RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 ZNF93P35789 620 aaPredicted RBP11.53□□□□□ -0.56
USP46-209ENST00000514536 ARF6P62330 175 aa11.53□□□□□ -0.56
USP46-209ENST00000514536 COL10A1Q03692 680 aa11.53□□□□□ -0.56
USP46-209ENST00000514536 EMX1Q04741 257 aaPredicted RBP11.53□□□□□ -0.56
USP46-209ENST00000514536 MLLT11Q13015 90 aaPredicted RBP11.53□□□□□ -0.56
USP46-209ENST00000514536 TBCEQ15813 527 aaPredicted RBP11.53□□□□□ -0.56
USP46-209ENST00000514536 FIP1L1Q6UN15 594 aaKnown RBP11.53□□□□□ -0.56
USP46-209ENST00000514536 LY6G5BQ8NDX9 201 aa11.53□□□□□ -0.56
USP46-209ENST00000514536 TNFAIP8L1Q8WVP5 186 aa11.53□□□□□ -0.56
USP46-209ENST00000514536 TMEM203Q969S6 136 aa11.53□□□□□ -0.56
USP46-209ENST00000514536 HMG20AQ9NP66 347 aa11.53□□□□□ -0.56
USP46-209ENST00000514536 ACOT13Q9NPJ3 140 aa11.53□□□□□ -0.56
USP46-209ENST00000514536 ING4Q9UNL4 249 aa11.53□□□□□ -0.56
USP46-209ENST00000514536 GSTK1Q9Y2Q3 226 aa11.53□□□□□ -0.56
USP46-209ENST00000514536 LRRC42Q9Y546 428 aa11.53□□□□□ -0.56
USP46-209ENST00000514536 DOCK11Q5JSL3 2073 aa11.53□□□□□ -0.56
USP46-209ENST00000514536 MAGEA13PA6NCF6 341 aa11.52□□□□□ -0.57
USP46-209ENST00000514536 HAND1O96004 215 aa11.52□□□□□ -0.57
USP46-209ENST00000514536 MAS1P04201 325 aa11.52□□□□□ -0.57
USP46-209ENST00000514536 CPEP16870 476 aa11.52□□□□□ -0.57
USP46-209ENST00000514536 FSTP19883 344 aa11.52□□□□□ -0.57
USP46-209ENST00000514536 MAPK3P27361 379 aaPredicted RBP11.52□□□□□ -0.57
USP46-209ENST00000514536 PTGFRP43088 359 aa11.52□□□□□ -0.57
USP46-209ENST00000514536 OR3A4PP47883 348 aa11.52□□□□□ -0.57
USP46-209ENST00000514536 ARMCX4Q5H9R4 360 aa11.52□□□□□ -0.57
USP46-209ENST00000514536 KLF17Q5JT82 389 aaPredicted RBP11.52□□□□□ -0.57
USP46-209ENST00000514536 ZNF367Q7RTV3 350 aa11.52□□□□□ -0.57
USP46-209ENST00000514536 CEACAM19Q7Z692 300 aa11.52□□□□□ -0.57
USP46-209ENST00000514536 ASCC1Q8N9N2 400 aaKnown RBP11.52□□□□□ -0.57
USP46-209ENST00000514536 PXT1Q8NFP0 134 aa11.52□□□□□ -0.57
USP46-209ENST00000514536 THRSPQ92748 146 aa11.52□□□□□ -0.57
USP46-209ENST00000514536 PCGF1Q9BSM1 259 aa11.52□□□□□ -0.57
USP46-209ENST00000514536 FAM192AQ9GZU8 254 aa11.52□□□□□ -0.57
USP46-209ENST00000514536 IGHV3OR16-10A0A075B7F0 116 aa11.51□□□□□ -0.57
USP46-209ENST00000514536 K7N7A8 449 aa11.51□□□□□ -0.57
USP46-209ENST00000514536 TOX4O94842 621 aa11.51□□□□□ -0.57
USP46-209ENST00000514536 FSHBP01225 129 aa11.51□□□□□ -0.57
USP46-209ENST00000514536 TK1P04183 234 aa11.51□□□□□ -0.57
USP46-209ENST00000514536 RPS25P62851 125 aaKnown RBP11.51□□□□□ -0.57
USP46-209ENST00000514536 ZNF146Q15072 292 aa11.51□□□□□ -0.57
USP46-209ENST00000514536 RSU1Q15404 277 aa11.51□□□□□ -0.57
USP46-209ENST00000514536 FAM27D1Q5T7N8 215 aa11.51□□□□□ -0.57
USP46-209ENST00000514536 METTL11BQ5VVY1 283 aa11.51□□□□□ -0.57
USP46-209ENST00000514536 PHC2Q8IXK0 858 aa11.51□□□□□ -0.57
USP46-209ENST00000514536 SPARTQ8N0X7 666 aa11.51□□□□□ -0.57
USP46-209ENST00000514536 SVOPQ8N4V2 548 aa11.51□□□□□ -0.57
USP46-209ENST00000514536 OR10K1Q8NGX5 313 aa11.51□□□□□ -0.57
USP46-209ENST00000514536 C8orf46Q8TAG6 207 aa11.51□□□□□ -0.57
USP46-209ENST00000514536 UPRTQ96BW1 309 aa11.51□□□□□ -0.57
USP46-209ENST00000514536 SEBOXQ9HB31 216 aaPredicted RBP11.51□□□□□ -0.57
USP46-209ENST00000514536 RHOFQ9HBH0 211 aa11.51□□□□□ -0.57
USP46-209ENST00000514536 ONECUT1Q9UBC0 465 aa11.51□□□□□ -0.57
USP46-209ENST00000514536 GLS2Q9UI32 602 aa11.51□□□□□ -0.57
USP46-209ENST00000514536 A0A1W2PQ09 198 aa11.5□□□□□ -0.57
USP46-209ENST00000514536 TMEM82A0PJX8 343 aa11.5□□□□□ -0.57
USP46-209ENST00000514536 SH2D1BO14796 132 aa11.5□□□□□ -0.57
USP46-209ENST00000514536 ZNF737O75373 536 aa11.5□□□□□ -0.57
USP46-209ENST00000514536 CDRT1O95170 752 aa11.5□□□□□ -0.57
USP46-209ENST00000514536 HTR3BO95264 441 aa11.5□□□□□ -0.57
USP46-209ENST00000514536 EPHA1P21709 976 aa11.5□□□□□ -0.57
USP46-209ENST00000514536 GP2P55259 537 aaKnown RBP11.5□□□□□ -0.57
USP46-209ENST00000514536 SCN1BQ07699 218 aa11.5□□□□□ -0.57
USP46-209ENST00000514536 SPIN3Q5JUX0 258 aa11.5□□□□□ -0.57
USP46-209ENST00000514536 ASCL4Q6XD76 172 aa11.5□□□□□ -0.57
USP46-209ENST00000514536 OR4M1Q8NGD0 313 aa11.5□□□□□ -0.57
USP46-209ENST00000514536 SNX22Q96L94 193 aa11.5□□□□□ -0.57
USP46-209ENST00000514536 WDFY2Q96P53 400 aa11.5□□□□□ -0.57
USP46-209ENST00000514536 NR1H4Q96RI1 486 aaPredicted RBP11.5□□□□□ -0.57
USP46-209ENST00000514536 FAM234AQ9H0X4 552 aa11.5□□□□□ -0.57
USP46-209ENST00000514536 SIRPDQ9H106 197 aa11.5□□□□□ -0.57
USP46-209ENST00000514536 PPIL3Q9H2H8 161 aaKnown RBP11.5□□□□□ -0.57
USP46-209ENST00000514536 OCEL1Q9H607 264 aa11.5□□□□□ -0.57
USP46-209ENST00000514536 TCF7L1Q9HCS4 588 aa11.5□□□□□ -0.57
USP46-209ENST00000514536 C19orf12Q9NSK7 152 aa11.5□□□□□ -0.57
USP46-209ENST00000514536 NUP50Q9UKX7 468 aa11.5□□□□□ -0.57
USP46-209ENST00000514536 SF3B6Q9Y3B4 125 aaKnown RBP11.5□□□□□ -0.57
USP46-209ENST00000514536 SC5DO75845 299 aa11.5□□□□□ -0.57
USP46-209ENST00000514536 IGHV4-38-2P0DP08 117 aa11.5□□□□□ -0.57
USP46-209ENST00000514536 MMP9P14780 707 aa11.5□□□□□ -0.57
USP46-209ENST00000514536 GABRR1P24046 479 aa11.5□□□□□ -0.57
USP46-209ENST00000514536 MTNR1BP49286 362 aa11.5□□□□□ -0.57
USP46-209ENST00000514536 PDCD1Q15116 288 aa11.5□□□□□ -0.57
USP46-209ENST00000514536 TRAM1Q15629 374 aa11.5□□□□□ -0.57
USP46-209ENST00000514536 ELP2Q6IA86 826 aa11.5□□□□□ -0.57
USP46-209ENST00000514536 TMEM91Q6ZNR0 172 aa11.5□□□□□ -0.57
USP46-209ENST00000514536 C17orf107Q6ZR85 190 aa11.5□□□□□ -0.57
USP46-209ENST00000514536 FAM185AQ8N0U4 392 aa11.5□□□□□ -0.57
USP46-209ENST00000514536 JAGN1Q8N5M9 183 aa11.5□□□□□ -0.57
USP46-209ENST00000514536 C22orf15Q8WYQ4 148 aa11.5□□□□□ -0.57
USP46-209ENST00000514536 DMRTB1Q96MA1 342 aa11.5□□□□□ -0.57
USP46-209ENST00000514536 TBX15Q96SF7 602 aa11.5□□□□□ -0.57
USP46-209ENST00000514536 S100A13Q99584 98 aa11.5□□□□□ -0.57
USP46-209ENST00000514536 METTL9Q9H1A3 318 aa11.5□□□□□ -0.57
USP46-209ENST00000514536 EXOSC4Q9NPD3 245 aaKnown RBP11.5□□□□□ -0.57
USP46-209ENST00000514536 ZNF69Q9UC07 566 aa11.5□□□□□ -0.57
USP46-209ENST00000514536 MEGF11A6BM72 1044 aa11.49□□□□□ -0.57
USP46-209ENST00000514536 SIRPB1O00241 398 aa11.49□□□□□ -0.57
USP46-209ENST00000514536 PSPNO60542 156 aa11.49□□□□□ -0.57
USP46-209ENST00000514536 OR2H2O95918 312 aa11.49□□□□□ -0.57
USP46-209ENST00000514536 SRMP19623 302 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms