RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 RAB18Q9NP72 206 aa8.82□□□□□ -1
MCF2-209ENST00000520602 PNRC2Q9NPJ4 139 aaKnown RBP8.82□□□□□ -1
MCF2-209ENST00000520602 KIF25Q9UIL4 384 aa8.82□□□□□ -1
MCF2-209ENST00000520602 GPR132Q9UNW8 380 aa8.82□□□□□ -1
MCF2-209ENST00000520602 DNAH14Q0VDD8 3507 aa8.82□□□□□ -1
MCF2-209ENST00000520602 ZNF716A6NP11 495 aa8.82□□□□□ -1
MCF2-209ENST00000520602 SYNGR3O43761 229 aa8.82□□□□□ -1
MCF2-209ENST00000520602 NEURL1O76050 574 aa8.82□□□□□ -1
MCF2-209ENST00000520602 CALCRP30988 508 aa8.82□□□□□ -1
MCF2-209ENST00000520602 FOXG1P55316 489 aaPredicted RBP8.82□□□□□ -1
MCF2-209ENST00000520602 GNG3P63215 75 aa8.82□□□□□ -1
MCF2-209ENST00000520602 HNF4GQ14541 408 aa8.82□□□□□ -1
MCF2-209ENST00000520602 ASB13Q8WXK3 278 aa8.82□□□□□ -1
MCF2-209ENST00000520602 CNTNAP3BQ96NU0 1288 aa8.82□□□□□ -1
MCF2-209ENST00000520602 C5orf66Q9H5L9 145 aa8.82□□□□□ -1
MCF2-209ENST00000520602 TAF9BQ9HBM6 251 aa8.82□□□□□ -1
MCF2-209ENST00000520602 ZFP57Q9NU63 452 aa8.82□□□□□ -1
MCF2-209ENST00000520602 MYO7BQ6PIF6 2116 aa8.81□□□□□ -1
MCF2-209ENST00000520602 A0A0A6YYD4 124 aa8.81□□□□□ -1
MCF2-209ENST00000520602 TRAV17A0A0B4J275 112 aa8.81□□□□□ -1
MCF2-209ENST00000520602 FIGNL2A6NMB9 653 aa8.81□□□□□ -1
MCF2-209ENST00000520602 ST8SIA3O43173 380 aa8.81□□□□□ -1
MCF2-209ENST00000520602 WDR1O75083 606 aa8.81□□□□□ -1
MCF2-209ENST00000520602 TSPAN9O75954 239 aa8.81□□□□□ -1
MCF2-209ENST00000520602 ONECUT2O95948 504 aa8.81□□□□□ -1
MCF2-209ENST00000520602 RRASP10301 218 aa8.81□□□□□ -1
MCF2-209ENST00000520602 GABRA2P47869 451 aa8.81□□□□□ -1
MCF2-209ENST00000520602 NPBWR2P48146 333 aa8.81□□□□□ -1
MCF2-209ENST00000520602 VAX1Q5SQQ9 334 aa8.81□□□□□ -1
MCF2-209ENST00000520602 GGNQ86UU5 652 aa8.81□□□□□ -1
MCF2-209ENST00000520602 MARC2Q969Z3 335 aa8.81□□□□□ -1
MCF2-209ENST00000520602 NABP1Q96AH0 204 aa8.81□□□□□ -1
MCF2-209ENST00000520602 SPACA1Q9HBV2 294 aa8.81□□□□□ -1
MCF2-209ENST00000520602 BDP1A6H8Y1 2624 aa8.81□□□□□ -1
MCF2-209ENST00000520602 FER1L5A0AVI2 2057 aa8.81□□□□□ -1
MCF2-209ENST00000520602 TUSC2O75896 110 aa8.81□□□□□ -1
MCF2-209ENST00000520602 ACTL6AO96019 429 aa8.81□□□□□ -1
MCF2-209ENST00000520602 MELTFP08582 738 aa8.81□□□□□ -1
MCF2-209ENST00000520602 FTH1P19P0C7X4 201 aa8.81□□□□□ -1
MCF2-209ENST00000520602 ASCL1P50553 236 aa8.81□□□□□ -1
MCF2-209ENST00000520602 GGNBP1Q5YKI7 109 aa8.81□□□□□ -1
MCF2-209ENST00000520602 OR10AD1Q8NGE0 317 aa8.81□□□□□ -1
MCF2-209ENST00000520602 SNIP1Q8TAD8 396 aaKnown RBP8.81□□□□□ -1
MCF2-209ENST00000520602 KIRREL1Q96J84 757 aa8.81□□□□□ -1
MCF2-209ENST00000520602 PRO3102Q9H379 93 aa8.81□□□□□ -1
MCF2-209ENST00000520602 LDLRAD4O15165 306 aa8.81□□□□□ -1
MCF2-209ENST00000520602 RAC2P15153 192 aa8.81□□□□□ -1
MCF2-209ENST00000520602 RAB2AP61019 212 aa8.81□□□□□ -1
MCF2-209ENST00000520602 EDDM3AQ14507 147 aa8.81□□□□□ -1
MCF2-209ENST00000520602 MDP1Q86V88 176 aa8.81□□□□□ -1
MCF2-209ENST00000520602 KCNRGQ8N5I3 272 aa8.81□□□□□ -1
MCF2-209ENST00000520602 ZBTB44Q8NCP5 570 aa8.81□□□□□ -1
MCF2-209ENST00000520602 TECTBQ96PL2 329 aa8.81□□□□□ -1
MCF2-209ENST00000520602 SLC25A32Q9H2D1 315 aa8.81□□□□□ -1
MCF2-209ENST00000520602 MLXQ9UH92 298 aa8.81□□□□□ -1
MCF2-209ENST00000520602 PPP1R3CQ9UQK1 317 aa8.81□□□□□ -1
MCF2-209ENST00000520602 LINC00862A6NCI5 91 aa8.8□□□□□ -1
MCF2-209ENST00000520602 ZNF806P0C7X5 589 aa8.8□□□□□ -1
MCF2-209ENST00000520602 ZNF735P0CB33 412 aa8.8□□□□□ -1
MCF2-209ENST00000520602 ALKBH6Q3KRA9 238 aa8.8□□□□□ -1
MCF2-209ENST00000520602 FBXW9Q5XUX1 488 aa8.8□□□□□ -1
MCF2-209ENST00000520602 CPEB3Q8NE35 698 aaKnown RBP8.8□□□□□ -1
MCF2-209ENST00000520602 MRPL24Q96A35 216 aaKnown RBP8.8□□□□□ -1
MCF2-209ENST00000520602 MRPS24Q96EL2 167 aaKnown RBP8.8□□□□□ -1
MCF2-209ENST00000520602 NARFLQ9H6Q4 476 aa8.8□□□□□ -1
MCF2-209ENST00000520602 FOXD3Q9UJU5 478 aaPredicted RBP8.8□□□□□ -1
MCF2-209ENST00000520602 PCNX1Q96RV3 2341 aa8.8□□□□□ -1
MCF2-209ENST00000520602 ETV2O00321 342 aaPredicted RBP8.8□□□□□ -1
MCF2-209ENST00000520602 KLK10O43240 276 aa8.8□□□□□ -1
MCF2-209ENST00000520602 MPGP29372 298 aa8.8□□□□□ -1
MCF2-209ENST00000520602 RPUSD3Q6P087 351 aaKnown RBP8.8□□□□□ -1
MCF2-209ENST00000520602 FAM58AQ8N1B3 248 aa8.8□□□□□ -1
MCF2-209ENST00000520602 MUCL1Q96DR8 90 aa8.8□□□□□ -1
MCF2-209ENST00000520602 Q96M66 194 aa8.8□□□□□ -1
MCF2-209ENST00000520602 ESRP2Q9H6T0 727 aaKnown RBP8.8□□□□□ -1
MCF2-209ENST00000520602 FANCFQ9NPI8 374 aa8.8□□□□□ -1
MCF2-209ENST00000520602 NPTNQ9Y639 398 aa8.8□□□□□ -1
MCF2-209ENST00000520602 V9GYS6 101 aa8.8□□□□□ -1
MCF2-209ENST00000520602 AGFG2O95081 481 aa8.8□□□□□ -1
MCF2-209ENST00000520602 FCGR3AP08637 254 aa8.8□□□□□ -1
MCF2-209ENST00000520602 AADACP22760 399 aa8.8□□□□□ -1
MCF2-209ENST00000520602 NKX2-1P43699 371 aaPredicted RBP8.8□□□□□ -1
MCF2-209ENST00000520602 ANKRD55Q3KP44 614 aa8.8□□□□□ -1
MCF2-209ENST00000520602 OR2B11Q5JQS5 317 aa8.8□□□□□ -1
MCF2-209ENST00000520602 ZNF660Q6AZW8 331 aaPredicted RBP8.8□□□□□ -1
MCF2-209ENST00000520602 SCGB1C1Q8TD33 95 aa8.8□□□□□ -1
MCF2-209ENST00000520602 GPHA2Q96T91 129 aa8.8□□□□□ -1
MCF2-209ENST00000520602 IFNA5P01569 189 aa8.79□□□□□ -1
MCF2-209ENST00000520602 NMBP08949 121 aa8.79□□□□□ -1
MCF2-209ENST00000520602 HIST3H3Q16695 136 aa8.79□□□□□ -1
MCF2-209ENST00000520602 PXDC1Q5TGL8 231 aa8.79□□□□□ -1
MCF2-209ENST00000520602 CALHM1Q8IU99 346 aa8.79□□□□□ -1
MCF2-209ENST00000520602 OR11L1Q8NGX0 322 aa8.79□□□□□ -1
MCF2-209ENST00000520602 RNF150Q9ULK6 438 aa8.79□□□□□ -1
MCF2-209ENST00000520602 TNFSF18Q9UNG2 199 aa8.79□□□□□ -1
MCF2-209ENST00000520602 POLDIP2Q9Y2S7 368 aa8.79□□□□□ -1
MCF2-209ENST00000520602 ADAMTS9Q9P2N4 1935 aa8.79□□□□□ -1
MCF2-209ENST00000520602 NCOA6Q14686 2063 aaPredicted RBP8.79□□□□□ -1
MCF2-209ENST00000520602 CDIPTO14735 213 aa8.79□□□□□ -1
MCF2-209ENST00000520602 RBM11P57052 281 aaKnown RBP8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms