RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 IL3RAP26951 378 aa2.6□□□□□ -1.99
SQLE-204ENST00000520493 COILP38432 576 aaPredicted RBP2.6□□□□□ -1.99
SQLE-204ENST00000520493 TGM4P49221 684 aa2.6□□□□□ -1.99
SQLE-204ENST00000520493 CCR6P51684 374 aa2.6□□□□□ -1.99
SQLE-204ENST00000520493 PPP1CAP62136 330 aa2.6□□□□□ -1.99
SQLE-204ENST00000520493 HBG1P69891 147 aa2.6□□□□□ -1.99
SQLE-204ENST00000520493 HBG2P69892 147 aa2.6□□□□□ -1.99
SQLE-204ENST00000520493 Q499Y3 187 aa2.6□□□□□ -1.99
SQLE-204ENST00000520493 SMUG1Q53HV7 270 aa2.6□□□□□ -1.99
SQLE-204ENST00000520493 CLLU1OSQ5K130 101 aa2.6□□□□□ -1.99
SQLE-204ENST00000520493 FAM162BQ5T6X4 162 aa2.6□□□□□ -1.99
SQLE-204ENST00000520493 NTM-AS1Q6ZSK4 140 aa2.6□□□□□ -1.99
SQLE-204ENST00000520493 SLC13A5Q86YT5 568 aaPredicted RBP2.6□□□□□ -1.99
SQLE-204ENST00000520493 PGAM4Q8N0Y7 254 aa2.6□□□□□ -1.99
SQLE-204ENST00000520493 LINC00337Q8N6G1 96 aa2.6□□□□□ -1.99
SQLE-204ENST00000520493 OR2M7Q8NG81 312 aa2.6□□□□□ -1.99
SQLE-204ENST00000520493 OR52E4Q8NGH9 312 aa2.6□□□□□ -1.99
SQLE-204ENST00000520493 ZNF420Q8TAQ5 688 aaPredicted RBP2.6□□□□□ -1.99
SQLE-204ENST00000520493 ORAOV1Q8WV07 137 aa2.6□□□□□ -1.99
SQLE-204ENST00000520493 RNF133Q8WVZ7 376 aa2.6□□□□□ -1.99
SQLE-204ENST00000520493 ZNF799Q96GE5 643 aa2.6□□□□□ -1.99
SQLE-204ENST00000520493 PGLYRP3Q96LB9 341 aa2.6□□□□□ -1.99
SQLE-204ENST00000520493 GPR22Q99680 433 aa2.6□□□□□ -1.99
SQLE-204ENST00000520493 FGF23Q9GZV9 251 aaPredicted RBP2.6□□□□□ -1.99
SQLE-204ENST00000520493 NSRP1Q9H0G5 558 aaKnown RBP2.6□□□□□ -1.99
SQLE-204ENST00000520493 C12orf10Q9HB07 376 aa2.6□□□□□ -1.99
SQLE-204ENST00000520493 ZNF331Q9NQX6 463 aaPredicted RBP2.6□□□□□ -1.99
SQLE-204ENST00000520493 TAS2R13Q9NYV9 303 aa2.6□□□□□ -1.99
SQLE-204ENST00000520493 ZNRD1Q9P1U0 126 aa2.6□□□□□ -1.99
SQLE-204ENST00000520493 PRG3Q9Y2Y8 225 aaPredicted RBP2.6□□□□□ -1.99
SQLE-204ENST00000520493 MTCH2Q9Y6C9 303 aa2.6□□□□□ -1.99
SQLE-204ENST00000520493 WSB1Q9Y6I7 421 aa2.6□□□□□ -1.99
SQLE-204ENST00000520493 DYSFO75923 2080 aa2.6□□□□□ -1.99
SQLE-204ENST00000520493 BRD4O60885 1362 aaPredicted RBP2.6□□□□□ -1.99
SQLE-204ENST00000520493 A0A1W2PP18 115 aa2.59□□□□□ -1.99
SQLE-204ENST00000520493 PGPA6NDG6 321 aa2.59□□□□□ -1.99
SQLE-204ENST00000520493 SMIM23A6NLE4 172 aa2.59□□□□□ -1.99
SQLE-204ENST00000520493 CENPBD1B2RD01 187 aa2.59□□□□□ -1.99
SQLE-204ENST00000520493 H0YJW9 148 aa2.59□□□□□ -1.99
SQLE-204ENST00000520493 SPAG7O75391 227 aa2.59□□□□□ -1.99
SQLE-204ENST00000520493 CECR9P0C854 216 aa2.59□□□□□ -1.99
SQLE-204ENST00000520493 SLC2A1P11166 492 aa2.59□□□□□ -1.99
SQLE-204ENST00000520493 ATF1P18846 271 aa2.59□□□□□ -1.99
SQLE-204ENST00000520493 GRB2P62993 217 aaKnown RBP2.59□□□□□ -1.99
SQLE-204ENST00000520493 FAM3AP98173 230 aa2.59□□□□□ -1.99
SQLE-204ENST00000520493 PRDX1Q06830 199 aaKnown RBP2.59□□□□□ -1.99
SQLE-204ENST00000520493 ITGB3BPQ13352 177 aaPredicted RBP2.59□□□□□ -1.99
SQLE-204ENST00000520493 CLEC12BQ2HXU8 276 aa2.59□□□□□ -1.99
SQLE-204ENST00000520493 TBC1D28Q2M2D7 210 aa2.59□□□□□ -1.99
SQLE-204ENST00000520493 GOLGA7BQ2TAP0 167 aa2.59□□□□□ -1.99
SQLE-204ENST00000520493 LINC00303Q3SY05 128 aa2.59□□□□□ -1.99
SQLE-204ENST00000520493 ZNF404Q494X3 552 aa2.59□□□□□ -1.99
SQLE-204ENST00000520493 PAGE2Q7Z2X7 111 aa2.59□□□□□ -1.99
SQLE-204ENST00000520493 RIMKLAQ8IXN7 391 aa2.59□□□□□ -1.99
SQLE-204ENST00000520493 BLIDQ8IZY5 108 aa2.59□□□□□ -1.99
SQLE-204ENST00000520493 ZNF786Q8N393 782 aa2.59□□□□□ -1.99
SQLE-204ENST00000520493 C2orf73Q8N5S3 287 aaPredicted RBP2.59□□□□□ -1.99
SQLE-204ENST00000520493 ZNF433Q8N7K0 673 aaPredicted RBP2.59□□□□□ -1.99
SQLE-204ENST00000520493 OR4K5Q8NGD3 323 aa2.59□□□□□ -1.99
SQLE-204ENST00000520493 OR5W2Q8NH69 310 aa2.59□□□□□ -1.99
SQLE-204ENST00000520493 ZNF461Q8TAF7 563 aa2.59□□□□□ -1.99
SQLE-204ENST00000520493 CCL17Q92583 94 aa2.59□□□□□ -1.99
SQLE-204ENST00000520493 SMIM19Q96E16 107 aa2.59□□□□□ -1.99
SQLE-204ENST00000520493 PDXPQ96GD0 296 aa2.59□□□□□ -1.99
SQLE-204ENST00000520493 NARS2Q96I59 477 aaKnown RBP2.59□□□□□ -1.99
SQLE-204ENST00000520493 RBP7Q96R05 134 aa2.59□□□□□ -1.99
SQLE-204ENST00000520493 ZNF382Q96SR6 550 aa2.59□□□□□ -1.99
SQLE-204ENST00000520493 FAAP24Q9BTP7 215 aa2.59□□□□□ -1.99
SQLE-204ENST00000520493 MRPL20Q9BYC9 149 aaKnown RBP2.59□□□□□ -1.99
SQLE-204ENST00000520493 POMKQ9H5K3 350 aa2.59□□□□□ -1.99
SQLE-204ENST00000520493 LRRC19Q9H756 370 aa2.59□□□□□ -1.99
SQLE-204ENST00000520493 PARP11Q9NR21 331 aa2.59□□□□□ -1.99
SQLE-204ENST00000520493 C8orf17Q9NRJ1 99 aa2.59□□□□□ -1.99
SQLE-204ENST00000520493 LRRC42Q9Y546 428 aa2.59□□□□□ -1.99
SQLE-204ENST00000520493 INSIG2Q9Y5U4 225 aa2.59□□□□□ -1.99
SQLE-204ENST00000520493 TMEM14AQ9Y6G1 99 aa2.59□□□□□ -1.99
SQLE-204ENST00000520493 ARHGAP21Q5T5U3 1957 aa2.59□□□□□ -2
SQLE-204ENST00000520493 RAB3GAP2Q9H2M9 1393 aa2.59□□□□□ -2
SQLE-204ENST00000520493 IGLV4-69A0A075B6H9 119 aa2.58□□□□□ -2
SQLE-204ENST00000520493 LOC389332A0A1B0GUA5 103 aa2.58□□□□□ -2
SQLE-204ENST00000520493 TMEM223A0PJW6 202 aa2.58□□□□□ -2
SQLE-204ENST00000520493 TMEM72A0PK05 275 aa2.58□□□□□ -2
SQLE-204ENST00000520493 CEACAM18A8MTB9 384 aa2.58□□□□□ -2
SQLE-204ENST00000520493 C11orf94C9JXX5 98 aa2.58□□□□□ -2
SQLE-204ENST00000520493 CCRL2O00421 344 aa2.58□□□□□ -2
SQLE-204ENST00000520493 SLC37A4O43826 429 aa2.58□□□□□ -2
SQLE-204ENST00000520493 PLIN3O60664 434 aa2.58□□□□□ -2
SQLE-204ENST00000520493 PDCD6O75340 191 aa2.58□□□□□ -2
SQLE-204ENST00000520493 HLA-DQA1P01909 254 aa2.58□□□□□ -2
SQLE-204ENST00000520493 APOEP02649 317 aa2.58□□□□□ -2
SQLE-204ENST00000520493 IGKV5-2P06315 115 aa2.58□□□□□ -2
SQLE-204ENST00000520493 SERPINA6P08185 405 aa2.58□□□□□ -2
SQLE-204ENST00000520493 SNRPAP09012 282 aaKnown RBP2.58□□□□□ -2
SQLE-204ENST00000520493 C8orf88P0DMB2 117 aa2.58□□□□□ -2
SQLE-204ENST00000520493 COX5BP10606 129 aa2.58□□□□□ -2
SQLE-204ENST00000520493 AKR1C4P17516 323 aa2.58□□□□□ -2
SQLE-204ENST00000520493 CELP19835 753 aa2.58□□□□□ -2
SQLE-204ENST00000520493 HOXA6P31267 233 aa2.58□□□□□ -2
SQLE-204ENST00000520493 CCL23P55773 120 aa2.58□□□□□ -2
SQLE-204ENST00000520493 LRRC26Q2I0M4 334 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms