RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, human

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNA-223	ENST00000515459	UNQ9370/PRO34162	Q6UXP9	181 aa		12.52	□□□□□ -0.41
LMNA-223	ENST00000515459		Q6ZSR3	168 aa		12.52	□□□□□ -0.41
LMNA-223	ENST00000515459	RTN4RL2	Q86UN3	420 aa		12.52	□□□□□ -0.41
LMNA-223	ENST00000515459	CHST6	Q9GZX3	395 aa		12.52	□□□□□ -0.41
LMNA-223	ENST00000515459	ZNF556	Q9HAH1	456 aa		12.52	□□□□□ -0.41
LMNA-223	ENST00000515459	PLEKHA1	Q9HB21	404 aa		12.52	□□□□□ -0.41
LMNA-223	ENST00000515459	SEBOX	Q9HB31	216 aa	Predicted RBP	12.52	□□□□□ -0.41
LMNA-223	ENST00000515459	OR52A1	Q9UKL2	312 aa		12.52	□□□□□ -0.41
LMNA-223	ENST00000515459	UBE2J1	Q9Y385	318 aa	Predicted RBP	12.52	□□□□□ -0.41
LMNA-223	ENST00000515459		R4GMQ9	66 aa		12.52	□□□□□ -0.41
LMNA-223	ENST00000515459	CCDC182	A6NF36	153 aa		12.51	□□□□□ -0.41
LMNA-223	ENST00000515459	GNGT2	O14610	69 aa		12.51	□□□□□ -0.41
LMNA-223	ENST00000515459	LMO1	P25800	156 aa		12.51	□□□□□ -0.41
LMNA-223	ENST00000515459	CEACAM3	P40198	252 aa		12.51	□□□□□ -0.41
LMNA-223	ENST00000515459	CXCR4	P61073	352 aa		12.51	□□□□□ -0.41
LMNA-223	ENST00000515459	DGCR2	P98153	550 aa		12.51	□□□□□ -0.41
LMNA-223	ENST00000515459	TRIM25	Q14258	630 aa	Known RBP	12.51	□□□□□ -0.41
LMNA-223	ENST00000515459	TMEM236	Q5W0B7	351 aa		12.51	□□□□□ -0.41
LMNA-223	ENST00000515459	ZNF322	Q6U7Q0	402 aa	Predicted RBP	12.51	□□□□□ -0.41
LMNA-223	ENST00000515459	TMEM179B	Q7Z7N9	219 aa		12.51	□□□□□ -0.41
LMNA-223	ENST00000515459	ENTHD1	Q8IYW4	607 aa		12.51	□□□□□ -0.41
LMNA-223	ENST00000515459	EMG1	Q92979	244 aa	Known RBP	12.51	□□□□□ -0.41
LMNA-223	ENST00000515459	CNN2	Q99439	309 aa	Known RBP	12.51	□□□□□ -0.41
LMNA-223	ENST00000515459	APOL4	Q9BPW4	351 aa		12.51	□□□□□ -0.41
LMNA-223	ENST00000515459	ZNF446	Q9NWS9	450 aa		12.51	□□□□□ -0.41
LMNA-223	ENST00000515459	HHLA2	Q9UM44	414 aa		12.51	□□□□□ -0.41
LMNA-223	ENST00000515459	PCDHGB5	Q9Y5G0	923 aa		12.51	□□□□□ -0.41
LMNA-223	ENST00000515459	SNX5	Q9Y5X3	404 aa		12.51	□□□□□ -0.41
LMNA-223	ENST00000515459	IGKV1-27	A0A075B6S5	117 aa		12.5	□□□□□ -0.41
LMNA-223	ENST00000515459	MGST3	O14880	152 aa		12.5	□□□□□ -0.41
LMNA-223	ENST00000515459	PSPN	O60542	156 aa		12.5	□□□□□ -0.41
LMNA-223	ENST00000515459	IGLV1-47	P01700	117 aa		12.5	□□□□□ -0.41
LMNA-223	ENST00000515459	ERP29	P30040	261 aa	Known RBP	12.5	□□□□□ -0.41
LMNA-223	ENST00000515459	SLC6A1	P30531	599 aa		12.5	□□□□□ -0.41
LMNA-223	ENST00000515459	FUT6	P51993	359 aa		12.5	□□□□□ -0.41
LMNA-223	ENST00000515459	RPL23A	P62750	156 aa	Known RBP	12.5	□□□□□ -0.41
LMNA-223	ENST00000515459	MS4A2	Q01362	244 aa		12.5	□□□□□ -0.41
LMNA-223	ENST00000515459	ZNF91	Q05481	1191 aa		12.5	□□□□□ -0.41
LMNA-223	ENST00000515459	UBE2V2	Q15819	145 aa		12.5	□□□□□ -0.41
LMNA-223	ENST00000515459	SNAPC1	Q16533	368 aa		12.5	□□□□□ -0.41
LMNA-223	ENST00000515459	PLEKHG7	Q6ZR37	379 aa		12.5	□□□□□ -0.41
LMNA-223	ENST00000515459	SLC25A26	Q70HW3	274 aa		12.5	□□□□□ -0.41
LMNA-223	ENST00000515459		Q8IYB0	196 aa		12.5	□□□□□ -0.41
LMNA-223	ENST00000515459	ARHGAP24	Q8N264	748 aa		12.5	□□□□□ -0.41
LMNA-223	ENST00000515459	CREB3L1	Q96BA8	519 aa		12.5	□□□□□ -0.41
LMNA-223	ENST00000515459	GAL3ST2	Q9H3Q3	398 aa		12.5	□□□□□ -0.41
LMNA-223	ENST00000515459	SLC25A19	Q9HC21	320 aa		12.5	□□□□□ -0.41
LMNA-223	ENST00000515459	IL36RN	Q9UBH0	155 aa		12.5	□□□□□ -0.41
LMNA-223	ENST00000515459	GLS2	Q9UI32	602 aa		12.5	□□□□□ -0.41
LMNA-223	ENST00000515459	NUDT19	A8MXV4	375 aa		12.49	□□□□□ -0.41
LMNA-223	ENST00000515459	MAGEB4	O15481	346 aa	Predicted RBP	12.49	□□□□□ -0.41
LMNA-223	ENST00000515459	CCL1	P22362	96 aa		12.49	□□□□□ -0.41
LMNA-223	ENST00000515459	CDK2	P24941	298 aa		12.49	□□□□□ -0.41
LMNA-223	ENST00000515459	MYCNOS	P40205	109 aa		12.49	□□□□□ -0.41
LMNA-223	ENST00000515459	MNAT1	P51948	309 aa		12.49	□□□□□ -0.41
LMNA-223	ENST00000515459	P2RX3	P56373	397 aa		12.49	□□□□□ -0.41
LMNA-223	ENST00000515459	PRAMEF5	Q5TYX0	476 aa		12.49	□□□□□ -0.41
LMNA-223	ENST00000515459	BAIAP2L2	Q6UXY1	529 aa		12.49	□□□□□ -0.41
LMNA-223	ENST00000515459	HEPN1	Q6WQI6	88 aa		12.49	□□□□□ -0.41
LMNA-223	ENST00000515459	C8orf86	Q6ZUL3	223 aa		12.49	□□□□□ -0.41
LMNA-223	ENST00000515459	OR2W3	Q7Z3T1	314 aa		12.49	□□□□□ -0.41
LMNA-223	ENST00000515459	ZNF329	Q86UD4	541 aa		12.49	□□□□□ -0.41
LMNA-223	ENST00000515459	BORCS8	Q96FH0	119 aa		12.49	□□□□□ -0.41
LMNA-223	ENST00000515459	MED4	Q9NPJ6	270 aa		12.49	□□□□□ -0.41
LMNA-223	ENST00000515459	TVP23B	Q9NYZ1	205 aa		12.49	□□□□□ -0.41
LMNA-223	ENST00000515459	TRGV10	A0A0A0MS01	117 aa		12.48	□□□□□ -0.41
LMNA-223	ENST00000515459	FAM172BP	A6NC97	362 aa		12.48	□□□□□ -0.41
LMNA-223	ENST00000515459		H0YHG0	523 aa		12.48	□□□□□ -0.41
LMNA-223	ENST00000515459	C3orf84	H3BNL1	204 aa		12.48	□□□□□ -0.41
LMNA-223	ENST00000515459	BUB1B-PAK6	H3BSN5	160 aa		12.48	□□□□□ -0.41
LMNA-223	ENST00000515459	TOR1A	O14656	332 aa		12.48	□□□□□ -0.41
LMNA-223	ENST00000515459	RAMP3	O60896	148 aa		12.48	□□□□□ -0.41
LMNA-223	ENST00000515459	GATB	O75879	557 aa	Known RBP	12.48	□□□□□ -0.41
LMNA-223	ENST00000515459	ANXA8	P13928	327 aa		12.48	□□□□□ -0.41
LMNA-223	ENST00000515459	DUSP1	P28562	367 aa		12.48	□□□□□ -0.41
LMNA-223	ENST00000515459	CD34	P28906	385 aa		12.48	□□□□□ -0.41
LMNA-223	ENST00000515459	MNDA	P41218	407 aa		12.48	□□□□□ -0.41
LMNA-223	ENST00000515459	HLA-DRB5	Q30154	266 aa		12.48	□□□□□ -0.41
LMNA-223	ENST00000515459	TPTE2P1	Q5T6R2	138 aa		12.48	□□□□□ -0.41
LMNA-223	ENST00000515459	CCDC144NL	Q6NUI1	221 aa		12.48	□□□□□ -0.41
LMNA-223	ENST00000515459	FAM58A	Q8N1B3	248 aa		12.48	□□□□□ -0.41
LMNA-223	ENST00000515459	CHPT1	Q8WUD6	406 aa		12.48	□□□□□ -0.41
LMNA-223	ENST00000515459	TFAP2C	Q92754	450 aa		12.48	□□□□□ -0.41
LMNA-223	ENST00000515459	LRGUK	Q96M69	825 aa		12.48	□□□□□ -0.41
LMNA-223	ENST00000515459	P2RX4	Q99571	388 aa		12.48	□□□□□ -0.41
LMNA-223	ENST00000515459	MNT	Q99583	582 aa		12.48	□□□□□ -0.41
LMNA-223	ENST00000515459	CHST5	Q9GZS9	411 aa		12.48	□□□□□ -0.41
LMNA-223	ENST00000515459	ZNF286A	Q9HBT8	521 aa		12.48	□□□□□ -0.41
LMNA-223	ENST00000515459	ZFP57	Q9NU63	452 aa		12.48	□□□□□ -0.41
LMNA-223	ENST00000515459	RBFOX1	Q9NWB1	397 aa	Known RBP	12.48	□□□□□ -0.41
LMNA-223	ENST00000515459	MOB4	Q9Y3A3	225 aa		12.48	□□□□□ -0.41
LMNA-223	ENST00000515459	HSPE1-MOB4	S4R3N1	261 aa		12.48	□□□□□ -0.41
LMNA-223	ENST00000515459	KIAA2026	Q5HYC2	2103 aa		12.47	□□□□□ -0.41
LMNA-223	ENST00000515459	FUOM	A2VDF0	154 aa		12.47	□□□□□ -0.41
LMNA-223	ENST00000515459	OOSP1	A8MZH6	123 aa		12.47	□□□□□ -0.41
LMNA-223	ENST00000515459	ZNF670-ZNF695	F2Z2N8	137 aa		12.47	□□□□□ -0.41
LMNA-223	ENST00000515459	SYT7	O43581	403 aa		12.47	□□□□□ -0.41
LMNA-223	ENST00000515459	ZFPL1	O95159	310 aa		12.47	□□□□□ -0.41
LMNA-223	ENST00000515459	CYB5A	P00167	134 aa		12.47	□□□□□ -0.41
LMNA-223	ENST00000515459	SERPINA3	P01011	423 aa		12.47	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms