EMDP50402 254 aa12.22□□□□□ -0.45
LRRK1-202ENST00000525284 FOXC1Q12948 553 aa12.22□□□□□ -0.45
LRRK1-202ENST00000525284 DHRS2Q13268 280 aa12.22□□□□□ -0.45
LRRK1-202ENST00000525284 VWA2Q5GFL6 755 aa12.22□□□□□ -0.45
LRRK1-202ENST00000525284 FUNDC1Q8IVP5 155 aa12.22□□□□□ -0.45
LRRK1-202ENST00000525284 RPS4Y2Q8TD47 263 aa12.22□□□□□ -0.45
LRRK1-202ENST00000525284 YIPF6Q96EC8 236 aa12.22□□□□□ -0.45
LRRK1-202ENST00000525284 DPH3P1Q9H4G8 78 aa12.22□□□□□ -0.45
LRRK1-202ENST00000525284 RAXQ9Y2V3 346 aa12.22□□□□□ -0.45
LRRK1-202ENST00000525284 CICQ96RK0 1608 aaPredicted RBP12.22□□□□□ -0.45
LRRK1-202ENST00000525284 INHBBP09529 407 aa12.22□□□□□ -0.45
LRRK1-202ENST00000525284 HTRA3P83110 453 aa12.22□□□□□ -0.45
LRRK1-202ENST00000525284 COX19Q49B96 90 aa12.22□□□□□ -0.45
LRRK1-202ENST00000525284 NDUFB6O95139 128 aa12.22□□□□□ -0.45
LRRK1-202ENST00000525284 GFRA1P56159 465 aa12.22□□□□□ -0.45
LRRK1-202ENST00000525284 TMEM33P57088 247 aa12.22□□□□□ -0.45
LRRK1-202ENST00000525284 BEND2Q8NDZ0 799 aa12.22□□□□□ -0.45
LRRK1-202ENST00000525284 OR13C6PQ8NH95 151 aa12.22□□□□□ -0.45
LRRK1-202ENST00000525284 PGPEP1Q9NXJ5 209 aa12.22□□□□□ -0.45
LRRK1-202ENST00000525284 TNFRSF1AP19438 455 aa12.21□□□□□ -0.45
LRRK1-202ENST00000525284 ARF6P62330 175 aa12.21□□□□□ -0.45
LRRK1-202ENST00000525284 CYB5R2Q6BCY4 276 aa12.21□□□□□ -0.45
LRRK1-202ENST00000525284 ALKBH3Q96Q83 286 aaPredicted RBP12.21□□□□□ -0.45
LRRK1-202ENST00000525284 FIGNL2A6NMB9 653 aa12.21□□□□□ -0.45
LRRK1-202ENST00000525284 GNG7O60262 68 aa12.21□□□□□ -0.45
LRRK1-202ENST00000525284 PPP1R17O96001 155 aa12.21□□□□□ -0.45
LRRK1-202ENST00000525284 MDKP21741 143 aaPredicted RBP12.21□□□□□ -0.45
LRRK1-202ENST00000525284 HOXD9P28356 352 aaPredicted RBP12.21□□□□□ -0.45
LRRK1-202ENST00000525284 OTX1P32242 354 aaPredicted RBP12.21□□□□□ -0.45
LRRK1-202ENST00000525284 RPS4XP62701 263 aaKnown RBP12.21□□□□□ -0.45
LRRK1-202ENST00000525284 IL13RA2Q14627 380 aa12.21□□□□□ -0.45
LRRK1-202ENST00000525284 CLEC18BQ6UXF7 455 aa12.21□□□□□ -0.45
LRRK1-202ENST00000525284 WDFY1Q8IWB7 410 aa12.21□□□□□ -0.45
LRRK1-202ENST00000525284 TMEM183AQ8IXX5 376 aa12.21□□□□□ -0.45
LRRK1-202ENST00000525284 RNF133Q8WVZ7 376 aa12.21□□□□□ -0.45
LRRK1-202ENST00000525284 PERPQ96FX8 193 aa12.21□□□□□ -0.45
LRRK1-202ENST00000525284 URB1O60287 2271 aaKnown RBP12.21□□□□□ -0.45
LRRK1-202ENST00000525284 MYH3P11055 1940 aa12.21□□□□□ -0.45
LRRK1-202ENST00000525284 IL24Q13007 206 aa12.21□□□□□ -0.45
LRRK1-202ENST00000525284 OR13G1Q8NGZ3 307 aa12.21□□□□□ -0.45
LRRK1-202ENST00000525284 OIT3Q8WWZ8 545 aa12.21□□□□□ -0.45
LRRK1-202ENST00000525284 TIMP4Q99727 224 aa12.21□□□□□ -0.45
LRRK1-202ENST00000525284 DNAJC25-GNG10A0A024R161 153 aa12.21□□□□□ -0.46
LRRK1-202ENST00000525284 KIR2DS2P43631 304 aa12.21□□□□□ -0.46
LRRK1-202ENST00000525284 POLR2GP62487 172 aaKnown RBP eCLIP12.21□□□□□ -0.46
LRRK1-202ENST00000525284 DEFB109BQ30KR1 87 aa12.21□□□□□ -0.46
LRRK1-202ENST00000525284 CDCA3Q99618 268 aaPredicted RBP12.21□□□□□ -0.46
LRRK1-202ENST00000525284 C19orf53Q9UNZ5 99 aaPredicted RBP12.21□□□□□ -0.46
LRRK1-202ENST00000525284 TMEM272A0A1B0GTI8 110 aa12.21□□□□□ -0.46
LRRK1-202ENST00000525284 DNAL4O96015 105 aa12.21□□□□□ -0.46
LRRK1-202ENST00000525284 FZD2Q14332 565 aa12.21□□□□□ -0.46
LRRK1-202ENST00000525284 ZNF506Q5JVG8 444 aa12.21□□□□□ -0.46
LRRK1-202ENST00000525284 SLC25A30Q5SVS4 291 aa12.21□□□□□ -0.46
LRRK1-202ENST00000525284 TMEM136Q6ZRR5 245 aa12.21□□□□□ -0.46
LRRK1-202ENST00000525284 CCL17Q92583 94 aa12.21□□□□□ -0.46
LRRK1-202ENST00000525284 SLCO2B1O94956 709 aa12.2□□□□□ -0.46
LRRK1-202ENST00000525284 CD22P20273 847 aa12.2□□□□□ -0.46
LRRK1-202ENST00000525284 WNT5AP41221 380 aa12.2□□□□□ -0.46
LRRK1-202ENST00000525284 LDLRAD3Q86YD5 345 aa12.2□□□□□ -0.46
LRRK1-202ENST00000525284 PELI3Q8N2H9 469 aa12.2□□□□□ -0.46
LRRK1-202ENST00000525284 RGP1Q92546 391 aaPredicted RBP12.2□□□□□ -0.46
LRRK1-202ENST00000525284 PRR13Q9NZ81 148 aa12.2□□□□□ -0.46
LRRK1-202ENST00000525284 SIT1Q9Y3P8 196 aa12.2□□□□□ -0.46
LRRK1-202ENST00000525284 IGKV3D-11A0A0A0MRZ8 115 aa12.2□□□□□ -0.46
LRRK1-202ENST00000525284 HSPB2A8KAH6 182 aa12.2□□□□□ -0.46
LRRK1-202ENST00000525284 IGKV3-11P04433 115 aa12.2□□□□□ -0.46
LRRK1-202ENST00000525284 APELAP0DMC3 54 aa12.2□□□□□ -0.46
LRRK1-202ENST00000525284 LGALS3P17931 250 aaKnown RBP12.2□□□□□ -0.46
LRRK1-202ENST00000525284 MRPS21P82921 87 aaKnown RBP12.2□□□□□ -0.46
LRRK1-202ENST00000525284 DUSP8Q13202 625 aa12.2□□□□□ -0.46
LRRK1-202ENST00000525284 HSPB2Q16082 182 aa12.2□□□□□ -0.46
LRRK1-202ENST00000525284 MEIG1Q5JSS6 88 aa12.2□□□□□ -0.46
LRRK1-202ENST00000525284 LEMD1Q68G75 181 aa12.2□□□□□ -0.46
LRRK1-202ENST00000525284 PRNTQ86SH4 94 aa12.2□□□□□ -0.46
LRRK1-202ENST00000525284 RAB33BQ9H082 229 aa12.2□□□□□ -0.46
LRRK1-202ENST00000525284 TMEM38BQ9NVV0 291 aa12.2□□□□□ -0.46
LRRK1-202ENST00000525284 C7orf77A4D0Y5 90 aa12.2□□□□□ -0.46
LRRK1-202ENST00000525284 PAGE4O60829 102 aa12.2□□□□□ -0.46
LRRK1-202ENST00000525284 TMEM95Q3KNT9 176 aa12.2□□□□□ -0.46
LRRK1-202ENST00000525284 ZNF385CQ66K41 422 aaPredicted RBP12.2□□□□□ -0.46
LRRK1-202ENST00000525284 OR5M9Q8NGP3 310 aa12.2□□□□□ -0.46
LRRK1-202ENST00000525284 HSPB9Q9BQS6 159 aa12.2□□□□□ -0.46
LRRK1-202ENST00000525284 TRAV1-2A0A0B4J238 106 aa12.2□□□□□ -0.46
LRRK1-202ENST00000525284 GFYI3L273 518 aa12.2□□□□□ -0.46
LRRK1-202ENST00000525284 PRRX1P54821 245 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms