RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 TRAPPC1Q9Y5R8 145 aa9.76□□□□□ -0.85
TRIM41-209ENST00000515834 C3orf85A0A1B0GTC6 90 aa9.76□□□□□ -0.85
TRIM41-209ENST00000515834 ID1P41134 155 aa9.76□□□□□ -0.85
TRIM41-209ENST00000515834 PDPNQ86YL7 162 aa9.76□□□□□ -0.85
TRIM41-209ENST00000515834 PARP11Q9NR21 331 aa9.76□□□□□ -0.85
TRIM41-209ENST00000515834 CES1P1Q9UKY3 287 aa9.76□□□□□ -0.85
TRIM41-209ENST00000515834 TPRP12270 2363 aaKnown RBP9.76□□□□□ -0.85
TRIM41-209ENST00000515834 MED19A0JLT2 244 aaPredicted RBP9.76□□□□□ -0.85
TRIM41-209ENST00000515834 PLPP3O14495 311 aa9.76□□□□□ -0.85
TRIM41-209ENST00000515834 LALBAP00709 142 aa9.76□□□□□ -0.85
TRIM41-209ENST00000515834 VWA1Q6PCB0 445 aa9.76□□□□□ -0.85
TRIM41-209ENST00000515834 SPICQ8N5J4 248 aa9.76□□□□□ -0.85
TRIM41-209ENST00000515834 TMEM116Q8NCL8 245 aa9.76□□□□□ -0.85
TRIM41-209ENST00000515834 SLC45A2Q9UMX9 530 aa9.76□□□□□ -0.85
TRIM41-209ENST00000515834 VIRMAQ69YN4 1812 aaKnown RBP9.76□□□□□ -0.85
TRIM41-209ENST00000515834 TMEM272A0A1B0GTI8 110 aa9.76□□□□□ -0.85
TRIM41-209ENST00000515834 RHBDL1O75783 438 aa9.76□□□□□ -0.85
TRIM41-209ENST00000515834 IGHA1P01876 353 aa9.76□□□□□ -0.85
TRIM41-209ENST00000515834 IGHA2P01877 340 aa9.76□□□□□ -0.85
TRIM41-209ENST00000515834 RPS4XP62701 263 aaKnown RBP9.76□□□□□ -0.85
TRIM41-209ENST00000515834 OR8I2Q8N0Y5 310 aa9.76□□□□□ -0.85
TRIM41-209ENST00000515834 PTP4A1Q93096 173 aa9.76□□□□□ -0.85
TRIM41-209ENST00000515834 VSTM2LQ96N03 204 aa9.76□□□□□ -0.85
TRIM41-209ENST00000515834 UBE2L6O14933 153 aa9.76□□□□□ -0.85
TRIM41-209ENST00000515834 PF4P02776 101 aa9.76□□□□□ -0.85
TRIM41-209ENST00000515834 CEBPDP49716 269 aaPredicted RBP9.76□□□□□ -0.85
TRIM41-209ENST00000515834 CAMPP49913 170 aa9.76□□□□□ -0.85
TRIM41-209ENST00000515834 LINC01555Q8NAE3 123 aa9.76□□□□□ -0.85
TRIM41-209ENST00000515834 OR4S2Q8NH73 311 aa9.76□□□□□ -0.85
TRIM41-209ENST00000515834 LILRB4Q8NHJ6 448 aa9.76□□□□□ -0.85
TRIM41-209ENST00000515834 Q8WTZ3 238 aa9.76□□□□□ -0.85
TRIM41-209ENST00000515834 GABARAPL3Q9BY60 117 aa9.76□□□□□ -0.85
TRIM41-209ENST00000515834 TEX50A0A1B0GTY4 177 aa9.75□□□□□ -0.85
TRIM41-209ENST00000515834 DLL1O00548 723 aa9.75□□□□□ -0.85
TRIM41-209ENST00000515834 BTG1P62324 171 aa9.75□□□□□ -0.85
TRIM41-209ENST00000515834 NSUN5P2Q63ZY6 315 aa9.75□□□□□ -0.85
TRIM41-209ENST00000515834 SLC16A12Q6ZSM3 486 aa9.75□□□□□ -0.85
TRIM41-209ENST00000515834 DNAJB12Q9NXW2 375 aaKnown RBP9.75□□□□□ -0.85
TRIM41-209ENST00000515834 ZNF629Q9UEG4 869 aaPredicted RBP9.75□□□□□ -0.85
TRIM41-209ENST00000515834 A0A1W2PNV4 684 aa9.75□□□□□ -0.85
TRIM41-209ENST00000515834 CCL3P10147 92 aa9.75□□□□□ -0.85
TRIM41-209ENST00000515834 PF4V1P10720 104 aa9.75□□□□□ -0.85
TRIM41-209ENST00000515834 MMDQ15546 238 aa9.75□□□□□ -0.85
TRIM41-209ENST00000515834 TOMM34Q15785 309 aaPredicted RBP9.75□□□□□ -0.85
TRIM41-209ENST00000515834 COMMD1Q8N668 190 aa9.75□□□□□ -0.85
TRIM41-209ENST00000515834 A0A0B4J2E0 115 aa9.75□□□□□ -0.85
TRIM41-209ENST00000515834 A0A1B0GX12 115 aa9.75□□□□□ -0.85
TRIM41-209ENST00000515834 CSN3P07498 182 aa9.75□□□□□ -0.85
TRIM41-209ENST00000515834 WDR74Q6RFH5 385 aaPredicted RBP9.75□□□□□ -0.85
TRIM41-209ENST00000515834 TMEM229BQ8NBD8 167 aa9.75□□□□□ -0.85
TRIM41-209ENST00000515834 ZCCHC14Q8WYQ9 949 aaKnown RBP9.75□□□□□ -0.85
TRIM41-209ENST00000515834 RD3LP0DJH9 198 aa9.75□□□□□ -0.85
TRIM41-209ENST00000515834 SELENOPP49908 381 aa9.75□□□□□ -0.85
TRIM41-209ENST00000515834 RAC3P60763 192 aa9.75□□□□□ -0.85
TRIM41-209ENST00000515834 LY6EQ16553 131 aa9.75□□□□□ -0.85
TRIM41-209ENST00000515834 SMUG1Q53HV7 270 aa9.75□□□□□ -0.85
TRIM41-209ENST00000515834 SLC25A40Q8TBP6 338 aa9.75□□□□□ -0.85
TRIM41-209ENST00000515834 TMEM174Q8WUU8 243 aa9.75□□□□□ -0.85
TRIM41-209ENST00000515834 OPN3Q9H1Y3 402 aaPredicted RBP9.75□□□□□ -0.85
TRIM41-209ENST00000515834 NAT8BQ9UHF3 227 aa9.75□□□□□ -0.85
TRIM41-209ENST00000515834 PLCH1Q4KWH8 1693 aa9.75□□□□□ -0.85
TRIM41-209ENST00000515834 A0A1W2PPE3 182 aa9.75□□□□□ -0.85
TRIM41-209ENST00000515834 CT62P0C5K7 136 aa9.75□□□□□ -0.85
TRIM41-209ENST00000515834 SLC35B1P78383 322 aa9.75□□□□□ -0.85
TRIM41-209ENST00000515834 ROM1Q03395 351 aa9.75□□□□□ -0.85
TRIM41-209ENST00000515834 DCAF10Q5QP82 559 aa9.75□□□□□ -0.85
TRIM41-209ENST00000515834 PIMREGQ9BSJ6 248 aa9.75□□□□□ -0.85
TRIM41-209ENST00000515834 OOEPA6NGQ2 149 aa9.74□□□□□ -0.85
TRIM41-209ENST00000515834 FGF8P55075 233 aaPredicted RBP9.74□□□□□ -0.85
TRIM41-209ENST00000515834 GTF2H5Q6ZYL4 71 aa9.74□□□□□ -0.85
TRIM41-209ENST00000515834 R3HDM4Q96D70 268 aa9.74□□□□□ -0.85
TRIM41-209ENST00000515834 SLC25A10Q9UBX3 287 aaPredicted RBP9.74□□□□□ -0.85
TRIM41-209ENST00000515834 NKX2-2O95096 273 aa9.74□□□□□ -0.85
TRIM41-209ENST00000515834 PNPP00491 289 aa9.74□□□□□ -0.85
TRIM41-209ENST00000515834 EPXP11678 715 aa9.74□□□□□ -0.85
TRIM41-209ENST00000515834 PTBP1P26599 531 aaKnown RBP eCLIP9.74□□□□□ -0.85
TRIM41-209ENST00000515834 CCL8P80075 99 aa9.74□□□□□ -0.85
TRIM41-209ENST00000515834 DHRS11Q6UWP2 260 aa9.74□□□□□ -0.85
TRIM41-209ENST00000515834 ADAMTS17Q8TE56 1095 aa9.74□□□□□ -0.85
TRIM41-209ENST00000515834 CCL19Q99731 98 aa9.74□□□□□ -0.85
TRIM41-209ENST00000515834 EDIL3O43854 480 aa9.74□□□□□ -0.85
TRIM41-209ENST00000515834 ZNF658BQ4V348 819 aaPredicted RBP9.74□□□□□ -0.85
TRIM41-209ENST00000515834 DUSP18Q8NEJ0 188 aa9.74□□□□□ -0.85
TRIM41-209ENST00000515834 CXorf58Q96LI9 332 aa9.74□□□□□ -0.85
TRIM41-209ENST00000515834 GPR137Q96N19 417 aa9.74□□□□□ -0.85
TRIM41-209ENST00000515834 MRPL37Q9BZE1 423 aaKnown RBP9.74□□□□□ -0.85
TRIM41-209ENST00000515834 ZNF552Q9H707 407 aaPredicted RBP9.74□□□□□ -0.85
TRIM41-209ENST00000515834 TNFRSF12AQ9NP84 129 aa9.74□□□□□ -0.85
TRIM41-209ENST00000515834 PAPPA2Q9BXP8 1791 aa9.74□□□□□ -0.85
TRIM41-209ENST00000515834 NKX2-8O15522 239 aa9.74□□□□□ -0.85
TRIM41-209ENST00000515834 PTHLHP12272 177 aa9.74□□□□□ -0.85
TRIM41-209ENST00000515834 ISL1P61371 349 aa9.74□□□□□ -0.85
TRIM41-209ENST00000515834 UBE2L3P68036 154 aaKnown RBP9.74□□□□□ -0.85
TRIM41-209ENST00000515834 TIAL1Q01085 375 aaKnown RBP eCLIP9.74□□□□□ -0.85
TRIM41-209ENST00000515834 ZBTB37Q5TC79 503 aa9.74□□□□□ -0.85
TRIM41-209ENST00000515834 FAM219BQ5XKK7 198 aa9.74□□□□□ -0.85
TRIM41-209ENST00000515834 DOLPP1Q86YN1 238 aa9.74□□□□□ -0.85
TRIM41-209ENST00000515834 VPS25Q9BRG1 176 aa9.74□□□□□ -0.85
TRIM41-209ENST00000515834 IGHV3OR16-10A0A075B7F0 116 aa9.74□□□□□ -0.85
TRIM41-209ENST00000515834 IGKV3D-11A0A0A0MRZ8 115 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms