RNA–Protein interactions for RNA: ENST00000524023.1

HDAC9-228, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,199 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-228ENST00000524023 RIPPLY2Q5TAB7 128 aa9.58□□□□□ -0.88
HDAC9-228ENST00000524023 PLCXD3Q63HM9 321 aa9.58□□□□□ -0.88
HDAC9-228ENST00000524023 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.58□□□□□ -0.88
HDAC9-228ENST00000524023 SKA3Q8IX90 412 aa9.58□□□□□ -0.88
HDAC9-228ENST00000524023 OR8U1Q8NH10 309 aa9.58□□□□□ -0.88
HDAC9-228ENST00000524023 OR2V1Q8NHB1 315 aa9.58□□□□□ -0.88
HDAC9-228ENST00000524023 MAFAQ8NHW3 353 aaPredicted RBP9.58□□□□□ -0.88
HDAC9-228ENST00000524023 GLYATL2Q8WU03 294 aa9.58□□□□□ -0.88
HDAC9-228ENST00000524023 PIGCQ92535 297 aa9.58□□□□□ -0.88
HDAC9-228ENST00000524023 MOB3AQ96BX8 217 aa9.58□□□□□ -0.88
HDAC9-228ENST00000524023 MSI2Q96DH6 328 aaKnown RBP9.58□□□□□ -0.88
HDAC9-228ENST00000524023 TRIOBPQ9H2D6 2365 aa9.58□□□□□ -0.88
HDAC9-228ENST00000524023 TMEM265A0A087WTH1 108 aa9.58□□□□□ -0.88
HDAC9-228ENST00000524023 LRRC3CA6NJW4 275 aa9.58□□□□□ -0.88
HDAC9-228ENST00000524023 PATE3B3GLJ2 98 aa9.58□□□□□ -0.88
HDAC9-228ENST00000524023 DIRAS3O95661 229 aa9.58□□□□□ -0.88
HDAC9-228ENST00000524023 IGHEP01854 428 aa9.58□□□□□ -0.88
HDAC9-228ENST00000524023 TCN2P20062 427 aa9.58□□□□□ -0.88
HDAC9-228ENST00000524023 DUSP3P51452 185 aaPredicted RBP9.58□□□□□ -0.88
HDAC9-228ENST00000524023 UCP3P55916 312 aa9.58□□□□□ -0.88
HDAC9-228ENST00000524023 CLDN15P56746 228 aa9.58□□□□□ -0.88
HDAC9-228ENST00000524023 RPS18P62269 152 aaKnown RBP9.58□□□□□ -0.88
HDAC9-228ENST00000524023 Q0VFX4 171 aa9.58□□□□□ -0.88
HDAC9-228ENST00000524023 MALLQ13021 153 aa9.58□□□□□ -0.88
HDAC9-228ENST00000524023 FAM76BQ5HYJ3 339 aa9.58□□□□□ -0.88
HDAC9-228ENST00000524023 WIPI1Q5MNZ9 446 aaPredicted RBP9.58□□□□□ -0.88
HDAC9-228ENST00000524023 Q6ZPA2 131 aa9.58□□□□□ -0.88
HDAC9-228ENST00000524023 PPP1R32Q7Z5V6 425 aa9.58□□□□□ -0.88
HDAC9-228ENST00000524023 WDR5BQ86VZ2 330 aa9.58□□□□□ -0.88
HDAC9-228ENST00000524023 OR5L1Q8NGL2 311 aa9.58□□□□□ -0.88
HDAC9-228ENST00000524023 KIRREL1Q96J84 757 aa9.58□□□□□ -0.88
HDAC9-228ENST00000524023 SYT3Q9BQG1 590 aa9.58□□□□□ -0.88
HDAC9-228ENST00000524023 WFDC1Q9HC57 220 aa9.58□□□□□ -0.88
HDAC9-228ENST00000524023 FAM212BQ9NTI7 297 aaPredicted RBP9.58□□□□□ -0.88
HDAC9-228ENST00000524023 ZNF816-ZNF321PA0A0X1KG74 233 aa9.57□□□□□ -0.88
HDAC9-228ENST00000524023 ZNF587BE7ETH6 402 aa9.57□□□□□ -0.88
HDAC9-228ENST00000524023 XRCC2O43543 280 aa9.57□□□□□ -0.88
HDAC9-228ENST00000524023 GPR137BO60478 399 aa9.57□□□□□ -0.88
HDAC9-228ENST00000524023 TRAPPC6AO75865 159 aa9.57□□□□□ -0.88
HDAC9-228ENST00000524023 GLI4P10075 376 aa9.57□□□□□ -0.88
HDAC9-228ENST00000524023 EDN3P14138 238 aa9.57□□□□□ -0.88
HDAC9-228ENST00000524023 DUSP1P28562 367 aa9.57□□□□□ -0.88
HDAC9-228ENST00000524023 OTX2P32243 289 aa9.57□□□□□ -0.88
HDAC9-228ENST00000524023 RBM11P57052 281 aaKnown RBP9.57□□□□□ -0.88
HDAC9-228ENST00000524023 GPR157Q5UAW9 335 aa9.57□□□□□ -0.88
HDAC9-228ENST00000524023 TMEM211Q6ICI0 200 aa9.57□□□□□ -0.88
HDAC9-228ENST00000524023 CALHM1Q8IU99 346 aa9.57□□□□□ -0.88
HDAC9-228ENST00000524023 LGI3Q8N145 548 aa9.57□□□□□ -0.88
HDAC9-228ENST00000524023 OR11L1Q8NGX0 322 aa9.57□□□□□ -0.88
HDAC9-228ENST00000524023 STARD10Q9Y365 291 aa9.57□□□□□ -0.88
HDAC9-228ENST00000524023 MMP7P09237 267 aaPredicted RBP9.57□□□□□ -0.88
HDAC9-228ENST00000524023 SEC11BP0C7V7 166 aa9.57□□□□□ -0.88
HDAC9-228ENST00000524023 PRKACAP17612 351 aa9.57□□□□□ -0.88
HDAC9-228ENST00000524023 FUT3P21217 361 aa9.57□□□□□ -0.88
HDAC9-228ENST00000524023 AADACP22760 399 aa9.57□□□□□ -0.88
HDAC9-228ENST00000524023 GLP1RP43220 463 aa9.57□□□□□ -0.88
HDAC9-228ENST00000524023 RAB13P51153 203 aa9.57□□□□□ -0.88
HDAC9-228ENST00000524023 DAZAP2Q15038 168 aaPredicted RBP9.57□□□□□ -0.88
HDAC9-228ENST00000524023 OR52M1Q8NGK5 317 aa9.57□□□□□ -0.88
HDAC9-228ENST00000524023 SPSB4Q96A44 273 aa9.57□□□□□ -0.88
HDAC9-228ENST00000524023 TECTBQ96PL2 329 aa9.57□□□□□ -0.88
HDAC9-228ENST00000524023 RSRP1Q9BUV0 290 aa9.57□□□□□ -0.88
HDAC9-228ENST00000524023 PARP12Q9H0J9 701 aaKnown RBP9.57□□□□□ -0.88
HDAC9-228ENST00000524023 ZNF442Q9H7R0 627 aa9.57□□□□□ -0.88
HDAC9-228ENST00000524023 DEPPQ9NTK1 212 aa9.57□□□□□ -0.88
HDAC9-228ENST00000524023 ZDHHC8Q9ULC8 765 aa9.57□□□□□ -0.88
HDAC9-228ENST00000524023 BORCS7-ASMTA0A0B4J1R7 106 aa9.56□□□□□ -0.88
HDAC9-228ENST00000524023 MEX3AA1L020 520 aaKnown RBP9.56□□□□□ -0.88
HDAC9-228ENST00000524023 PHF1O43189 567 aaPredicted RBP9.56□□□□□ -0.88
HDAC9-228ENST00000524023 CYTIPO60759 359 aa9.56□□□□□ -0.88
HDAC9-228ENST00000524023 TSPAN15O95858 294 aa9.56□□□□□ -0.88
HDAC9-228ENST00000524023 DANCRP0C864 163 aa9.56□□□□□ -0.88
HDAC9-228ENST00000524023 PMELP40967 661 aa9.56□□□□□ -0.88
HDAC9-228ENST00000524023 P2RY1P47900 373 aa9.56□□□□□ -0.88
HDAC9-228ENST00000524023 HERV-K104P61576 105 aa9.56□□□□□ -0.88
HDAC9-228ENST00000524023 IL13RA2Q14627 380 aa9.56□□□□□ -0.88
HDAC9-228ENST00000524023 TRIM61Q5EBN2 209 aa9.56□□□□□ -0.88
HDAC9-228ENST00000524023 FBXW12Q6X9E4 464 aa9.56□□□□□ -0.88
HDAC9-228ENST00000524023 ZNF611Q8N823 705 aa9.56□□□□□ -0.88
HDAC9-228ENST00000524023 CCDC71LQ8N9Z2 235 aa9.56□□□□□ -0.88
HDAC9-228ENST00000524023 RXFP4Q8TDU9 374 aa9.56□□□□□ -0.88
HDAC9-228ENST00000524023 ABHD3Q8WU67 409 aa9.56□□□□□ -0.88
HDAC9-228ENST00000524023 ZNF845Q96IR2 970 aaPredicted RBP9.56□□□□□ -0.88
HDAC9-228ENST00000524023 AKR1E2Q96JD6 320 aa9.56□□□□□ -0.88
HDAC9-228ENST00000524023 GINS3Q9BRX5 216 aa9.56□□□□□ -0.88
HDAC9-228ENST00000524023 IER2Q9BTL4 223 aa9.56□□□□□ -0.88
HDAC9-228ENST00000524023 C1QTNF5Q9BXJ0 243 aa9.56□□□□□ -0.88
HDAC9-228ENST00000524023 RYDENQ9NUL5 291 aaKnown RBP9.56□□□□□ -0.88
HDAC9-228ENST00000524023 CACFD1Q9UGQ2 172 aa9.56□□□□□ -0.88
HDAC9-228ENST00000524023 DOCK10Q96BY6 2186 aa9.56□□□□□ -0.88
HDAC9-228ENST00000524023 ST8SIA3O43173 380 aa9.56□□□□□ -0.88
HDAC9-228ENST00000524023 OR7C1O76099 320 aaPredicted RBP9.56□□□□□ -0.88
HDAC9-228ENST00000524023 CRYBA1P05813 215 aa9.56□□□□□ -0.88
HDAC9-228ENST00000524023 SPP1P10451 314 aa9.56□□□□□ -0.88
HDAC9-228ENST00000524023 TDGF1P13385 188 aa9.56□□□□□ -0.88
HDAC9-228ENST00000524023 GDF1P27539 372 aa9.56□□□□□ -0.88
HDAC9-228ENST00000524023 SNCAP37840 140 aa9.56□□□□□ -0.88
HDAC9-228ENST00000524023 NPBWR2P48146 333 aa9.56□□□□□ -0.88
HDAC9-228ENST00000524023 HOXA1P49639 335 aaPredicted RBP9.56□□□□□ -0.88
HDAC9-228ENST00000524023 PEA15Q15121 130 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms