RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 MEOX1P50221 254 aa11.64□□□□□ -0.55
TCOF1-213ENST00000514442 HNRNPA3P51991 378 aaKnown RBP11.64□□□□□ -0.55
TCOF1-213ENST00000514442 ALKBH6Q3KRA9 238 aa11.64□□□□□ -0.55
TCOF1-213ENST00000514442 DHRS11Q6UWP2 260 aa11.64□□□□□ -0.55
TCOF1-213ENST00000514442 GCM1Q9NP62 436 aa11.64□□□□□ -0.55
TCOF1-213ENST00000514442 TRGV5A0A0B4J1U4 118 aa11.63□□□□□ -0.55
TCOF1-213ENST00000514442 CENPVL1A0A0U1RR11 272 aa11.63□□□□□ -0.55
TCOF1-213ENST00000514442 FOXS1O43638 330 aa11.63□□□□□ -0.55
TCOF1-213ENST00000514442 PNLIPRP3Q17RR3 467 aa11.63□□□□□ -0.55
TCOF1-213ENST00000514442 CLEC12BQ2HXU8 276 aa11.63□□□□□ -0.55
TCOF1-213ENST00000514442 SLC25A26Q70HW3 274 aa11.63□□□□□ -0.55
TCOF1-213ENST00000514442 CARFQ8N187 725 aa11.63□□□□□ -0.55
TCOF1-213ENST00000514442 C22orf15Q8WYQ4 148 aa11.63□□□□□ -0.55
TCOF1-213ENST00000514442 GPR61Q9BZJ8 451 aa11.63□□□□□ -0.55
TCOF1-213ENST00000514442 DUSP15Q9H1R2 295 aaPredicted RBP11.63□□□□□ -0.55
TCOF1-213ENST00000514442 NINQ8N4C6 2090 aa11.63□□□□□ -0.55
TCOF1-213ENST00000514442 LOC285556D6RIA3 1793 aa11.63□□□□□ -0.55
TCOF1-213ENST00000514442 ACTL6AO96019 429 aa11.63□□□□□ -0.55
TCOF1-213ENST00000514442 TMEM255AQ5JRV8 349 aa11.63□□□□□ -0.55
TCOF1-213ENST00000514442 SPINK14Q6IE38 97 aa11.63□□□□□ -0.55
TCOF1-213ENST00000514442 SIGLECL1Q8N7X8 197 aa11.63□□□□□ -0.55
TCOF1-213ENST00000514442 PTPMT1Q8WUK0 201 aaPredicted RBP11.63□□□□□ -0.55
TCOF1-213ENST00000514442 PLK3Q9H4B4 646 aa11.63□□□□□ -0.55
TCOF1-213ENST00000514442 SLCO1B1Q9Y6L6 691 aa11.63□□□□□ -0.55
TCOF1-213ENST00000514442 ANGPTL7O43827 346 aa11.63□□□□□ -0.55
TCOF1-213ENST00000514442 RCC1P18754 421 aaPredicted RBP11.63□□□□□ -0.55
TCOF1-213ENST00000514442 SLC25A1P53007 311 aa11.63□□□□□ -0.55
TCOF1-213ENST00000514442 PNRC1Q12796 327 aaPredicted RBP11.63□□□□□ -0.55
TCOF1-213ENST00000514442 DGAT2L6Q6ZPD8 337 aa11.63□□□□□ -0.55
TCOF1-213ENST00000514442 FAM58AQ8N1B3 248 aa11.63□□□□□ -0.55
TCOF1-213ENST00000514442 OR8U1Q8NH10 309 aa11.63□□□□□ -0.55
TCOF1-213ENST00000514442 C4orf45Q96LM5 186 aa11.63□□□□□ -0.55
TCOF1-213ENST00000514442 MYOFQ9NZM1 2061 aa11.63□□□□□ -0.55
TCOF1-213ENST00000514442 RPP30P78346 268 aaKnown RBP11.63□□□□□ -0.55
TCOF1-213ENST00000514442 EIF3IQ13347 325 aaKnown RBP11.63□□□□□ -0.55
TCOF1-213ENST00000514442 ENDOGQ14249 297 aaKnown RBP11.63□□□□□ -0.55
TCOF1-213ENST00000514442 SSPNQ14714 243 aa11.63□□□□□ -0.55
TCOF1-213ENST00000514442 CLEC18BQ6UXF7 455 aa11.63□□□□□ -0.55
TCOF1-213ENST00000514442 SCCPDHQ8NBX0 429 aa11.63□□□□□ -0.55
TCOF1-213ENST00000514442 NTNG2Q96CW9 530 aa11.63□□□□□ -0.55
TCOF1-213ENST00000514442 TRGV8A0A0C4DH27 118 aa11.62□□□□□ -0.55
TCOF1-213ENST00000514442 A0A0G2JK05 382 aa11.62□□□□□ -0.55
TCOF1-213ENST00000514442 GCGP01275 180 aa11.62□□□□□ -0.55
TCOF1-213ENST00000514442 GALR1P47211 349 aa11.62□□□□□ -0.55
TCOF1-213ENST00000514442 SLC37A1P57057 533 aa11.62□□□□□ -0.55
TCOF1-213ENST00000514442 C2orf68Q2NKX9 166 aa11.62□□□□□ -0.55
TCOF1-213ENST00000514442 LHFPL2Q6ZUX7 228 aa11.62□□□□□ -0.55
TCOF1-213ENST00000514442 ADAD2Q8NCV1 583 aaKnown RBP11.62□□□□□ -0.55
TCOF1-213ENST00000514442 RASL10BQ96S79 203 aa11.62□□□□□ -0.55
TCOF1-213ENST00000514442 FKBP11Q9NYL4 201 aa11.62□□□□□ -0.55
TCOF1-213ENST00000514442 KCNE5Q9UJ90 142 aa11.62□□□□□ -0.55
TCOF1-213ENST00000514442 RNF150Q9ULK6 438 aa11.62□□□□□ -0.55
TCOF1-213ENST00000514442 ATP23Q9Y6H3 246 aa11.62□□□□□ -0.55
TCOF1-213ENST00000514442 SEC16AO15027 2179 aa11.62□□□□□ -0.55
TCOF1-213ENST00000514442 CLDN1O95832 211 aa11.62□□□□□ -0.55
TCOF1-213ENST00000514442 TRGC2P03986 189 aa11.62□□□□□ -0.55
TCOF1-213ENST00000514442 CTLA4P16410 223 aa11.62□□□□□ -0.55
TCOF1-213ENST00000514442 HOXA5P20719 270 aa11.62□□□□□ -0.55
TCOF1-213ENST00000514442 OR10J1P30954 320 aa11.62□□□□□ -0.55
TCOF1-213ENST00000514442 LPAR6P43657 344 aa11.62□□□□□ -0.55
TCOF1-213ENST00000514442 EFNB2P52799 333 aa11.62□□□□□ -0.55
TCOF1-213ENST00000514442 KLHDC1Q8N7A1 406 aa11.62□□□□□ -0.55
TCOF1-213ENST00000514442 GVQW1Q8N7I0 195 aa11.62□□□□□ -0.55
TCOF1-213ENST00000514442 OR10A7Q8NGE5 316 aa11.62□□□□□ -0.55
TCOF1-213ENST00000514442 ADAMTS17Q8TE56 1095 aa11.62□□□□□ -0.55
TCOF1-213ENST00000514442 EXTL1Q92935 676 aa11.62□□□□□ -0.55
TCOF1-213ENST00000514442 RPUSD4Q96CM3 377 aaKnown RBP11.62□□□□□ -0.55
TCOF1-213ENST00000514442 ZNF764Q96H86 408 aaPredicted RBP11.62□□□□□ -0.55
TCOF1-213ENST00000514442 CMBLQ96DG6 245 aa11.62□□□□□ -0.55
TCOF1-213ENST00000514442 ARPC3O15145 178 aa11.62□□□□□ -0.55
TCOF1-213ENST00000514442 TOX3O15405 576 aaPredicted RBP11.62□□□□□ -0.55
TCOF1-213ENST00000514442 CD74P04233 296 aa11.62□□□□□ -0.55
TCOF1-213ENST00000514442 PRSS12P56730 875 aa11.62□□□□□ -0.55
TCOF1-213ENST00000514442 OR5I1Q13606 314 aa11.62□□□□□ -0.55
TCOF1-213ENST00000514442 SLC26A10Q8NG04 563 aa11.62□□□□□ -0.55
TCOF1-213ENST00000514442 OR10J5Q8NHC4 309 aa11.62□□□□□ -0.55
TCOF1-213ENST00000514442 SPSB2Q99619 263 aa11.62□□□□□ -0.55
TCOF1-213ENST00000514442 FAM103A1Q9BTL3 118 aaKnown RBP11.62□□□□□ -0.55
TCOF1-213ENST00000514442 SMDT1Q9H4I9 107 aa11.62□□□□□ -0.55
TCOF1-213ENST00000514442 PLEKHF2Q9H8W4 249 aa11.62□□□□□ -0.55
TCOF1-213ENST00000514442 TINAGQ9UJW2 476 aa11.62□□□□□ -0.55
TCOF1-213ENST00000514442 PCM1Q15154 2024 aa11.62□□□□□ -0.55
TCOF1-213ENST00000514442 SPINT2O43291 252 aa11.61□□□□□ -0.55
TCOF1-213ENST00000514442 SSSCA1O60232 199 aa11.61□□□□□ -0.55
TCOF1-213ENST00000514442 CRYAAP02489 173 aa11.61□□□□□ -0.55
TCOF1-213ENST00000514442 PATE4P0C8F1 98 aa11.61□□□□□ -0.55
TCOF1-213ENST00000514442 GLRA1P23415 457 aa11.61□□□□□ -0.55
TCOF1-213ENST00000514442 GALNSP34059 522 aa11.61□□□□□ -0.55
TCOF1-213ENST00000514442 TGIF1Q15583 401 aa11.61□□□□□ -0.55
TCOF1-213ENST00000514442 SLC38A9Q8NBW4 561 aa11.61□□□□□ -0.55
TCOF1-213ENST00000514442 OR10D3Q8NH80 312 aa11.61□□□□□ -0.55
TCOF1-213ENST00000514442 POC1BQ8TC44 478 aa11.61□□□□□ -0.55
TCOF1-213ENST00000514442 OSGIN2Q9Y236 505 aa11.61□□□□□ -0.55
TCOF1-213ENST00000514442 PMS2P1A4D2B8 440 aa11.61□□□□□ -0.55
TCOF1-213ENST00000514442 NKX6-3A6NJ46 265 aa11.61□□□□□ -0.55
TCOF1-213ENST00000514442 PLPP3O14495 311 aa11.61□□□□□ -0.55
TCOF1-213ENST00000514442 SEC11BP0C7V7 166 aa11.61□□□□□ -0.55
TCOF1-213ENST00000514442 MRGPREQ86SM8 312 aa11.61□□□□□ -0.55
TCOF1-213ENST00000514442 MCHR2Q969V1 340 aa11.61□□□□□ -0.55
TCOF1-213ENST00000514442 PRDM6Q9NQX0 595 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms