RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 C11orf42Q8N5U0 333 aa7.67□□□□□ -1.18
HDAC3-215ENST00000519474 OR2G2Q8NGZ5 317 aa7.67□□□□□ -1.18
HDAC3-215ENST00000519474 GATAD2BQ8WXI9 593 aa7.67□□□□□ -1.18
HDAC3-215ENST00000519474 H1FXQ92522 213 aaKnown RBP7.67□□□□□ -1.18
HDAC3-215ENST00000519474 MYDGFQ969H8 173 aa7.67□□□□□ -1.18
HDAC3-215ENST00000519474 SLC25A28Q96A46 364 aa7.67□□□□□ -1.18
HDAC3-215ENST00000519474 RNFT2Q96EX2 444 aa7.67□□□□□ -1.18
HDAC3-215ENST00000519474 ZNF649Q9BS31 505 aa7.67□□□□□ -1.18
HDAC3-215ENST00000519474 ADI1Q9BV57 179 aa7.67□□□□□ -1.18
HDAC3-215ENST00000519474 ZNF747Q9BV97 191 aa7.67□□□□□ -1.18
HDAC3-215ENST00000519474 HES4Q9HCC6 221 aa7.67□□□□□ -1.18
HDAC3-215ENST00000519474 FAM118AQ9NWS6 357 aa7.67□□□□□ -1.18
HDAC3-215ENST00000519474 IMPAD1Q9NX62 359 aa7.67□□□□□ -1.18
HDAC3-215ENST00000519474 TAS2R3Q9NYW6 316 aa7.67□□□□□ -1.18
HDAC3-215ENST00000519474 MTCH1Q9NZJ7 389 aa7.67□□□□□ -1.18
HDAC3-215ENST00000519474 ORC6Q9Y5N6 252 aa7.67□□□□□ -1.18
HDAC3-215ENST00000519474 IGKV1-9A0A0C4DH69 117 aa7.66□□□□□ -1.18
HDAC3-215ENST00000519474 A0A0U1RQK1 487 aa7.66□□□□□ -1.18
HDAC3-215ENST00000519474 LOC100130705A0A1B0GUX0 176 aa7.66□□□□□ -1.18
HDAC3-215ENST00000519474 A0A1B0GVI7 797 aa7.66□□□□□ -1.18
HDAC3-215ENST00000519474 FAM230AA0A1W2PPH8 454 aa7.66□□□□□ -1.18
HDAC3-215ENST00000519474 DAPL1A0PJW8 107 aa7.66□□□□□ -1.18
HDAC3-215ENST00000519474 FUOMA2VDF0 154 aa7.66□□□□□ -1.18
HDAC3-215ENST00000519474 F8VVB4 439 aa7.66□□□□□ -1.18
HDAC3-215ENST00000519474 F8VWA3 439 aa7.66□□□□□ -1.18
HDAC3-215ENST00000519474 RNASEK-C17orf49H0YIS7 233 aa7.66□□□□□ -1.18
HDAC3-215ENST00000519474 J3QT63 122 aa7.66□□□□□ -1.18
HDAC3-215ENST00000519474 MELTFP08582 738 aa7.66□□□□□ -1.18
HDAC3-215ENST00000519474 FUT6P51993 359 aa7.66□□□□□ -1.18
HDAC3-215ENST00000519474 AP2S1P53680 142 aaPredicted RBP7.66□□□□□ -1.18
HDAC3-215ENST00000519474 NANOS3P60323 173 aaKnown RBP7.66□□□□□ -1.18
HDAC3-215ENST00000519474 TMEM200BQ69YZ2 307 aa7.66□□□□□ -1.18
HDAC3-215ENST00000519474 HCP5Q6MZN7 132 aa7.66□□□□□ -1.18
HDAC3-215ENST00000519474 LHFPL3Q86UP9 236 aa7.66□□□□□ -1.18
HDAC3-215ENST00000519474 ENTHD1Q8IYW4 607 aa7.66□□□□□ -1.18
HDAC3-215ENST00000519474 OR8H3Q8N146 312 aa7.66□□□□□ -1.18
HDAC3-215ENST00000519474 BATF2Q8N1L9 274 aa7.66□□□□□ -1.18
HDAC3-215ENST00000519474 PQLC1Q8N2U9 271 aa7.66□□□□□ -1.18
HDAC3-215ENST00000519474 ACBD7Q8N6N7 88 aa7.66□□□□□ -1.18
HDAC3-215ENST00000519474 KIR3DL3Q8N743 410 aa7.66□□□□□ -1.18
HDAC3-215ENST00000519474 CCDC54Q8NEL0 328 aa7.66□□□□□ -1.18
HDAC3-215ENST00000519474 TRMT10AQ8TBZ6 339 aaKnown RBP7.66□□□□□ -1.18
HDAC3-215ENST00000519474 FGGYQ96C11 551 aa7.66□□□□□ -1.18
HDAC3-215ENST00000519474 LGALS12Q96DT0 336 aa7.66□□□□□ -1.18
HDAC3-215ENST00000519474 ADAT3Q96EY9 351 aaPredicted RBP7.66□□□□□ -1.18
HDAC3-215ENST00000519474 NRIP2Q9BQI9 281 aa7.66□□□□□ -1.18
HDAC3-215ENST00000519474 ZMAT3Q9HA38 289 aaKnown RBP7.66□□□□□ -1.18
HDAC3-215ENST00000519474 ELL3Q9HB65 397 aaPredicted RBP7.66□□□□□ -1.18
HDAC3-215ENST00000519474 AMBNQ9NP70 447 aa7.66□□□□□ -1.18
HDAC3-215ENST00000519474 SIRT7Q9NRC8 400 aa7.66□□□□□ -1.18
HDAC3-215ENST00000519474 TNFRSF19Q9NS68 423 aa7.66□□□□□ -1.18
HDAC3-215ENST00000519474 MRPS18AQ9NVS2 196 aaKnown RBP7.66□□□□□ -1.18
HDAC3-215ENST00000519474 ONECUT1Q9UBC0 465 aa7.66□□□□□ -1.18
HDAC3-215ENST00000519474 GNG8Q9UK08 70 aa7.66□□□□□ -1.18
HDAC3-215ENST00000519474 SPATA2Q9UM82 520 aa7.66□□□□□ -1.18
HDAC3-215ENST00000519474 SLC7A11Q9UPY5 501 aa7.66□□□□□ -1.18
HDAC3-215ENST00000519474 MYRFQ9Y2G1 1151 aa7.66□□□□□ -1.18
HDAC3-215ENST00000519474 PCDHGB1Q9Y5G3 927 aa7.66□□□□□ -1.18
HDAC3-215ENST00000519474 GMPPBQ9Y5P6 360 aa7.66□□□□□ -1.18
HDAC3-215ENST00000519474 FAM181BA6NEQ2 426 aa7.65□□□□□ -1.18
HDAC3-215ENST00000519474 ANKRD61A6NGH8 418 aa7.65□□□□□ -1.18
HDAC3-215ENST00000519474 NKX6-3A6NJ46 265 aa7.65□□□□□ -1.18
HDAC3-215ENST00000519474 H3BUI4 141 aa7.65□□□□□ -1.18
HDAC3-215ENST00000519474 J3QLW9 94 aa7.65□□□□□ -1.18
HDAC3-215ENST00000519474 SLC16A6O15403 523 aa7.65□□□□□ -1.18
HDAC3-215ENST00000519474 ISG15P05161 165 aa7.65□□□□□ -1.18
HDAC3-215ENST00000519474 ZNF19P17023 458 aa7.65□□□□□ -1.18
HDAC3-215ENST00000519474 OMGP23515 440 aa7.65□□□□□ -1.18
HDAC3-215ENST00000519474 IER3P46695 156 aa7.65□□□□□ -1.18
HDAC3-215ENST00000519474 CEBPDP49716 269 aaPredicted RBP7.65□□□□□ -1.18
HDAC3-215ENST00000519474 BCAP31P51572 246 aa7.65□□□□□ -1.18
HDAC3-215ENST00000519474 CCR9P51686 369 aa7.65□□□□□ -1.18
HDAC3-215ENST00000519474 ERVFRD-1P60508 538 aa7.65□□□□□ -1.18
HDAC3-215ENST00000519474 IL24Q13007 206 aa7.65□□□□□ -1.18
HDAC3-215ENST00000519474 GALEQ14376 348 aa7.65□□□□□ -1.18
HDAC3-215ENST00000519474 TMEM244Q5VVB8 128 aa7.65□□□□□ -1.18
HDAC3-215ENST00000519474 CMTM4Q8IZR5 234 aa7.65□□□□□ -1.18
HDAC3-215ENST00000519474 PRR18Q8N4B5 295 aa7.65□□□□□ -1.18
HDAC3-215ENST00000519474 ZNF561Q8N587 486 aa7.65□□□□□ -1.18
HDAC3-215ENST00000519474 NPRL2Q8WTW4 380 aa7.65□□□□□ -1.18
HDAC3-215ENST00000519474 C10orf35Q96D05 121 aa7.65□□□□□ -1.18
HDAC3-215ENST00000519474 PELI1Q96FA3 418 aa7.65□□□□□ -1.18
HDAC3-215ENST00000519474 CHIAQ9BZP6 476 aa7.65□□□□□ -1.18
HDAC3-215ENST00000519474 PKIBQ9C010 78 aa7.65□□□□□ -1.18
HDAC3-215ENST00000519474 ISG20L2Q9H9L3 353 aaKnown RBP7.65□□□□□ -1.18
HDAC3-215ENST00000519474 UNKLQ9H9P5 680 aaKnown RBP7.65□□□□□ -1.18
HDAC3-215ENST00000519474 A0A1W2PRD5 423 aa7.64□□□□□ -1.19
HDAC3-215ENST00000519474 A0A1W2PRF3 423 aa7.64□□□□□ -1.19
HDAC3-215ENST00000519474 A0A1W2PRM7 423 aa7.64□□□□□ -1.19
HDAC3-215ENST00000519474 OR4C45A6NMZ5 311 aa7.64□□□□□ -1.19
HDAC3-215ENST00000519474 E9PI62 339 aa7.64□□□□□ -1.19
HDAC3-215ENST00000519474 M0R1W7 72 aa7.64□□□□□ -1.19
HDAC3-215ENST00000519474 NXPH2O95156 264 aa7.64□□□□□ -1.19
HDAC3-215ENST00000519474 SERPINA3P01011 423 aa7.64□□□□□ -1.19
HDAC3-215ENST00000519474 TK1P04183 234 aa7.64□□□□□ -1.19
HDAC3-215ENST00000519474 DBTP11182 482 aaKnown RBP7.64□□□□□ -1.19
HDAC3-215ENST00000519474 ATF1P18846 271 aa7.64□□□□□ -1.19
HDAC3-215ENST00000519474 MDKP21741 143 aaPredicted RBP7.64□□□□□ -1.19
HDAC3-215ENST00000519474 UBE2E1P51965 193 aa7.64□□□□□ -1.19
HDAC3-215ENST00000519474 RELBQ01201 579 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms