RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 SRRQ9GZT4 340 aa2.32□□□□□ -2.04
HMGCS1-207ENST00000514610 DSN1Q9H410 356 aa2.32□□□□□ -2.04
HMGCS1-207ENST00000514610 PRORYQ9H606 182 aa2.32□□□□□ -2.04
HMGCS1-207ENST00000514610 ACOT13Q9NPJ3 140 aa2.32□□□□□ -2.04
HMGCS1-207ENST00000514610 ASF1BQ9NVP2 202 aa2.32□□□□□ -2.04
HMGCS1-207ENST00000514610 TAC3Q9UHF0 121 aa2.32□□□□□ -2.04
HMGCS1-207ENST00000514610 PLXNB3Q9ULL4 1909 aa2.32□□□□□ -2.04
HMGCS1-207ENST00000514610 DYSFO75923 2080 aa2.31□□□□□ -2.04
HMGCS1-207ENST00000514610 K7EPK0 472 aa2.31□□□□□ -2.04
HMGCS1-207ENST00000514610 CD8AP01732 235 aa2.31□□□□□ -2.04
HMGCS1-207ENST00000514610 TRGV3P03979 118 aa2.31□□□□□ -2.04
HMGCS1-207ENST00000514610 HCP5Q6MZN7 132 aa2.31□□□□□ -2.04
HMGCS1-207ENST00000514610 LINC00596Q86U02 117 aa2.31□□□□□ -2.04
HMGCS1-207ENST00000514610 C22orf15Q8WYQ4 148 aa2.31□□□□□ -2.04
HMGCS1-207ENST00000514610 SYT4Q9H2B2 425 aa2.31□□□□□ -2.04
HMGCS1-207ENST00000514610 DUSP21Q9H596 190 aa2.31□□□□□ -2.04
HMGCS1-207ENST00000514610 BZW2Q9Y6E2 419 aaKnown RBP2.31□□□□□ -2.04
HMGCS1-207ENST00000514610 GMNCA6NCL1 334 aa2.3□□□□□ -2.04
HMGCS1-207ENST00000514610 FFAR1O14842 300 aa2.3□□□□□ -2.04
HMGCS1-207ENST00000514610 TCAPO15273 167 aa2.3□□□□□ -2.04
HMGCS1-207ENST00000514610 M6PRP20645 277 aa2.3□□□□□ -2.04
HMGCS1-207ENST00000514610 IMPA1P29218 277 aa2.3□□□□□ -2.04
HMGCS1-207ENST00000514610 HTR2BP41595 481 aa2.3□□□□□ -2.04
HMGCS1-207ENST00000514610 ENDOGQ14249 297 aaKnown RBP2.3□□□□□ -2.04
HMGCS1-207ENST00000514610 GUSBP1Q15486 140 aa2.3□□□□□ -2.04
HMGCS1-207ENST00000514610 Q499Y3 187 aa2.3□□□□□ -2.04
HMGCS1-207ENST00000514610 ACTL10Q5JWF8 245 aa2.3□□□□□ -2.04
HMGCS1-207ENST00000514610 ACTL9Q8TC94 416 aa2.3□□□□□ -2.04
HMGCS1-207ENST00000514610 SDHAF2Q9NX18 166 aa2.3□□□□□ -2.04
HMGCS1-207ENST00000514610 ICOSQ9Y6W8 199 aa2.3□□□□□ -2.04
HMGCS1-207ENST00000514610 ZBED9Q6R2W3 1325 aa2.3□□□□□ -2.04
HMGCS1-207ENST00000514610 ADAMTSL3P82987 1691 aa2.3□□□□□ -2.04
HMGCS1-207ENST00000514610 MIA3Q5JRA6 1907 aa2.29□□□□□ -2.04
HMGCS1-207ENST00000514610 GYG2O15488 501 aa2.29□□□□□ -2.04
HMGCS1-207ENST00000514610 CPSF4O95639 269 aaKnown RBP2.29□□□□□ -2.04
HMGCS1-207ENST00000514610 BGNP21810 368 aa2.29□□□□□ -2.04
HMGCS1-207ENST00000514610 NUDT2P50583 147 aa2.29□□□□□ -2.04
HMGCS1-207ENST00000514610 FOXA1P55317 472 aa2.29□□□□□ -2.04
HMGCS1-207ENST00000514610 ZNF141Q15928 474 aa2.29□□□□□ -2.04
HMGCS1-207ENST00000514610 PYDC2Q56P42 97 aa2.29□□□□□ -2.04
HMGCS1-207ENST00000514610 CLEC12AQ5QGZ9 265 aa2.29□□□□□ -2.04
HMGCS1-207ENST00000514610 FAHD1Q6P587 224 aa2.29□□□□□ -2.04
HMGCS1-207ENST00000514610 UGT2A3Q6UWM9 527 aa2.29□□□□□ -2.04
HMGCS1-207ENST00000514610 ZFP82Q8N141 532 aa2.29□□□□□ -2.04
HMGCS1-207ENST00000514610 CCL17Q92583 94 aa2.29□□□□□ -2.04
HMGCS1-207ENST00000514610 FMC1Q96HJ9 113 aa2.29□□□□□ -2.04
HMGCS1-207ENST00000514610 IGF2BP2-AS1Q96M15 143 aa2.29□□□□□ -2.04
HMGCS1-207ENST00000514610 SDHAF3Q9NRP4 125 aa2.29□□□□□ -2.04
HMGCS1-207ENST00000514610 VAPAQ9P0L0 249 aa2.29□□□□□ -2.04
HMGCS1-207ENST00000514610 ZNF780BQ9Y6R6 833 aa2.29□□□□□ -2.04
HMGCS1-207ENST00000514610 MROH5Q6ZUA9 1318 aa2.28□□□□□ -2.04
HMGCS1-207ENST00000514610 A0A1B0GXF2 115 aa2.28□□□□□ -2.04
HMGCS1-207ENST00000514610 RBFOX3A6NFN3 312 aa2.28□□□□□ -2.04
HMGCS1-207ENST00000514610 RGS5O15539 181 aa2.28□□□□□ -2.04
HMGCS1-207ENST00000514610 ENSAO43768 121 aaKnown RBP2.28□□□□□ -2.04
HMGCS1-207ENST00000514610 SLC37A4O43826 429 aa2.28□□□□□ -2.04
HMGCS1-207ENST00000514610 COX7A2P2O60397 106 aa2.28□□□□□ -2.04
HMGCS1-207ENST00000514610 IGHMP01871 453 aa2.28□□□□□ -2.04
HMGCS1-207ENST00000514610 DEKP35659 375 aaKnown RBP2.28□□□□□ -2.04
HMGCS1-207ENST00000514610 TGFBR2P37173 567 aa2.28□□□□□ -2.04
HMGCS1-207ENST00000514610 ATP6AP1LQ52LC2 224 aa2.28□□□□□ -2.04
HMGCS1-207ENST00000514610 USP50Q70EL3 339 aaPredicted RBP2.28□□□□□ -2.04
HMGCS1-207ENST00000514610 PAGE2Q7Z2X7 111 aa2.28□□□□□ -2.04
HMGCS1-207ENST00000514610 AMN1Q8IY45 258 aa2.28□□□□□ -2.04
HMGCS1-207ENST00000514610 OR51Q1Q8NH59 317 aa2.28□□□□□ -2.04
HMGCS1-207ENST00000514610 CLHC1Q8NHS4 586 aa2.28□□□□□ -2.04
HMGCS1-207ENST00000514610 DOK4Q8TEW6 326 aa2.28□□□□□ -2.04
HMGCS1-207ENST00000514610 ZCCHC13Q8WW36 166 aaKnown RBP2.28□□□□□ -2.04
HMGCS1-207ENST00000514610 CDKL2Q92772 493 aa2.28□□□□□ -2.04
HMGCS1-207ENST00000514610 LRRC39Q96DD0 335 aa2.28□□□□□ -2.04
HMGCS1-207ENST00000514610 ZNF436Q9C0F3 470 aaPredicted RBP2.28□□□□□ -2.04
HMGCS1-207ENST00000514610 POMKQ9H5K3 350 aa2.28□□□□□ -2.04
HMGCS1-207ENST00000514610 WDR55Q9H6Y2 383 aaPredicted RBP2.28□□□□□ -2.04
HMGCS1-207ENST00000514610 NLE1Q9NVX2 485 aaPredicted RBP2.28□□□□□ -2.04
HMGCS1-207ENST00000514610 IGHV3-43A0A0B4J1X8 118 aa2.27□□□□□ -2.05
HMGCS1-207ENST00000514610 ZNF729A6NN14 1252 aaPredicted RBP2.27□□□□□ -2.05
HMGCS1-207ENST00000514610 IGKV1D-33P01593 117 aa2.27□□□□□ -2.05
HMGCS1-207ENST00000514610 IGKV1-33P01594 117 aa2.27□□□□□ -2.05
HMGCS1-207ENST00000514610 CGB3P0DN86 165 aa2.27□□□□□ -2.05
HMGCS1-207ENST00000514610 CGB7P0DN87 165 aa2.27□□□□□ -2.05
HMGCS1-207ENST00000514610 PTHLHP12272 177 aa2.27□□□□□ -2.05
HMGCS1-207ENST00000514610 PRPS1L1P21108 318 aa2.27□□□□□ -2.05
HMGCS1-207ENST00000514610 KRTAP12-3P60328 96 aa2.27□□□□□ -2.05
HMGCS1-207ENST00000514610 C2orf80Q0P641 193 aa2.27□□□□□ -2.05
HMGCS1-207ENST00000514610 GPR176Q14439 515 aa2.27□□□□□ -2.05
HMGCS1-207ENST00000514610 TNXAQ16473 311 aa2.27□□□□□ -2.05
HMGCS1-207ENST00000514610 ACTBL2Q562R1 376 aa2.27□□□□□ -2.05
HMGCS1-207ENST00000514610 RESP18Q5W5W9 173 aa2.27□□□□□ -2.05
HMGCS1-207ENST00000514610 ZNF773Q6PK81 442 aa2.27□□□□□ -2.05
HMGCS1-207ENST00000514610 TPGS1Q6ZTW0 290 aa2.27□□□□□ -2.05
HMGCS1-207ENST00000514610 GALNT10Q86SR1 603 aa2.27□□□□□ -2.05
HMGCS1-207ENST00000514610 LY6G5BQ8NDX9 201 aa2.27□□□□□ -2.05
HMGCS1-207ENST00000514610 OR8A1Q8NGG7 326 aa2.27□□□□□ -2.05
HMGCS1-207ENST00000514610 OR6K2Q8NGY2 324 aa2.27□□□□□ -2.05
HMGCS1-207ENST00000514610 MUC7Q8TAX7 377 aa2.27□□□□□ -2.05
HMGCS1-207ENST00000514610 C2orf15Q8WU43 125 aaKnown RBP2.27□□□□□ -2.05
HMGCS1-207ENST00000514610 CIDECQ96AQ7 238 aaPredicted RBP2.27□□□□□ -2.05
HMGCS1-207ENST00000514610 ZNF396Q96N95 335 aaPredicted RBP2.27□□□□□ -2.05
HMGCS1-207ENST00000514610 VAT1Q99536 393 aa2.27□□□□□ -2.05
HMGCS1-207ENST00000514610 TXNIPQ9H3M7 391 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms