RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 SPICQ8N5J4 248 aa17.55■□□□□ 0.4
LSM6-207ENST00000515311 AP3S1Q92572 193 aa17.55■□□□□ 0.4
LSM6-207ENST00000515311 PTX4Q96A99 478 aa17.55■□□□□ 0.4
LSM6-207ENST00000515311 TMEM246Q9BRR3 403 aa17.55■□□□□ 0.4
LSM6-207ENST00000515311 IL36RNQ9UBH0 155 aa17.55■□□□□ 0.4
LSM6-207ENST00000515311 OR5V1Q9UGF6 321 aa17.55■□□□□ 0.4
LSM6-207ENST00000515311 ZNF222Q9UK12 451 aa17.55■□□□□ 0.4
LSM6-207ENST00000515311 IGKV1D-17A0A075B6S4 117 aa17.54■□□□□ 0.4
LSM6-207ENST00000515311 A0A0B4J203 849 aa17.54■□□□□ 0.4
LSM6-207ENST00000515311 TMEM272A0A1B0GTI8 110 aa17.54■□□□□ 0.4
LSM6-207ENST00000515311 TNFRSF13BO14836 293 aaPredicted RBP17.54■□□□□ 0.4
LSM6-207ENST00000515311 ZNF182P17025 639 aaPredicted RBP17.54■□□□□ 0.4
LSM6-207ENST00000515311 RAB6AP20340 208 aa17.54■□□□□ 0.4
LSM6-207ENST00000515311 ATPAF1Q5TC12 328 aaPredicted RBP17.54■□□□□ 0.4
LSM6-207ENST00000515311 OR10K2Q6IF99 312 aa17.54■□□□□ 0.4
LSM6-207ENST00000515311 LGALS14Q8TCE9 139 aa17.54■□□□□ 0.4
LSM6-207ENST00000515311 ACOT12Q8WYK0 555 aa17.54■□□□□ 0.4
LSM6-207ENST00000515311 FAM46BQ96A09 425 aa17.54■□□□□ 0.4
LSM6-207ENST00000515311 TMEM59Q9BXS4 323 aa17.54■□□□□ 0.4
LSM6-207ENST00000515311 KCNK15Q9H427 330 aa17.54■□□□□ 0.4
LSM6-207ENST00000515311 BANF2Q9H503 90 aa17.54■□□□□ 0.4
LSM6-207ENST00000515311 GLS2Q9UI32 602 aa17.54■□□□□ 0.4
LSM6-207ENST00000515311 ST3GAL6Q9Y274 331 aa17.54■□□□□ 0.4
LSM6-207ENST00000515311 CSMD1Q96PZ7 3565 aa17.53■□□□□ 0.4
LSM6-207ENST00000515311 RFPL4AA6NLU0 287 aa17.53■□□□□ 0.4
LSM6-207ENST00000515311 RFPL4AL1F8VTS6 287 aa17.53■□□□□ 0.4
LSM6-207ENST00000515311 MPIG6BO95866 241 aa17.53■□□□□ 0.4
LSM6-207ENST00000515311 GYPAP02724 150 aa17.53■□□□□ 0.4
LSM6-207ENST00000515311 SNRPBP14678 240 aaKnown RBP17.53■□□□□ 0.4
LSM6-207ENST00000515311 CPT2P23786 658 aa17.53■□□□□ 0.4
LSM6-207ENST00000515311 PRDX2P32119 198 aa17.53■□□□□ 0.4
LSM6-207ENST00000515311 RPS27AP62979 156 aaKnown RBP17.53■□□□□ 0.4
LSM6-207ENST00000515311 PIGYQ3MUY2 71 aa17.53■□□□□ 0.4
LSM6-207ENST00000515311 OR5T2Q8NGG2 359 aa17.53■□□□□ 0.4
LSM6-207ENST00000515311 Q96M66 194 aa17.53■□□□□ 0.4
LSM6-207ENST00000515311 GAL3ST1Q99999 423 aa17.53■□□□□ 0.4
LSM6-207ENST00000515311 TM2D1Q9BX74 207 aa17.53■□□□□ 0.4
LSM6-207ENST00000515311 SELENOIQ9C0D9 397 aa17.53■□□□□ 0.4
LSM6-207ENST00000515311 KAAG1Q9UBP8 84 aa17.53■□□□□ 0.4
LSM6-207ENST00000515311 RAB22AQ9UL26 194 aa17.53■□□□□ 0.4
LSM6-207ENST00000515311 FAM90A10PA6NDY2 464 aa17.52■□□□□ 0.4
LSM6-207ENST00000515311 FAM90A18PA6NE21 464 aa17.52■□□□□ 0.4
LSM6-207ENST00000515311 FAM90A16PA6NEW6 464 aa17.52■□□□□ 0.4
LSM6-207ENST00000515311 FAM90A20PA6NIJ5 464 aa17.52■□□□□ 0.4
LSM6-207ENST00000515311 NKX6-3A6NJ46 265 aa17.52■□□□□ 0.4
LSM6-207ENST00000515311 FAM90A8PA6NJQ4 464 aa17.52■□□□□ 0.4
LSM6-207ENST00000515311 FAM90A7PA6NKC0 464 aa17.52■□□□□ 0.4
LSM6-207ENST00000515311 CEACAM18A8MTB9 384 aa17.52■□□□□ 0.4
LSM6-207ENST00000515311 FAM90A22PA8MWA6 464 aa17.52■□□□□ 0.4
LSM6-207ENST00000515311 FAM90A12PA8MX19 464 aa17.52■□□□□ 0.4
LSM6-207ENST00000515311 FAM90A5PA8MXJ8 464 aa17.52■□□□□ 0.4
LSM6-207ENST00000515311 FAM90A23PA8MXZ1 464 aa17.52■□□□□ 0.4
LSM6-207ENST00000515311 SH2D1BO14796 132 aa17.52■□□□□ 0.4
LSM6-207ENST00000515311 HAND1O96004 215 aa17.52■□□□□ 0.4
LSM6-207ENST00000515311 PAHP00439 452 aa17.52■□□□□ 0.4
LSM6-207ENST00000515311 FAM90A15PP0C7V4 464 aa17.52■□□□□ 0.4
LSM6-207ENST00000515311 FAM90A13PP0C7W8 464 aa17.52■□□□□ 0.4
LSM6-207ENST00000515311 FAM90A14PP0C7W9 464 aa17.52■□□□□ 0.4
LSM6-207ENST00000515311 FAM90A24PP0C7X0 464 aa17.52■□□□□ 0.4
LSM6-207ENST00000515311 FAM189A2Q15884 450 aa17.52■□□□□ 0.4
LSM6-207ENST00000515311 MPV17LQ2QL34 196 aa17.52■□□□□ 0.4
LSM6-207ENST00000515311 ZNF788Q6ZQV5 615 aa17.52■□□□□ 0.4
LSM6-207ENST00000515311 SDSLQ96GA7 329 aa17.52■□□□□ 0.4
LSM6-207ENST00000515311 URM1Q9BTM9 101 aaKnown RBP17.52■□□□□ 0.4
LSM6-207ENST00000515311 IFT22Q9H7X7 185 aa17.52■□□□□ 0.4
LSM6-207ENST00000515311 OR14J1Q9UGF5 321 aa17.52■□□□□ 0.4
LSM6-207ENST00000515311 SPATA2Q9UM82 520 aa17.52■□□□□ 0.4
LSM6-207ENST00000515311 GEMIN2O14893 280 aaKnown RBP17.51■□□□□ 0.39
LSM6-207ENST00000515311 SNU13P55769 128 aaKnown RBP17.51■□□□□ 0.39
LSM6-207ENST00000515311 SLC36A1Q7Z2H8 476 aa17.51■□□□□ 0.39
LSM6-207ENST00000515311 CD177Q8N6Q3 437 aa17.51■□□□□ 0.39
LSM6-207ENST00000515311 CHST4Q8NCG5 386 aa17.51■□□□□ 0.39
LSM6-207ENST00000515311 Q96MF0 132 aa17.51■□□□□ 0.39
LSM6-207ENST00000515311 LPAR5Q9H1C0 372 aa17.51■□□□□ 0.39
LSM6-207ENST00000515311 ZNF665Q9H7R5 613 aa17.51■□□□□ 0.39
LSM6-207ENST00000515311 MIOXQ9UGB7 285 aa17.51■□□□□ 0.39
LSM6-207ENST00000515311 H3BUI4 141 aa17.5■□□□□ 0.39
LSM6-207ENST00000515311 TMPRSS2O15393 492 aa17.5■□□□□ 0.39
LSM6-207ENST00000515311 CHRM2P08172 466 aa17.5■□□□□ 0.39
LSM6-207ENST00000515311 AMY2BP19961 511 aa17.5■□□□□ 0.39
LSM6-207ENST00000515311 DUSP1P28562 367 aa17.5■□□□□ 0.39
LSM6-207ENST00000515311 GABRA2P47869 451 aa17.5■□□□□ 0.39
LSM6-207ENST00000515311 IL13RA1P78552 427 aa17.5■□□□□ 0.39
LSM6-207ENST00000515311 IKZF1Q13422 519 aa17.5■□□□□ 0.39
LSM6-207ENST00000515311 Q6P435 159 aa17.5■□□□□ 0.39
LSM6-207ENST00000515311 MZT2AQ6P582 158 aa17.5■□□□□ 0.39
LSM6-207ENST00000515311 ZNF561Q8N587 486 aa17.5■□□□□ 0.39
LSM6-207ENST00000515311 FAM89BQ8N5H3 189 aa17.5■□□□□ 0.39
LSM6-207ENST00000515311 MED30Q96HR3 178 aa17.5■□□□□ 0.39
LSM6-207ENST00000515311 GAFA1Q96PS6 74 aa17.5■□□□□ 0.39
LSM6-207ENST00000515311 CCL13Q99616 98 aa17.5■□□□□ 0.39
LSM6-207ENST00000515311 SLIRPQ9GZT3 109 aaKnown RBP17.5■□□□□ 0.39
LSM6-207ENST00000515311 PATZ1Q9HBE1 687 aaKnown RBP17.5■□□□□ 0.39
LSM6-207ENST00000515311 PCDHB10Q9UN67 800 aa17.5■□□□□ 0.39
LSM6-207ENST00000515311 ITPR3Q14573 2671 aa17.5■□□□□ 0.39
LSM6-207ENST00000515311 MYO9AB2RTY4 2548 aa17.5■□□□□ 0.39
LSM6-207ENST00000515311 IGHV4-61A0A0C4DH41 118 aa17.49■□□□□ 0.39
LSM6-207ENST00000515311 F5H0A9 414 aaPredicted RBP17.49■□□□□ 0.39
LSM6-207ENST00000515311 DEGS1O15121 323 aa17.49■□□□□ 0.39
LSM6-207ENST00000515311 SIGLEC5O15389 551 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms