RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 DPTQ07507 201 aa3.05□□□□□ -1.92
SKP1-209ENST00000522552 CD47Q08722 323 aa3.05□□□□□ -1.92
SKP1-209ENST00000522552 TCP10Q12799 353 aa3.05□□□□□ -1.92
SKP1-209ENST00000522552 HERPUD1Q15011 391 aa3.05□□□□□ -1.92
SKP1-209ENST00000522552 PMVKQ15126 192 aa3.05□□□□□ -1.92
SKP1-209ENST00000522552 PYCR3Q53H96 274 aa3.05□□□□□ -1.92
SKP1-209ENST00000522552 FAM162BQ5T6X4 162 aa3.05□□□□□ -1.92
SKP1-209ENST00000522552 CLEC19AQ6UXS0 136 aa3.05□□□□□ -1.92
SKP1-209ENST00000522552 TMUB2Q71RG4 321 aa3.05□□□□□ -1.92
SKP1-209ENST00000522552 Q8NBF4 154 aa3.05□□□□□ -1.92
SKP1-209ENST00000522552 OR10D3Q8NH80 312 aa3.05□□□□□ -1.92
SKP1-209ENST00000522552 OR1S1Q8NH92 325 aa3.05□□□□□ -1.92
SKP1-209ENST00000522552 LMO3Q8TAP4 145 aa3.05□□□□□ -1.92
SKP1-209ENST00000522552 NPRL2Q8WTW4 380 aa3.05□□□□□ -1.92
SKP1-209ENST00000522552 TM4SF18Q96CE8 201 aa3.05□□□□□ -1.92
SKP1-209ENST00000522552 RPUSD4Q96CM3 377 aaKnown RBP3.05□□□□□ -1.92
SKP1-209ENST00000522552 AURKBQ96GD4 344 aaPredicted RBP3.05□□□□□ -1.92
SKP1-209ENST00000522552 BTF3L4Q96K17 158 aa3.05□□□□□ -1.92
SKP1-209ENST00000522552 SPACA5Q96QH8 159 aa3.05□□□□□ -1.92
SKP1-209ENST00000522552 OR5M11Q96RB7 305 aa3.05□□□□□ -1.92
SKP1-209ENST00000522552 ZNF184Q99676 751 aaPredicted RBP3.05□□□□□ -1.92
SKP1-209ENST00000522552 ARHGDIGQ99819 225 aa3.05□□□□□ -1.92
SKP1-209ENST00000522552 EBF4Q9BQW3 602 aa3.05□□□□□ -1.92
SKP1-209ENST00000522552 POLR2J2Q9GZM3 115 aaKnown RBP3.05□□□□□ -1.92
SKP1-209ENST00000522552 CHST5Q9GZS9 411 aa3.05□□□□□ -1.92
SKP1-209ENST00000522552 POLR2J3Q9H1A7 115 aaKnown RBP3.05□□□□□ -1.92
SKP1-209ENST00000522552 DCSTAMPQ9H295 470 aa3.05□□□□□ -1.92
SKP1-209ENST00000522552 POMKQ9H5K3 350 aa3.05□□□□□ -1.92
SKP1-209ENST00000522552 SLCO1B3Q9NPD5 702 aa3.05□□□□□ -1.92
SKP1-209ENST00000522552 SLC7A10Q9NS82 523 aa3.05□□□□□ -1.92
SKP1-209ENST00000522552 OR12D3Q9UGF7 316 aa3.05□□□□□ -1.92
SKP1-209ENST00000522552 A0A087WWV3 80 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 IGHV1-69DA0A0B4J2H0 117 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 A0A0U1RQV1 116 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 OR6C6A6NF89 314 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 OR11H12B2RN74 326 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 PDCD6O75340 191 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 KBTBD11O94819 623 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 ALPLP05186 524 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 LINC00614P0C842 121 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 CHTF8P0CG12 524 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 ESDP10768 282 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 CXCL2P19875 107 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 RAB3AP20336 220 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 ELK4P28324 431 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 MIPP30301 263 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 SLC6A1P30531 599 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 C1QTNF8P60827 252 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 SPATA31B1PQ5VZV4 182 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 DNAJC24Q6P3W2 148 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 PLET1Q6UQ28 207 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 IGFL2Q6UWQ7 119 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 FBXW12Q6X9E4 464 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 C9orf47Q6ZRZ4 202 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 NAA40Q86UY6 237 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 SMIM20Q8N5G0 67 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 SLC26A10Q8NG04 563 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 OR11H1Q8NG94 326 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 OR10K1Q8NGX5 313 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 OR11H2Q8NH07 326 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 OR4S2Q8NH73 311 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 MAFIPQ8WZ33 124 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 CCL17Q92583 94 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 SLC29A3Q9BZD2 475 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 Q9H3A6 140 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 NMNAT1Q9HAN9 279 aaPredicted RBP3.04□□□□□ -1.92
SKP1-209ENST00000522552 CACNG5Q9UF02 275 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 ENOPH1Q9UHY7 261 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 ZNF223Q9UK11 482 aaPredicted RBP3.04□□□□□ -1.92
SKP1-209ENST00000522552 UFC1Q9Y3C8 167 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 FAM32AQ9Y421 112 aaKnown RBP3.04□□□□□ -1.92
SKP1-209ENST00000522552 CLUHO75153 1309 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 ZBED9Q6R2W3 1325 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 IGHV3-35A0A0C4DH35 117 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 IGKV1-8A0A0C4DH67 115 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 H3BP45 60 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 PSPHP1O15172 72 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 PGAM2P15259 253 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 PSMB1P20618 241 aaKnown RBP3.04□□□□□ -1.92
SKP1-209ENST00000522552 COX7A1P24310 79 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 PSMB2P49721 201 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 P2RY4P51582 365 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 BTN3A2P78410 334 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 RUNX3Q13761 415 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 IHHQ14623 411 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 SPCS2Q15005 226 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 GUCA2BQ16661 112 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 GSG1Q2KHT4 349 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 ACOT6Q3I5F7 207 aaPredicted RBP3.04□□□□□ -1.92
SKP1-209ENST00000522552 C6orf99Q4VX62 202 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 ZNF684Q5T5D7 378 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 RSBN1Q5VWQ0 802 aaPredicted RBP3.04□□□□□ -1.92
SKP1-209ENST00000522552 OTPQ5XKR4 325 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 ZNF493Q6ZR52 646 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 DPPA2Q7Z7J5 298 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 CALHM3Q86XJ0 350 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 OR4X1Q8NH49 305 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 MFSD8Q8NHS3 518 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 UCN3Q969E3 161 aa3.04□□□□□ -1.92
SKP1-209ENST00000522552 TMEM159Q96B96 161 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms