RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 DUX5Q96PT3 197 aa13.45□□□□□ -0.26
PABPC1-221ENST00000522720 METTL8Q9H825 291 aaKnown RBP13.45□□□□□ -0.26
PABPC1-221ENST00000522720 ZMAT3Q9HA38 289 aaKnown RBP13.45□□□□□ -0.26
PABPC1-221ENST00000522720 NOX4Q9NPH5 578 aa13.45□□□□□ -0.26
PABPC1-221ENST00000522720 SIRT7Q9NRC8 400 aa13.45□□□□□ -0.26
PABPC1-221ENST00000522720 RBFOX1Q9NWB1 397 aaKnown RBP13.45□□□□□ -0.26
PABPC1-221ENST00000522720 FKBP14Q9NWM8 211 aa13.45□□□□□ -0.26
PABPC1-221ENST00000522720 ZNF281Q9Y2X9 895 aa13.45□□□□□ -0.26
PABPC1-221ENST00000522720 TENM1Q9UKZ4 2725 aa13.44□□□□□ -0.26
PABPC1-221ENST00000522720 IGKV1-12A0A0C4DH73 117 aa13.44□□□□□ -0.26
PABPC1-221ENST00000522720 RNASEK-C17orf49H0YIS7 233 aa13.44□□□□□ -0.26
PABPC1-221ENST00000522720 ANGPTL7O43827 346 aa13.44□□□□□ -0.26
PABPC1-221ENST00000522720 IGKV1D-12P01611 117 aa13.44□□□□□ -0.26
PABPC1-221ENST00000522720 HCKP08631 526 aa13.44□□□□□ -0.26
PABPC1-221ENST00000522720 GUCA2AQ02747 115 aa13.44□□□□□ -0.26
PABPC1-221ENST00000522720 BLMHQ13867 455 aa13.44□□□□□ -0.26
PABPC1-221ENST00000522720 SLC9A3R2Q15599 337 aa13.44□□□□□ -0.26
PABPC1-221ENST00000522720 KISS1Q15726 138 aa13.44□□□□□ -0.26
PABPC1-221ENST00000522720 C6orf141Q5SZD1 244 aa13.44□□□□□ -0.26
PABPC1-221ENST00000522720 TMEM200BQ69YZ2 307 aa13.44□□□□□ -0.26
PABPC1-221ENST00000522720 ASPHD2Q6ICH7 369 aa13.44□□□□□ -0.26
PABPC1-221ENST00000522720 FIP1L1Q6UN15 594 aaKnown RBP13.44□□□□□ -0.26
PABPC1-221ENST00000522720 Q6YL49 198 aa13.44□□□□□ -0.26
PABPC1-221ENST00000522720 PDZD9Q8IXQ8 264 aa13.44□□□□□ -0.26
PABPC1-221ENST00000522720 ASCC1Q8N9N2 400 aaKnown RBP13.44□□□□□ -0.26
PABPC1-221ENST00000522720 ZSCAN4Q8NAM6 433 aaPredicted RBP13.44□□□□□ -0.26
PABPC1-221ENST00000522720 OR4M1Q8NGD0 313 aa13.44□□□□□ -0.26
PABPC1-221ENST00000522720 OR5D18Q8NGL1 313 aa13.44□□□□□ -0.26
PABPC1-221ENST00000522720 GHSRQ92847 366 aa13.44□□□□□ -0.26
PABPC1-221ENST00000522720 SNX22Q96L94 193 aa13.44□□□□□ -0.26
PABPC1-221ENST00000522720 RHOFQ9HBH0 211 aa13.44□□□□□ -0.26
PABPC1-221ENST00000522720 HMG20AQ9NP66 347 aa13.44□□□□□ -0.26
PABPC1-221ENST00000522720 IL36RNQ9UBH0 155 aa13.44□□□□□ -0.26
PABPC1-221ENST00000522720 A0A1W2PPH5 198 aa13.43□□□□□ -0.26
PABPC1-221ENST00000522720 TMEM82A0PJX8 343 aa13.43□□□□□ -0.26
PABPC1-221ENST00000522720 TMEM89A2RUT3 159 aa13.43□□□□□ -0.26
PABPC1-221ENST00000522720 KDM4BO94953 1096 aa13.43□□□□□ -0.26
PABPC1-221ENST00000522720 HAND1O96004 215 aa13.43□□□□□ -0.26
PABPC1-221ENST00000522720 RNASE1P07998 156 aaKnown RBP13.43□□□□□ -0.26
PABPC1-221ENST00000522720 TMEM225BP0DP42 221 aa13.43□□□□□ -0.26
PABPC1-221ENST00000522720 PRKACAP17612 351 aa13.43□□□□□ -0.26
PABPC1-221ENST00000522720 RAB3AP20336 220 aa13.43□□□□□ -0.26
PABPC1-221ENST00000522720 DUSP1P28562 367 aa13.43□□□□□ -0.26
PABPC1-221ENST00000522720 DLX1P56177 255 aa13.43□□□□□ -0.26
PABPC1-221ENST00000522720 ZP1P60852 638 aa13.43□□□□□ -0.26
PABPC1-221ENST00000522720 ACTG1P63261 375 aa13.43□□□□□ -0.26
PABPC1-221ENST00000522720 PRB3Q04118 309 aaPredicted RBP13.43□□□□□ -0.26
PABPC1-221ENST00000522720 SPIN3Q5JUX0 258 aa13.43□□□□□ -0.26
PABPC1-221ENST00000522720 NCR3LG1Q68D85 454 aa13.43□□□□□ -0.26
PABPC1-221ENST00000522720 C17orf107Q6ZR85 190 aa13.43□□□□□ -0.26
PABPC1-221ENST00000522720 OR8H2Q8N162 312 aa13.43□□□□□ -0.26
PABPC1-221ENST00000522720 PIP4P2Q8N4L2 257 aa13.43□□□□□ -0.26
PABPC1-221ENST00000522720 OR5D13Q8NGL4 314 aa13.43□□□□□ -0.26
PABPC1-221ENST00000522720 GCDHQ92947 438 aaPredicted RBP13.43□□□□□ -0.26
PABPC1-221ENST00000522720 TMEM106AQ96A25 262 aa13.43□□□□□ -0.26
PABPC1-221ENST00000522720 SLC25A28Q96A46 364 aa13.43□□□□□ -0.26
PABPC1-221ENST00000522720 SCN3BQ9NY72 215 aa13.43□□□□□ -0.26
PABPC1-221ENST00000522720 TRBV5-5A0A0J9YX44 114 aa13.42□□□□□ -0.26
PABPC1-221ENST00000522720 MAGEB3O15480 346 aa13.42□□□□□ -0.26
PABPC1-221ENST00000522720 CALCBP10092 127 aa13.42□□□□□ -0.26
PABPC1-221ENST00000522720 WNT4P56705 351 aa13.42□□□□□ -0.26
PABPC1-221ENST00000522720 TAS2R43P59537 309 aa13.42□□□□□ -0.26
PABPC1-221ENST00000522720 RNLSQ5VYX0 342 aa13.42□□□□□ -0.26
PABPC1-221ENST00000522720 GDPD3Q7L5L3 318 aa13.42□□□□□ -0.26
PABPC1-221ENST00000522720 C11orf42Q8N5U0 333 aa13.42□□□□□ -0.26
PABPC1-221ENST00000522720 NANOGP1Q8N7R0 232 aa13.42□□□□□ -0.26
PABPC1-221ENST00000522720 ZFP41Q8N8Y5 198 aa13.42□□□□□ -0.26
PABPC1-221ENST00000522720 OR51A2Q8NGJ7 313 aa13.42□□□□□ -0.26
PABPC1-221ENST00000522720 PGLYRP3Q96LB9 341 aa13.42□□□□□ -0.26
PABPC1-221ENST00000522720 NR1H4Q96RI1 486 aaPredicted RBP13.42□□□□□ -0.26
PABPC1-221ENST00000522720 TAS2R4Q9NYW5 299 aa13.42□□□□□ -0.26
PABPC1-221ENST00000522720 GLS2Q9UI32 602 aa13.42□□□□□ -0.26
PABPC1-221ENST00000522720 BLOC1S6Q9UL45 172 aa13.42□□□□□ -0.26
PABPC1-221ENST00000522720 A0A0U1RQK1 487 aa13.41□□□□□ -0.26
PABPC1-221ENST00000522720 SH2D1BO14796 132 aa13.41□□□□□ -0.26
PABPC1-221ENST00000522720 MYL12BO14950 172 aa13.41□□□□□ -0.26
PABPC1-221ENST00000522720 NPFFO15130 113 aa13.41□□□□□ -0.26
PABPC1-221ENST00000522720 HOXA3O43365 443 aaPredicted RBP13.41□□□□□ -0.26
PABPC1-221ENST00000522720 ALDOBP05062 364 aa13.41□□□□□ -0.26
PABPC1-221ENST00000522720 CDK1P06493 297 aa13.41□□□□□ -0.26
PABPC1-221ENST00000522720 EEF1B2P24534 225 aaKnown RBP13.41□□□□□ -0.26
PABPC1-221ENST00000522720 COMPP49747 757 aaPredicted RBP13.41□□□□□ -0.26
PABPC1-221ENST00000522720 UBE2E1P51965 193 aa13.41□□□□□ -0.26
PABPC1-221ENST00000522720 RPS11P62280 158 aaKnown RBP eCLIP13.41□□□□□ -0.26
PABPC1-221ENST00000522720 KLRD1Q13241 179 aa13.41□□□□□ -0.26
PABPC1-221ENST00000522720 YIF1BQ5BJH7 314 aa13.41□□□□□ -0.26
PABPC1-221ENST00000522720 RBM48Q5RL73 367 aaKnown RBP13.41□□□□□ -0.26
PABPC1-221ENST00000522720 OR52N4Q8NGI2 321 aa13.41□□□□□ -0.26
PABPC1-221ENST00000522720 OR13C5Q8NGS8 318 aa13.41□□□□□ -0.26
PABPC1-221ENST00000522720 CPNE2Q96FN4 548 aaPredicted RBP13.41□□□□□ -0.26
PABPC1-221ENST00000522720 ERGIC3Q9Y282 383 aa13.41□□□□□ -0.26
PABPC1-221ENST00000522720 GSTK1Q9Y2Q3 226 aa13.41□□□□□ -0.26
PABPC1-221ENST00000522720 TPRKBQ9Y3C4 175 aa13.41□□□□□ -0.26
PABPC1-221ENST00000522720 KIAA2026Q5HYC2 2103 aa13.4□□□□□ -0.26
PABPC1-221ENST00000522720 hCG_1809904A0A1W2PP81 198 aa13.4□□□□□ -0.26
PABPC1-221ENST00000522720 A0A1W2PPE2 198 aa13.4□□□□□ -0.26
PABPC1-221ENST00000522720 A0A1W2PR64 198 aa13.4□□□□□ -0.26
PABPC1-221ENST00000522720 A0A1W2PRV1 198 aa13.4□□□□□ -0.26
PABPC1-221ENST00000522720 PTGES3LE9PB15 166 aa13.4□□□□□ -0.26
PABPC1-221ENST00000522720 PSPNO60542 156 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms