RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 PTGFRP43088 359 aa9.18□□□□□ -0.94
SCARNA20-201ENST00000516768 COL10A1Q03692 680 aa9.18□□□□□ -0.94
SCARNA20-201ENST00000516768 PDCD1Q15116 288 aa9.18□□□□□ -0.94
SCARNA20-201ENST00000516768 SPIN3Q5JUX0 258 aa9.18□□□□□ -0.94
SCARNA20-201ENST00000516768 TMEM200BQ69YZ2 307 aa9.18□□□□□ -0.94
SCARNA20-201ENST00000516768 SATL1Q86VE3 508 aa9.18□□□□□ -0.94
SCARNA20-201ENST00000516768 BCL6BQ8N143 479 aaPredicted RBP9.18□□□□□ -0.94
SCARNA20-201ENST00000516768 MS4A15Q8N5U1 240 aa9.18□□□□□ -0.94
SCARNA20-201ENST00000516768 KIR3DL3Q8N743 410 aa9.18□□□□□ -0.94
SCARNA20-201ENST00000516768 Q8N7P7 452 aa9.18□□□□□ -0.94
SCARNA20-201ENST00000516768 Q8NFD4 153 aa9.18□□□□□ -0.94
SCARNA20-201ENST00000516768 PXT1Q8NFP0 134 aa9.18□□□□□ -0.94
SCARNA20-201ENST00000516768 OR5D18Q8NGL1 313 aa9.18□□□□□ -0.94
SCARNA20-201ENST00000516768 TBC1D15Q8TC07 691 aa9.18□□□□□ -0.94
SCARNA20-201ENST00000516768 C22orf15Q8WYQ4 148 aa9.18□□□□□ -0.94
SCARNA20-201ENST00000516768 EMG1Q92979 244 aaKnown RBP9.18□□□□□ -0.94
SCARNA20-201ENST00000516768 ORAI1Q96D31 301 aa9.18□□□□□ -0.94
SCARNA20-201ENST00000516768 CPNE2Q96FN4 548 aaPredicted RBP9.18□□□□□ -0.94
SCARNA20-201ENST00000516768 SNX22Q96L94 193 aa9.18□□□□□ -0.94
SCARNA20-201ENST00000516768 ZNF184Q99676 751 aaPredicted RBP9.18□□□□□ -0.94
SCARNA20-201ENST00000516768 MS4A7Q9GZW8 240 aaPredicted RBP9.18□□□□□ -0.94
SCARNA20-201ENST00000516768 ISYNA1Q9NPH2 558 aa9.18□□□□□ -0.94
SCARNA20-201ENST00000516768 GLS2Q9UI32 602 aa9.18□□□□□ -0.94
SCARNA20-201ENST00000516768 TRBV23-1A0A0A0MS06 115 aa9.17□□□□□ -0.94
SCARNA20-201ENST00000516768 A0A1W2PPK0 400 aa9.17□□□□□ -0.94
SCARNA20-201ENST00000516768 PIN1P1O15428 100 aa9.17□□□□□ -0.94
SCARNA20-201ENST00000516768 VENTXO95231 258 aa9.17□□□□□ -0.94
SCARNA20-201ENST00000516768 HAND1O96004 215 aa9.17□□□□□ -0.94
SCARNA20-201ENST00000516768 PRKACAP17612 351 aa9.17□□□□□ -0.94
SCARNA20-201ENST00000516768 DUSP1P28562 367 aa9.17□□□□□ -0.94
SCARNA20-201ENST00000516768 BDKRB2P30411 391 aa9.17□□□□□ -0.94
SCARNA20-201ENST00000516768 CAPZA1P52907 286 aa9.17□□□□□ -0.94
SCARNA20-201ENST00000516768 HILS1P60008 231 aa9.17□□□□□ -0.94
SCARNA20-201ENST00000516768 RPL31P62899 125 aaKnown RBP9.17□□□□□ -0.94
SCARNA20-201ENST00000516768 PPP3R1P63098 170 aa9.17□□□□□ -0.94
SCARNA20-201ENST00000516768 TPBGQ13641 420 aa9.17□□□□□ -0.94
SCARNA20-201ENST00000516768 MED22Q15528 200 aa9.17□□□□□ -0.94
SCARNA20-201ENST00000516768 ACSM3Q53FZ2 586 aa9.17□□□□□ -0.94
SCARNA20-201ENST00000516768 GPR157Q5UAW9 335 aa9.17□□□□□ -0.94
SCARNA20-201ENST00000516768 ELP2Q6IA86 826 aa9.17□□□□□ -0.94
SCARNA20-201ENST00000516768 METAP1DQ6UB28 335 aaPredicted RBP9.17□□□□□ -0.94
SCARNA20-201ENST00000516768 FIP1L1Q6UN15 594 aaKnown RBP9.17□□□□□ -0.94
SCARNA20-201ENST00000516768 C17orf107Q6ZR85 190 aa9.17□□□□□ -0.94
SCARNA20-201ENST00000516768 CMTM4Q8IZR5 234 aa9.17□□□□□ -0.94
SCARNA20-201ENST00000516768 BPIFB2Q8N4F0 458 aa9.17□□□□□ -0.94
SCARNA20-201ENST00000516768 C11orf42Q8N5U0 333 aa9.17□□□□□ -0.94
SCARNA20-201ENST00000516768 TMEM158Q8WZ71 300 aa9.17□□□□□ -0.94
SCARNA20-201ENST00000516768 DERL3Q96Q80 235 aa9.17□□□□□ -0.94
SCARNA20-201ENST00000516768 OR14A2Q96R54 314 aa9.17□□□□□ -0.94
SCARNA20-201ENST00000516768 GPER1Q99527 375 aa9.17□□□□□ -0.94
SCARNA20-201ENST00000516768 SUCNR1Q9BXA5 334 aa9.17□□□□□ -0.94
SCARNA20-201ENST00000516768 YTHDF1Q9BYJ9 559 aaKnown RBP9.17□□□□□ -0.94
SCARNA20-201ENST00000516768 CCDC90BQ9GZT6 254 aa9.17□□□□□ -0.94
SCARNA20-201ENST00000516768 PRDM13Q9H4Q3 707 aa9.17□□□□□ -0.94
SCARNA20-201ENST00000516768 Q9H521 79 aa9.17□□□□□ -0.94
SCARNA20-201ENST00000516768 UNKLQ9H9P5 680 aaKnown RBP9.17□□□□□ -0.94
SCARNA20-201ENST00000516768 ELL3Q9HB65 397 aaPredicted RBP9.17□□□□□ -0.94
SCARNA20-201ENST00000516768 C19orf12Q9NSK7 152 aa9.17□□□□□ -0.94
SCARNA20-201ENST00000516768 IL36RNQ9UBH0 155 aa9.17□□□□□ -0.94
SCARNA20-201ENST00000516768 CKLFQ9UBR5 152 aa9.17□□□□□ -0.94
SCARNA20-201ENST00000516768 FOXJ3Q9UPW0 622 aa9.17□□□□□ -0.94
SCARNA20-201ENST00000516768 TRAV8-7A0A075B6U6 113 aa9.16□□□□□ -0.94
SCARNA20-201ENST00000516768 IGHV3OR16-10A0A075B7F0 116 aa9.16□□□□□ -0.94
SCARNA20-201ENST00000516768 TRAV40A0A0B4J280 105 aa9.16□□□□□ -0.94
SCARNA20-201ENST00000516768 A0A0G2JK05 382 aa9.16□□□□□ -0.94
SCARNA20-201ENST00000516768 A0A1W2PQ09 198 aa9.16□□□□□ -0.94
SCARNA20-201ENST00000516768 TMEM82A0PJX8 343 aa9.16□□□□□ -0.94
SCARNA20-201ENST00000516768 M0R1W7 72 aa9.16□□□□□ -0.94
SCARNA20-201ENST00000516768 GABRPO00591 440 aa9.16□□□□□ -0.94
SCARNA20-201ENST00000516768 PSPNO60542 156 aa9.16□□□□□ -0.94
SCARNA20-201ENST00000516768 FSTP19883 344 aa9.16□□□□□ -0.94
SCARNA20-201ENST00000516768 PRTN3P24158 256 aa9.16□□□□□ -0.94
SCARNA20-201ENST00000516768 EEF1B2P24534 225 aaKnown RBP9.16□□□□□ -0.94
SCARNA20-201ENST00000516768 MAPK3P27361 379 aaPredicted RBP9.16□□□□□ -0.94
SCARNA20-201ENST00000516768 ZNF93P35789 620 aaPredicted RBP9.16□□□□□ -0.94
SCARNA20-201ENST00000516768 BMXP51813 675 aa9.16□□□□□ -0.94
SCARNA20-201ENST00000516768 SRSF2Q01130 221 aaKnown RBP9.16□□□□□ -0.94
SCARNA20-201ENST00000516768 VMO1Q7Z5L0 202 aa9.16□□□□□ -0.94
SCARNA20-201ENST00000516768 CDH26Q8IXH8 852 aa9.16□□□□□ -0.94
SCARNA20-201ENST00000516768 OR8H2Q8N162 312 aa9.16□□□□□ -0.94
SCARNA20-201ENST00000516768 ASCC1Q8N9N2 400 aaKnown RBP9.16□□□□□ -0.94
SCARNA20-201ENST00000516768 OR4M1Q8NGD0 313 aa9.16□□□□□ -0.94
SCARNA20-201ENST00000516768 TNFAIP8L1Q8WVP5 186 aa9.16□□□□□ -0.94
SCARNA20-201ENST00000516768 THRSPQ92748 146 aa9.16□□□□□ -0.94
SCARNA20-201ENST00000516768 TNFRSF14Q92956 283 aa9.16□□□□□ -0.94
SCARNA20-201ENST00000516768 JMJD8Q96S16 334 aa9.16□□□□□ -0.94
SCARNA20-201ENST00000516768 SLC6A7Q99884 636 aa9.16□□□□□ -0.94
SCARNA20-201ENST00000516768 METTL8Q9H825 291 aaKnown RBP9.16□□□□□ -0.94
SCARNA20-201ENST00000516768 ONECUT1Q9UBC0 465 aa9.16□□□□□ -0.94
SCARNA20-201ENST00000516768 BLOC1S6Q9UL45 172 aa9.16□□□□□ -0.94
SCARNA20-201ENST00000516768 GSTK1Q9Y2Q3 226 aa9.16□□□□□ -0.94
SCARNA20-201ENST00000516768 SOX21Q9Y651 276 aaPredicted RBP9.16□□□□□ -0.94
SCARNA20-201ENST00000516768 COL6A5A8TX70 2615 aa9.16□□□□□ -0.94
SCARNA20-201ENST00000516768 IGHV1-69DA0A0B4J2H0 117 aa9.15□□□□□ -0.94
SCARNA20-201ENST00000516768 A0A1W2PPH5 198 aa9.15□□□□□ -0.94
SCARNA20-201ENST00000516768 MRPS14O60783 128 aaKnown RBP9.15□□□□□ -0.94
SCARNA20-201ENST00000516768 SC5DO75845 299 aa9.15□□□□□ -0.94
SCARNA20-201ENST00000516768 RGS9O75916 674 aaPredicted RBP9.15□□□□□ -0.94
SCARNA20-201ENST00000516768 OR2H2O95918 312 aa9.15□□□□□ -0.94
SCARNA20-201ENST00000516768 IGHV1-69P01742 117 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms