RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, human

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-208	ENST00000518877	LINC00596	Q86U02	117 aa		0.45	□□□□□ -2.34
PCM1-208	ENST00000518877	NAA40	Q86UY6	237 aa		0.45	□□□□□ -2.34
PCM1-208	ENST00000518877	CMTM8	Q8IZV2	173 aa		0.45	□□□□□ -2.34
PCM1-208	ENST00000518877	CCNYL1	Q8N7R7	359 aa		0.45	□□□□□ -2.34
PCM1-208	ENST00000518877	ZNF738	Q8NE65	137 aa		0.45	□□□□□ -2.34
PCM1-208	ENST00000518877	OR2M3	Q8NG83	312 aa		0.45	□□□□□ -2.34
PCM1-208	ENST00000518877	MFSD8	Q8NHS3	518 aa		0.45	□□□□□ -2.34
PCM1-208	ENST00000518877	TSEN15	Q8WW01	171 aa	Known RBP	0.45	□□□□□ -2.34
PCM1-208	ENST00000518877	OR8D1	Q8WZ84	308 aa		0.45	□□□□□ -2.34
PCM1-208	ENST00000518877	PLIN2	Q99541	437 aa		0.45	□□□□□ -2.34
PCM1-208	ENST00000518877	TMED9	Q9BVK6	235 aa		0.45	□□□□□ -2.34
PCM1-208	ENST00000518877	AICDA	Q9GZX7	198 aa		0.45	□□□□□ -2.34
PCM1-208	ENST00000518877	OR2AG1	Q9H205	316 aa		0.45	□□□□□ -2.34
PCM1-208	ENST00000518877	LRRC19	Q9H756	370 aa		0.45	□□□□□ -2.34
PCM1-208	ENST00000518877	RHOF	Q9HBH0	211 aa		0.45	□□□□□ -2.34
PCM1-208	ENST00000518877	TUBG2	Q9NRH3	451 aa		0.45	□□□□□ -2.34
PCM1-208	ENST00000518877	RBM22	Q9NW64	420 aa	Known RBP eCLIP	0.45	□□□□□ -2.34
PCM1-208	ENST00000518877	INSIG2	Q9Y5U4	225 aa		0.45	□□□□□ -2.34
PCM1-208	ENST00000518877	ZNF780B	Q9Y6R6	833 aa		0.45	□□□□□ -2.34
PCM1-208	ENST00000518877	FN1	P02751	2386 aa	Known RBP	0.45	□□□□□ -2.34
PCM1-208	ENST00000518877	NCKAP5	O14513	1909 aa		0.44	□□□□□ -2.34
PCM1-208	ENST00000518877	ZNF469	Q96JG9	3925 aa	Predicted RBP	0.44	□□□□□ -2.34
PCM1-208	ENST00000518877	TRAV25	A0A0B4J276	109 aa		0.44	□□□□□ -2.34
PCM1-208	ENST00000518877	KNCN	A6PVL3	124 aa		0.44	□□□□□ -2.34
PCM1-208	ENST00000518877	LY6L	H3BQJ8	138 aa		0.44	□□□□□ -2.34
PCM1-208	ENST00000518877	LECT2	O14960	151 aa		0.44	□□□□□ -2.34
PCM1-208	ENST00000518877	GYG2	O15488	501 aa		0.44	□□□□□ -2.34
PCM1-208	ENST00000518877	CRTAP	O75718	401 aa	Predicted RBP	0.44	□□□□□ -2.34
PCM1-208	ENST00000518877	KLK1	P06870	262 aa		0.44	□□□□□ -2.34
PCM1-208	ENST00000518877	PSMB9	P28065	219 aa		0.44	□□□□□ -2.34
PCM1-208	ENST00000518877	GABRR2	P28476	465 aa		0.44	□□□□□ -2.34
PCM1-208	ENST00000518877	S100A2	P29034	98 aa		0.44	□□□□□ -2.34
PCM1-208	ENST00000518877	HMGN5	P82970	282 aa	Known RBP	0.44	□□□□□ -2.34
PCM1-208	ENST00000518877	CASP8	Q14790	479 aa		0.44	□□□□□ -2.34
PCM1-208	ENST00000518877	RCN1	Q15293	331 aa		0.44	□□□□□ -2.34
PCM1-208	ENST00000518877	CDNF	Q49AH0	187 aa		0.44	□□□□□ -2.34
PCM1-208	ENST00000518877	LAIR2	Q6ISS4	152 aa		0.44	□□□□□ -2.34
PCM1-208	ENST00000518877	ZNF773	Q6PK81	442 aa		0.44	□□□□□ -2.34
PCM1-208	ENST00000518877	SETD3	Q86TU7	594 aa	Predicted RBP	0.44	□□□□□ -2.34
PCM1-208	ENST00000518877	BBS5	Q8N3I7	341 aa		0.44	□□□□□ -2.34
PCM1-208	ENST00000518877	INO80E	Q8NBZ0	244 aa	Predicted RBP	0.44	□□□□□ -2.34
PCM1-208	ENST00000518877	OR4K13	Q8NH42	304 aa		0.44	□□□□□ -2.34
PCM1-208	ENST00000518877	UBA3	Q8TBC4	463 aa		0.44	□□□□□ -2.34
PCM1-208	ENST00000518877	CXCL16	Q9H2A7	254 aa		0.44	□□□□□ -2.34
PCM1-208	ENST00000518877	TRPM3	Q9HCF6	1732 aa	Predicted RBP	0.44	□□□□□ -2.34
PCM1-208	ENST00000518877	MUC5B	Q9HC84	5762 aa	Predicted RBP	0.43	□□□□□ -2.34
PCM1-208	ENST00000518877	ARHGAP32	A7KAX9	2087 aa		0.43	□□□□□ -2.34
PCM1-208	ENST00000518877	RNF113A	O15541	343 aa	Known RBP	0.43	□□□□□ -2.34
PCM1-208	ENST00000518877	HLA-A	P01891	365 aa	Known RBP	0.43	□□□□□ -2.34
PCM1-208	ENST00000518877	LYNX1	P0DP58	116 aa		0.43	□□□□□ -2.34
PCM1-208	ENST00000518877	GTF2F2	P13984	249 aa		0.43	□□□□□ -2.34
PCM1-208	ENST00000518877	MAGEA6	P43360	314 aa		0.43	□□□□□ -2.34
PCM1-208	ENST00000518877	PRB3	Q04118	309 aa	Predicted RBP	0.43	□□□□□ -2.34
PCM1-208	ENST00000518877	DNAJC3	Q13217	504 aa		0.43	□□□□□ -2.34
PCM1-208	ENST00000518877	BEX5	Q5H9J7	111 aa		0.43	□□□□□ -2.34
PCM1-208	ENST00000518877		Q6ZRN7	208 aa	Predicted RBP	0.43	□□□□□ -2.34
PCM1-208	ENST00000518877	OR8K1	Q8NGG5	319 aa		0.43	□□□□□ -2.34
PCM1-208	ENST00000518877	OR8A1	Q8NGG7	326 aa		0.43	□□□□□ -2.34
PCM1-208	ENST00000518877	OR10Z1	Q8NGY1	313 aa		0.43	□□□□□ -2.34
PCM1-208	ENST00000518877	METTL26	Q96S19	204 aa		0.43	□□□□□ -2.34
PCM1-208	ENST00000518877	B9D2	Q9BPU9	175 aa		0.43	□□□□□ -2.34
PCM1-208	ENST00000518877	ZNF251	Q9BRH9	671 aa		0.43	□□□□□ -2.34
PCM1-208	ENST00000518877	SHCBP1L	Q9BZQ2	653 aa		0.43	□□□□□ -2.34
PCM1-208	ENST00000518877	AUNIP	Q9H7T9	357 aa		0.43	□□□□□ -2.34
PCM1-208	ENST00000518877	ZC4H2	Q9NQZ6	224 aa		0.43	□□□□□ -2.34
PCM1-208	ENST00000518877	ADA2	Q9NZK5	511 aa		0.43	□□□□□ -2.34
PCM1-208	ENST00000518877	NAGK	Q9UJ70	344 aa		0.43	□□□□□ -2.34
PCM1-208	ENST00000518877	TFR2	Q9UP52	801 aa		0.43	□□□□□ -2.34
PCM1-208	ENST00000518877	SLC7A11	Q9UPY5	501 aa		0.43	□□□□□ -2.34
PCM1-208	ENST00000518877	URGCP-MRPS24	S4R325	110 aa		0.43	□□□□□ -2.34
PCM1-208	ENST00000518877	TRBV24-1	A0A075B6N3	115 aa		0.42	□□□□□ -2.34
PCM1-208	ENST00000518877	FAM240A	A0A1B0GVK7	77 aa		0.42	□□□□□ -2.34
PCM1-208	ENST00000518877	CTAGE15	A4D2H0	777 aa		0.42	□□□□□ -2.34
PCM1-208	ENST00000518877		F5H5T6	163 aa		0.42	□□□□□ -2.34
PCM1-208	ENST00000518877		H3BRN7	92 aa		0.42	□□□□□ -2.34
PCM1-208	ENST00000518877	COX7A2P2	O60397	106 aa		0.42	□□□□□ -2.34
PCM1-208	ENST00000518877	RAB36	O95755	333 aa		0.42	□□□□□ -2.34
PCM1-208	ENST00000518877	PDYN	P01213	254 aa		0.42	□□□□□ -2.34
PCM1-208	ENST00000518877	OR12D1	P0DN82	309 aa		0.42	□□□□□ -2.34
PCM1-208	ENST00000518877	CNTFR	P26992	372 aa		0.42	□□□□□ -2.34
PCM1-208	ENST00000518877	GABRA4	P48169	554 aa		0.42	□□□□□ -2.34
PCM1-208	ENST00000518877	CLDN18	P56856	261 aa		0.42	□□□□□ -2.34
PCM1-208	ENST00000518877	TMEM176B	Q3YBM2	270 aa	Predicted RBP	0.42	□□□□□ -2.34
PCM1-208	ENST00000518877	TPRG1L	Q5T0D9	272 aa		0.42	□□□□□ -2.34
PCM1-208	ENST00000518877	TMEM215	Q68D42	235 aa		0.42	□□□□□ -2.34
PCM1-208	ENST00000518877	NIPAL1	Q6NVV3	410 aa		0.42	□□□□□ -2.34
PCM1-208	ENST00000518877	C16orf87	Q6PH81	154 aa		0.42	□□□□□ -2.34
PCM1-208	ENST00000518877	ZNF767P	Q75MW2	155 aa		0.42	□□□□□ -2.34
PCM1-208	ENST00000518877	CTAGE6	Q86UF2	777 aa		0.42	□□□□□ -2.34
PCM1-208	ENST00000518877	KATNAL2	Q8IYT4	538 aa		0.42	□□□□□ -2.34
PCM1-208	ENST00000518877	NDNF	Q8TB73	568 aa		0.42	□□□□□ -2.34
PCM1-208	ENST00000518877	GPR119	Q8TDV5	335 aa		0.42	□□□□□ -2.34
PCM1-208	ENST00000518877	CACNG8	Q8WXS5	425 aa		0.42	□□□□□ -2.34
PCM1-208	ENST00000518877	TFG	Q92734	400 aa	Predicted RBP	0.42	□□□□□ -2.34
PCM1-208	ENST00000518877	NAT6	Q93015	286 aa		0.42	□□□□□ -2.34
PCM1-208	ENST00000518877	PYURF	Q96I23	114 aa		0.42	□□□□□ -2.34
PCM1-208	ENST00000518877	QKI	Q96PU8	341 aa	Known RBP eCLIP	0.42	□□□□□ -2.34	1e-13	■■■■□ 20.7
PCM1-208	ENST00000518877	POMK	Q9H5K3	350 aa		0.42	□□□□□ -2.34
PCM1-208	ENST00000518877	C8orf33	Q9H7E9	229 aa	Predicted RBP	0.42	□□□□□ -2.34
PCM1-208	ENST00000518877	SLC23A2	Q9UGH3	650 aa		0.42	□□□□□ -2.34

Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms