RNA–Protein interactions for RNA: ENST00000519552.1

DCTN4-208, Transcript of dynactin subunit 4, humanhuman

TSL 4

Gene DCTN4, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCTN4-208ENST00000519552 IBTKQ9P2D0 1353 aaPredicted RBP3.21□□□□□ -1.9
DCTN4-208ENST00000519552 SETD1AO15047 1707 aaKnown RBP3.21□□□□□ -1.9
DCTN4-208ENST00000519552 ADGRB1O14514 1584 aa3.21□□□□□ -1.9
DCTN4-208ENST00000519552 CDC42BPGQ6DT37 1551 aa3.21□□□□□ -1.9
DCTN4-208ENST00000519552 ADGRL3Q9HAR2 1447 aa3.2□□□□□ -1.9
DCTN4-208ENST00000519552 LRRC7Q96NW7 1537 aa3.2□□□□□ -1.9
DCTN4-208ENST00000519552 LTBP4Q8N2S1 1624 aa3.2□□□□□ -1.9
DCTN4-208ENST00000519552 A0A0G2JMP0 313 aa3.2□□□□□ -1.9
DCTN4-208ENST00000519552 A0A0X1KG70 313 aa3.2□□□□□ -1.9
DCTN4-208ENST00000519552 NDUFS5O43920 106 aa3.2□□□□□ -1.9
DCTN4-208ENST00000519552 IGKV1D-16P01601 117 aa3.2□□□□□ -1.9
DCTN4-208ENST00000519552 STAG3L2P0CL84 134 aa3.2□□□□□ -1.9
DCTN4-208ENST00000519552 MSNP26038 577 aaKnown RBP3.2□□□□□ -1.9
DCTN4-208ENST00000519552 TGM4P49221 684 aa3.2□□□□□ -1.9
DCTN4-208ENST00000519552 FBXL19-AS1Q494R0 122 aa3.2□□□□□ -1.9
DCTN4-208ENST00000519552 LCE1CQ5T751 118 aa3.2□□□□□ -1.9
DCTN4-208ENST00000519552 FAM27D1Q5T7N8 215 aa3.2□□□□□ -1.9
DCTN4-208ENST00000519552 LCE1BQ5T7P3 118 aa3.2□□□□□ -1.9
DCTN4-208ENST00000519552 DUPD1Q68J44 220 aa3.2□□□□□ -1.9
DCTN4-208ENST00000519552 FAM131AQ6UXB0 335 aa3.2□□□□□ -1.9
DCTN4-208ENST00000519552 RNF10Q8N5U6 811 aaKnown RBP3.2□□□□□ -1.9
DCTN4-208ENST00000519552 OTUD6BQ8N6M0 293 aa3.2□□□□□ -1.9
DCTN4-208ENST00000519552 LINC00469Q8N7U9 141 aa3.2□□□□□ -1.9
DCTN4-208ENST00000519552 SLC26A10Q8NG04 563 aa3.2□□□□□ -1.9
DCTN4-208ENST00000519552 NDNFQ8TB73 568 aa3.2□□□□□ -1.9
DCTN4-208ENST00000519552 CACNG8Q8WXS5 425 aa3.2□□□□□ -1.9
DCTN4-208ENST00000519552 FAM210AQ96ND0 272 aa3.2□□□□□ -1.9
DCTN4-208ENST00000519552 TSNAXQ99598 290 aaKnown RBP3.2□□□□□ -1.9
DCTN4-208ENST00000519552 DDIT4Q9NX09 232 aa3.2□□□□□ -1.9
DCTN4-208ENST00000519552 TMEM131Q92545 1883 aa3.2□□□□□ -1.9
DCTN4-208ENST00000519552 SMG6Q86US8 1419 aaKnown RBP3.19□□□□□ -1.9
DCTN4-208ENST00000519552 ITSN1Q15811 1721 aa3.19□□□□□ -1.9
DCTN4-208ENST00000519552 A0A0J9YYE9 177 aa3.19□□□□□ -1.9
DCTN4-208ENST00000519552 TRBC1P01850 177 aa3.19□□□□□ -1.9
DCTN4-208ENST00000519552 RPS11P62280 158 aaKnown RBP eCLIP3.19□□□□□ -1.9
DCTN4-208ENST00000519552 IFFO1Q0D2I5 559 aa3.19□□□□□ -1.9
DCTN4-208ENST00000519552 TRDNQ13061 729 aa3.19□□□□□ -1.9
DCTN4-208ENST00000519552 LINC00303Q3SY05 128 aa3.19□□□□□ -1.9
DCTN4-208ENST00000519552 FAM104BQ5XKR9 115 aa3.19□□□□□ -1.9
DCTN4-208ENST00000519552 SETD3Q86TU7 594 aaPredicted RBP3.19□□□□□ -1.9
DCTN4-208ENST00000519552 SGPP2Q8IWX5 399 aa3.19□□□□□ -1.9
DCTN4-208ENST00000519552 ZFAND1Q8TCF1 268 aa3.19□□□□□ -1.9
DCTN4-208ENST00000519552 FAM131CQ96AQ9 280 aa3.19□□□□□ -1.9
DCTN4-208ENST00000519552 RNF170Q96K19 258 aa3.19□□□□□ -1.9
DCTN4-208ENST00000519552 SEC22CQ9BRL7 303 aa3.19□□□□□ -1.9
DCTN4-208ENST00000519552 GAL3ST2Q9H3Q3 398 aa3.19□□□□□ -1.9
DCTN4-208ENST00000519552 LZTFL1Q9NQ48 299 aa3.19□□□□□ -1.9
DCTN4-208ENST00000519552 TFR2Q9UP52 801 aa3.19□□□□□ -1.9
DCTN4-208ENST00000519552 ORC6Q9Y5N6 252 aa3.19□□□□□ -1.9
DCTN4-208ENST00000519552 TMEM94Q12767 1356 aa3.19□□□□□ -1.9
DCTN4-208ENST00000519552 KIF1AQ12756 1690 aa3.19□□□□□ -1.9
DCTN4-208ENST00000519552 TULP4Q9NRJ4 1543 aa3.19□□□□□ -1.9
DCTN4-208ENST00000519552 ELP1O95163 1332 aa3.19□□□□□ -1.9
DCTN4-208ENST00000519552 TTC21AQ8NDW8 1320 aa3.19□□□□□ -1.9
DCTN4-208ENST00000519552 ARHGEF10O15013 1369 aa3.18□□□□□ -1.9
DCTN4-208ENST00000519552 KIF24Q5T7B8 1368 aa3.18□□□□□ -1.9
DCTN4-208ENST00000519552 KTN1Q86UP2 1357 aaKnown RBP3.18□□□□□ -1.9
DCTN4-208ENST00000519552 FAM240AA0A1B0GVK7 77 aa3.18□□□□□ -1.9
DCTN4-208ENST00000519552 ALOX12BO75342 701 aa3.18□□□□□ -1.9
DCTN4-208ENST00000519552 IGHV1-46P01743 117 aa3.18□□□□□ -1.9
DCTN4-208ENST00000519552 IGLV7-43P04211 117 aa3.18□□□□□ -1.9
DCTN4-208ENST00000519552 OR5AL1P0C617 328 aa3.18□□□□□ -1.9
DCTN4-208ENST00000519552 CCDC172P0C7W6 258 aa3.18□□□□□ -1.9
DCTN4-208ENST00000519552 HOXB8P17481 243 aaPredicted RBP3.18□□□□□ -1.9
DCTN4-208ENST00000519552 COL8A2P25067 703 aa3.18□□□□□ -1.9
DCTN4-208ENST00000519552 MPIP34949 423 aa3.18□□□□□ -1.9
DCTN4-208ENST00000519552 ATP5J2P56134 94 aa3.18□□□□□ -1.9
DCTN4-208ENST00000519552 LAMTOR4Q0VGL1 99 aa3.18□□□□□ -1.9
DCTN4-208ENST00000519552 MAPRE2Q15555 327 aa3.18□□□□□ -1.9
DCTN4-208ENST00000519552 CDNFQ49AH0 187 aa3.18□□□□□ -1.9
DCTN4-208ENST00000519552 TTC32Q5I0X7 151 aa3.18□□□□□ -1.9
DCTN4-208ENST00000519552 THOC7Q6I9Y2 204 aaKnown RBP3.18□□□□□ -1.9
DCTN4-208ENST00000519552 PRNTQ86SH4 94 aa3.18□□□□□ -1.9
DCTN4-208ENST00000519552 CALHM3Q86XJ0 350 aa3.18□□□□□ -1.9
DCTN4-208ENST00000519552 FAM57AQ8TBR7 257 aa3.18□□□□□ -1.9
DCTN4-208ENST00000519552 TNFRSF14Q92956 283 aa3.18□□□□□ -1.9
DCTN4-208ENST00000519552 DERL3Q96Q80 235 aa3.18□□□□□ -1.9
DCTN4-208ENST00000519552 SPACA5Q96QH8 159 aa3.18□□□□□ -1.9
DCTN4-208ENST00000519552 PAIP2Q9BPZ3 127 aaKnown RBP3.18□□□□□ -1.9
DCTN4-208ENST00000519552 PDCD1LG2Q9BQ51 273 aa3.18□□□□□ -1.9
DCTN4-208ENST00000519552 SHANK2-AS3Q9BTD1 123 aa3.18□□□□□ -1.9
DCTN4-208ENST00000519552 MAP1LC3CQ9BXW4 147 aa3.18□□□□□ -1.9
DCTN4-208ENST00000519552 PORCNQ9H237 461 aa3.18□□□□□ -1.9
DCTN4-208ENST00000519552 FLVCR2Q9UPI3 526 aa3.18□□□□□ -1.9
DCTN4-208ENST00000519552 ARHGEF28Q8N1W1 1705 aaKnown RBP3.18□□□□□ -1.9
DCTN4-208ENST00000519552 SHROOM3Q8TF72 1996 aa3.18□□□□□ -1.9
DCTN4-208ENST00000519552 ATP7BP35670 1465 aa3.17□□□□□ -1.9
DCTN4-208ENST00000519552 POLR3AO14802 1390 aaPredicted RBP3.17□□□□□ -1.9
DCTN4-208ENST00000519552 SIPA1L2Q9P2F8 1722 aaPredicted RBP3.17□□□□□ -1.9
DCTN4-208ENST00000519552 H7C2Y5 167 aa3.17□□□□□ -1.9
DCTN4-208ENST00000519552 K7EN84 100 aa3.17□□□□□ -1.9
DCTN4-208ENST00000519552 M0R1B8 84 aa3.17□□□□□ -1.9
DCTN4-208ENST00000519552 HLA-GP17693 338 aa3.17□□□□□ -1.9
DCTN4-208ENST00000519552 TAS2R60P59551 318 aa3.17□□□□□ -1.9
DCTN4-208ENST00000519552 FLI1Q01543 452 aaPredicted RBP3.17□□□□□ -1.9
DCTN4-208ENST00000519552 DYNC1I2Q13409 638 aaKnown RBP3.17□□□□□ -1.9
DCTN4-208ENST00000519552 PMVKQ15126 192 aa3.17□□□□□ -1.9
DCTN4-208ENST00000519552 TAL2Q16559 108 aa3.17□□□□□ -1.9
DCTN4-208ENST00000519552 HNRNPA1L2Q32P51 320 aaKnown RBP3.17□□□□□ -1.9
DCTN4-208ENST00000519552 HSP90AA4PQ58FG1 418 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms