RNA–Protein interactions for RNA: ENST00000514705.5

TSPAN17-208, Transcript of tetraspanin 17, humanhuman

TSL 2

Gene TSPAN17, Length 4,445 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-208ENST00000514705 RBMXL1Q96E39 390 aaKnown RBP12.17□□□□□ -0.46
TSPAN17-208ENST00000514705 GNRHR2Q96P88 292 aa12.17□□□□□ -0.46
TSPAN17-208ENST00000514705 HTTP42858 3142 aa12.17□□□□□ -0.46
TSPAN17-208ENST00000514705 GEMIN2O14893 280 aaKnown RBP12.17□□□□□ -0.46
TSPAN17-208ENST00000514705 CLN5O75503 358 aa12.17□□□□□ -0.46
TSPAN17-208ENST00000514705 F10P00742 488 aa12.17□□□□□ -0.46
TSPAN17-208ENST00000514705 IFNA1P01562 189 aa12.17□□□□□ -0.46
TSPAN17-208ENST00000514705 SEC11BP0C7V7 166 aa12.17□□□□□ -0.46
TSPAN17-208ENST00000514705 B4GALT1P15291 398 aa12.17□□□□□ -0.46
TSPAN17-208ENST00000514705 MDKP21741 143 aaPredicted RBP12.17□□□□□ -0.46
TSPAN17-208ENST00000514705 SNCAP37840 140 aa12.17□□□□□ -0.46
TSPAN17-208ENST00000514705 DCDP81605 110 aaKnown RBP12.17□□□□□ -0.46
TSPAN17-208ENST00000514705 C1orf87Q8N0U7 546 aa12.17□□□□□ -0.46
TSPAN17-208ENST00000514705 LINC00469Q8N7U9 141 aa12.17□□□□□ -0.46
TSPAN17-208ENST00000514705 TVP23CQ96ET8 276 aa12.17□□□□□ -0.46
TSPAN17-208ENST00000514705 MESP1Q9BRJ9 268 aa12.17□□□□□ -0.46
TSPAN17-208ENST00000514705 PLK3Q9H4B4 646 aa12.17□□□□□ -0.46
TSPAN17-208ENST00000514705 GAPDHP04406 335 aaKnown RBP12.17□□□□□ -0.46
TSPAN17-208ENST00000514705 ACKR3P25106 362 aa12.17□□□□□ -0.46
TSPAN17-208ENST00000514705 NXPH1P58417 271 aa12.17□□□□□ -0.46
TSPAN17-208ENST00000514705 AGBL5Q8NDL9 886 aa12.17□□□□□ -0.46
TSPAN17-208ENST00000514705 ALKBH3Q96Q83 286 aaPredicted RBP12.17□□□□□ -0.46
TSPAN17-208ENST00000514705 CABLES2Q9BTV7 478 aa12.17□□□□□ -0.46
TSPAN17-208ENST00000514705 P2RY1P47900 373 aa12.16□□□□□ -0.46
TSPAN17-208ENST00000514705 SUPT4H1P63272 117 aaKnown RBP12.16□□□□□ -0.46
TSPAN17-208ENST00000514705 PIGYQ3MUY2 71 aa12.16□□□□□ -0.46
TSPAN17-208ENST00000514705 NSUN5P2Q63ZY6 315 aa12.16□□□□□ -0.46
TSPAN17-208ENST00000514705 AAED1Q7RTV5 226 aa12.16□□□□□ -0.46
TSPAN17-208ENST00000514705 OSR2Q8N2R0 312 aa12.16□□□□□ -0.46
TSPAN17-208ENST00000514705 IL22RA1Q8N6P7 574 aa12.16□□□□□ -0.46
TSPAN17-208ENST00000514705 HPSE2Q8WWQ2 592 aa12.16□□□□□ -0.46
TSPAN17-208ENST00000514705 ZNF845Q96IR2 970 aaPredicted RBP12.16□□□□□ -0.46
TSPAN17-208ENST00000514705 TMEM100Q9NV29 134 aa12.16□□□□□ -0.46
TSPAN17-208ENST00000514705 CACNA1DQ01668 2161 aa12.16□□□□□ -0.46
TSPAN17-208ENST00000514705 CCDC187A0A096LP49 1063 aa12.16□□□□□ -0.46
TSPAN17-208ENST00000514705 ADAM20O43506 726 aa12.16□□□□□ -0.46
TSPAN17-208ENST00000514705 RUNX1Q01196 453 aa12.16□□□□□ -0.46
TSPAN17-208ENST00000514705 OR52M1Q8NGK5 317 aa12.16□□□□□ -0.46
TSPAN17-208ENST00000514705 GUCD1Q96NT3 240 aa12.16□□□□□ -0.46
TSPAN17-208ENST00000514705 ZNF319Q9P2F9 582 aa12.16□□□□□ -0.46
TSPAN17-208ENST00000514705 MCTS1Q9ULC4 181 aaKnown RBP12.16□□□□□ -0.46
TSPAN17-208ENST00000514705 A0A0U1RQK1 487 aa12.16□□□□□ -0.46
TSPAN17-208ENST00000514705 TCN2P20062 427 aa12.16□□□□□ -0.46
TSPAN17-208ENST00000514705 ATP6V0CP27449 155 aa12.16□□□□□ -0.46
TSPAN17-208ENST00000514705 EIF1P41567 113 aaKnown RBP12.16□□□□□ -0.46
TSPAN17-208ENST00000514705 DLK1P80370 383 aa12.16□□□□□ -0.46
TSPAN17-208ENST00000514705 LIAT1Q6ZQX7 453 aa12.16□□□□□ -0.46
TSPAN17-208ENST00000514705 OIT3Q8WWZ8 545 aa12.16□□□□□ -0.46
TSPAN17-208ENST00000514705 FRZBQ92765 325 aa12.16□□□□□ -0.46
TSPAN17-208ENST00000514705 OSGIN2Q9Y236 505 aa12.16□□□□□ -0.46
TSPAN17-208ENST00000514705 PTRH2Q9Y3E5 179 aaKnown RBP12.16□□□□□ -0.46
TSPAN17-208ENST00000514705 LOC390937A0A1W2PQ73 354 aa12.15□□□□□ -0.46
TSPAN17-208ENST00000514705 NKX2-6A6NCS4 301 aa12.15□□□□□ -0.46
TSPAN17-208ENST00000514705 H0YL77 283 aa12.15□□□□□ -0.46
TSPAN17-208ENST00000514705 FBP1P09467 338 aa12.15□□□□□ -0.46
TSPAN17-208ENST00000514705 GLB1P16278 677 aa12.15□□□□□ -0.46
TSPAN17-208ENST00000514705 SRPXP78539 464 aa12.15□□□□□ -0.46
TSPAN17-208ENST00000514705 EWSR1Q01844 656 aaKnown RBP eCLIP12.15□□□□□ -0.46
TSPAN17-208ENST00000514705 ALKBH2Q6NS38 261 aa12.15□□□□□ -0.46
TSPAN17-208ENST00000514705 ZNF343Q6P1L6 599 aa12.15□□□□□ -0.46
TSPAN17-208ENST00000514705 BTNL8Q6UX41 500 aa12.15□□□□□ -0.46
TSPAN17-208ENST00000514705 SLC25A43Q8WUT9 341 aaPredicted RBP12.15□□□□□ -0.46
TSPAN17-208ENST00000514705 IAPPP10997 89 aa12.15□□□□□ -0.46
TSPAN17-208ENST00000514705 CSRP1P21291 193 aaKnown RBP12.15□□□□□ -0.46
TSPAN17-208ENST00000514705 MST1LQ2TV78 715 aa12.15□□□□□ -0.46
TSPAN17-208ENST00000514705 CDCP2Q5VXM1 449 aa12.15□□□□□ -0.46
TSPAN17-208ENST00000514705 RAB39BQ96DA2 213 aa12.15□□□□□ -0.46
TSPAN17-208ENST00000514705 RHOVQ96L33 236 aa12.15□□□□□ -0.46
TSPAN17-208ENST00000514705 PLEKHF2Q9H8W4 249 aa12.15□□□□□ -0.46
TSPAN17-208ENST00000514705 WDR87Q6ZQQ6 2873 aa12.15□□□□□ -0.46
TSPAN17-208ENST00000514705 IGHV1OR21-1A0A087WYE8 117 aa12.15□□□□□ -0.46
TSPAN17-208ENST00000514705 RAMP1O60894 148 aa12.15□□□□□ -0.46
TSPAN17-208ENST00000514705 UBE2V2Q15819 145 aa12.15□□□□□ -0.46
TSPAN17-208ENST00000514705 ZNF774Q6NX45 483 aa12.15□□□□□ -0.46
TSPAN17-208ENST00000514705 MRPL21Q7Z2W9 205 aaKnown RBP12.15□□□□□ -0.46
TSPAN17-208ENST00000514705 MCEMP1Q8IX19 187 aa12.15□□□□□ -0.46
TSPAN17-208ENST00000514705 GNPNAT1Q96EK6 184 aaPredicted RBP12.15□□□□□ -0.46
TSPAN17-208ENST00000514705 BSCL2Q96G97 398 aaPredicted RBP12.15□□□□□ -0.46
TSPAN17-208ENST00000514705 LURAP1Q96LR2 239 aa12.15□□□□□ -0.46
TSPAN17-208ENST00000514705 ESPL1Q14674 2120 aa12.15□□□□□ -0.46
TSPAN17-208ENST00000514705 KIF26AQ9ULI4 1882 aaPredicted RBP12.15□□□□□ -0.47
TSPAN17-208ENST00000514705 PDGFBP01127 241 aaPredicted RBP12.14□□□□□ -0.47
TSPAN17-208ENST00000514705 SUMO3P55854 103 aaPredicted RBP12.14□□□□□ -0.47
TSPAN17-208ENST00000514705 AADACL3Q5VUY0 350 aa12.14□□□□□ -0.47
TSPAN17-208ENST00000514705 YRDCQ86U90 279 aaKnown RBP12.14□□□□□ -0.47
TSPAN17-208ENST00000514705 MRPL41Q8IXM3 137 aaKnown RBP12.14□□□□□ -0.47
TSPAN17-208ENST00000514705 SLC35G3Q8N808 338 aa12.14□□□□□ -0.47
TSPAN17-208ENST00000514705 ZNF709Q8N972 641 aa12.14□□□□□ -0.47
TSPAN17-208ENST00000514705 CYYR1Q96J86 154 aa12.14□□□□□ -0.47
TSPAN17-208ENST00000514705 TMED3Q9Y3Q3 217 aa12.14□□□□□ -0.47
TSPAN17-208ENST00000514705 SVILO95425 2214 aa12.14□□□□□ -0.47
TSPAN17-208ENST00000514705 HMGB3O15347 200 aaKnown RBP12.14□□□□□ -0.47
TSPAN17-208ENST00000514705 FCGR3AP08637 254 aa12.14□□□□□ -0.47
TSPAN17-208ENST00000514705 AADACP22760 399 aa12.14□□□□□ -0.47
TSPAN17-208ENST00000514705 IL13RA2Q14627 380 aa12.14□□□□□ -0.47
TSPAN17-208ENST00000514705 OR8G2PQ6IF36 304 aa12.14□□□□□ -0.47
TSPAN17-208ENST00000514705 MKXQ8IYA7 352 aa12.14□□□□□ -0.47
TSPAN17-208ENST00000514705 CYB561D1Q8N8Q1 229 aa12.14□□□□□ -0.47
TSPAN17-208ENST00000514705 OR6X1Q8NH79 312 aa12.14□□□□□ -0.47
TSPAN17-208ENST00000514705 MRGPRFQ96AM1 343 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms