RNA–Protein interactions for RNA: ENST00000519596.5

PABPC1-211, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-211ENST00000519596 FAAP24Q9BTP7 215 aa2.19□□□□□ -2.06
PABPC1-211ENST00000519596 EFCAB11Q9BUY7 163 aa2.19□□□□□ -2.06
PABPC1-211ENST00000519596 RNF167Q9H6Y7 350 aa2.19□□□□□ -2.06
PABPC1-211ENST00000519596 REEP1Q9H902 201 aa2.19□□□□□ -2.06
PABPC1-211ENST00000519596 MEPEQ9NQ76 525 aaPredicted RBP2.19□□□□□ -2.06
PABPC1-211ENST00000519596 Q9UF83 564 aa2.19□□□□□ -2.06
PABPC1-211ENST00000519596 GNPTGQ9UJJ9 305 aa2.19□□□□□ -2.06
PABPC1-211ENST00000519596 SCP2D1Q9UJQ7 156 aa2.19□□□□□ -2.06
PABPC1-211ENST00000519596 HSPB8Q9UJY1 196 aa2.19□□□□□ -2.06
PABPC1-211ENST00000519596 RAB22AQ9UL26 194 aa2.19□□□□□ -2.06
PABPC1-211ENST00000519596 SLC7A7Q9UM01 511 aa2.19□□□□□ -2.06
PABPC1-211ENST00000519596 VDAC3Q9Y277 283 aa2.19□□□□□ -2.06
PABPC1-211ENST00000519596 POLR1DQ9Y2S0 133 aa2.19□□□□□ -2.06
PABPC1-211ENST00000519596 CARHSP1Q9Y2V2 147 aaKnown RBP2.19□□□□□ -2.06
PABPC1-211ENST00000519596 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.19□□□□□ -2.06
PABPC1-211ENST00000519596 WSB1Q9Y6I7 421 aa2.19□□□□□ -2.06
PABPC1-211ENST00000519596 R4GN57 208 aa2.19□□□□□ -2.06
PABPC1-211ENST00000519596 ZCCHC11Q5TAX3 1644 aaKnown RBP2.19□□□□□ -2.06
PABPC1-211ENST00000519596 CACNA1FO60840 1977 aa2.19□□□□□ -2.06
PABPC1-211ENST00000519596 CNTNAP1P78357 1384 aa2.19□□□□□ -2.06
PABPC1-211ENST00000519596 PALLDQ8WX93 1383 aa2.19□□□□□ -2.06
PABPC1-211ENST00000519596 CCDC18Q5T9S5 1454 aa2.19□□□□□ -2.06
PABPC1-211ENST00000519596 IFT140Q96RY7 1462 aa2.19□□□□□ -2.06
PABPC1-211ENST00000519596 MYO5BQ9ULV0 1848 aa2.19□□□□□ -2.06
PABPC1-211ENST00000519596 MYH3P11055 1940 aa2.19□□□□□ -2.06
PABPC1-211ENST00000519596 ASTN1O14525 1302 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 NEDD4P46934 1319 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 NOS1P29475 1434 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 MIA2Q96PC5 1412 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 A0A0A6YYD4 124 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 IGHV2OR16-5A0A0B4J2B6 119 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 TRBV5-5A0A0J9YX44 114 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 A0A1B0GV50 99 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 FAM240AA0A1B0GVK7 77 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 A0A1W2PRE2 83 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 MEIOCA2RUB1 952 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 TMEM189A5PLL7 270 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 LINC00862A6NCI5 91 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 A6NDN8 102 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 GLTPD2A6NH11 291 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 OR5H1A6NKK0 313 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 SMKR1H3BMG3 65 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 H3BMQ9 156 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 TMEM178BH3BS89 294 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 GYG2O15488 501 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 EDIL3O43854 480 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 RAMP1O60894 148 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 WDR1O75083 606 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 FKBP6O75344 327 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 SPAG7O75391 227 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 GCM2O75603 506 aaPredicted RBP2.18□□□□□ -2.06
PABPC1-211ENST00000519596 LYPD3O95274 346 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 CDS2O95674 445 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 TBX6O95947 436 aaPredicted RBP2.18□□□□□ -2.06
PABPC1-211ENST00000519596 HPRT1P00492 218 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 OAS1P00973 400 aaKnown RBP2.18□□□□□ -2.06
PABPC1-211ENST00000519596 OXTP01178 125 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 IGHV2-5P01817 119 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 ATP1B1P05026 303 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 HPNP05981 417 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 OR5G3P0C626 314 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 LINC00271P0C7V0 271 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 FAM157CP0CG43 387 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 UBBP0CG47 229 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 ACP2P11117 423 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 HSD17B1P14061 328 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 GPR183P32249 361 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 CDKN2BP42772 138 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 HNRNPA3P51991 378 aaKnown RBP2.18□□□□□ -2.06
PABPC1-211ENST00000519596 SEC61BP60468 96 aaKnown RBP2.18□□□□□ -2.06
PABPC1-211ENST00000519596 PFN3P60673 137 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 RPL27P61353 136 aaKnown RBP2.18□□□□□ -2.06
PABPC1-211ENST00000519596 SNRPD1P62314 119 aaKnown RBP2.18□□□□□ -2.06
PABPC1-211ENST00000519596 SELENOWP63302 87 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 CDK5Q00535 292 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 ECH1Q13011 328 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 CLINT1Q14677 625 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 FCN2Q15485 313 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 ACOT6Q3I5F7 207 aaPredicted RBP2.18□□□□□ -2.06
PABPC1-211ENST00000519596 FAM162BQ5T6X4 162 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 REP15Q6BDI9 236 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 GLYATQ6IB77 296 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 OR10K2Q6IF99 312 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 SCIMPQ6UWF3 145 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 UNQ9370/PRO34162Q6UXP9 181 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 C12orf54Q6X4T0 127 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 ADAMTSL5Q6ZMM2 481 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 ZNF730Q6ZMV8 503 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 FOXL2NBQ6ZUU3 175 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 PRSS41Q7RTY9 318 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 PIWIL4Q7Z3Z4 852 aaKnown RBP2.18□□□□□ -2.06
PABPC1-211ENST00000519596 DEFB128Q7Z7B8 93 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 TMEM150AQ86TG1 271 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 ZNF567Q8N184 647 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 C1orf158Q8N1D5 194 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 MUC15Q8N387 334 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 C12orf45Q8N5I9 185 aaPredicted RBP2.18□□□□□ -2.06
PABPC1-211ENST00000519596 ZNF557Q8N988 423 aaPredicted RBP2.18□□□□□ -2.06
PABPC1-211ENST00000519596 ZNF383Q8NA42 475 aa2.18□□□□□ -2.06
PABPC1-211ENST00000519596 TSTD1Q8NFU3 115 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms