RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 MED30Q96HR3 178 aa16.84■□□□□ 0.29
USP53-208ENST00000514305 BCL7BQ9BQE9 202 aa16.84■□□□□ 0.29
USP53-208ENST00000514305 CST11Q9H112 138 aa16.84■□□□□ 0.29
USP53-208ENST00000514305 ANGPTL7O43827 346 aa16.83■□□□□ 0.28
USP53-208ENST00000514305 SRP14P37108 136 aaKnown RBP16.83■□□□□ 0.28
USP53-208ENST00000514305 OR3A4PP47883 348 aa16.83■□□□□ 0.28
USP53-208ENST00000514305 GMFBP60983 142 aa16.83■□□□□ 0.28
USP53-208ENST00000514305 ERVK11-1P61568 191 aa16.83■□□□□ 0.28
USP53-208ENST00000514305 FAM189A2Q15884 450 aa16.83■□□□□ 0.28
USP53-208ENST00000514305 SPIN3Q5JUX0 258 aa16.83■□□□□ 0.28
USP53-208ENST00000514305 GLIPR1L1Q6UWM5 242 aa16.83■□□□□ 0.28
USP53-208ENST00000514305 OR8B3Q8NGG8 313 aa16.83■□□□□ 0.28
USP53-208ENST00000514305 OR8B2Q96RD0 313 aa16.83■□□□□ 0.28
USP53-208ENST00000514305 TMEM246Q9BRR3 403 aa16.83■□□□□ 0.28
USP53-208ENST00000514305 C19orf24Q9BVV8 132 aa16.83■□□□□ 0.28
USP53-208ENST00000514305 SEBOXQ9HB31 216 aaPredicted RBP16.83■□□□□ 0.28
USP53-208ENST00000514305 HES4Q9HCC6 221 aa16.83■□□□□ 0.28
USP53-208ENST00000514305 TANC2Q9HCD6 1990 aa16.83■□□□□ 0.28
USP53-208ENST00000514305 DCAF16Q9NXF7 216 aa16.83■□□□□ 0.28
USP53-208ENST00000514305 OR2AT4A6NND4 320 aa16.82■□□□□ 0.28
USP53-208ENST00000514305 NOTOA8MTQ0 251 aa16.82■□□□□ 0.28
USP53-208ENST00000514305 SLC17A2O00624 439 aa16.82■□□□□ 0.28
USP53-208ENST00000514305 ZNF205O95201 554 aa16.82■□□□□ 0.28
USP53-208ENST00000514305 HTR3BO95264 441 aa16.82■□□□□ 0.28
USP53-208ENST00000514305 BPNT1O95861 308 aa16.82■□□□□ 0.28
USP53-208ENST00000514305 GTF2F2P13984 249 aa16.82■□□□□ 0.28
USP53-208ENST00000514305 PRKACAP17612 351 aa16.82■□□□□ 0.28
USP53-208ENST00000514305 ADRA2CP18825 462 aa16.82■□□□□ 0.28
USP53-208ENST00000514305 BCL3P20749 454 aa16.82■□□□□ 0.28
USP53-208ENST00000514305 NPY4RP50391 375 aa16.82■□□□□ 0.28
USP53-208ENST00000514305 RAB11BQ15907 218 aa16.82■□□□□ 0.28
USP53-208ENST00000514305 FAM201AQ5SY85 155 aa16.82■□□□□ 0.28
USP53-208ENST00000514305 ELP2Q6IA86 826 aa16.82■□□□□ 0.28
USP53-208ENST00000514305 PPP1R35Q8TAP8 253 aa16.82■□□□□ 0.28
USP53-208ENST00000514305 RAB2BQ8WUD1 216 aa16.82■□□□□ 0.28
USP53-208ENST00000514305 NEIL1Q96FI4 390 aaPredicted RBP16.82■□□□□ 0.28
USP53-208ENST00000514305 CENPOQ9BU64 300 aa16.82■□□□□ 0.28
USP53-208ENST00000514305 MRI1Q9BV20 369 aa16.82■□□□□ 0.28
USP53-208ENST00000514305 ZNF665Q9H7R5 613 aa16.82■□□□□ 0.28
USP53-208ENST00000514305 PATZ1Q9HBE1 687 aaKnown RBP16.82■□□□□ 0.28
USP53-208ENST00000514305 HMG20AQ9NP66 347 aa16.82■□□□□ 0.28
USP53-208ENST00000514305 B4DSR2 109 aa16.81■□□□□ 0.28
USP53-208ENST00000514305 SH2D1BO14796 132 aa16.81■□□□□ 0.28
USP53-208ENST00000514305 WNT9BO14905 357 aa16.81■□□□□ 0.28
USP53-208ENST00000514305 CDRT1O95170 752 aa16.81■□□□□ 0.28
USP53-208ENST00000514305 CHRM2P08172 466 aa16.81■□□□□ 0.28
USP53-208ENST00000514305 CD37P11049 281 aa16.81■□□□□ 0.28
USP53-208ENST00000514305 RPS2P15880 293 aaKnown RBP16.81■□□□□ 0.28
USP53-208ENST00000514305 EGR1P18146 543 aa16.81■□□□□ 0.28
USP53-208ENST00000514305 SDC2P34741 201 aa16.81■□□□□ 0.28
USP53-208ENST00000514305 GABRA2P47869 451 aa16.81■□□□□ 0.28
USP53-208ENST00000514305 DVL1P1P54792 670 aaPredicted RBP16.81■□□□□ 0.28
USP53-208ENST00000514305 TMBIM6P55061 237 aa16.81■□□□□ 0.28
USP53-208ENST00000514305 FGF12P61328 243 aa16.81■□□□□ 0.28
USP53-208ENST00000514305 DGUOKQ16854 277 aa16.81■□□□□ 0.28
USP53-208ENST00000514305 ATPAF1Q5TC12 328 aaPredicted RBP16.81■□□□□ 0.28
USP53-208ENST00000514305 LINC00596Q86U02 117 aa16.81■□□□□ 0.28
USP53-208ENST00000514305 GLCCI1Q86VQ1 547 aa16.81■□□□□ 0.28
USP53-208ENST00000514305 CLVS1Q8IUQ0 354 aaPredicted RBP16.81■□□□□ 0.28
USP53-208ENST00000514305 OSR2Q8N2R0 312 aa16.81■□□□□ 0.28
USP53-208ENST00000514305 C1orf159Q96HA4 380 aa16.81■□□□□ 0.28
USP53-208ENST00000514305 ZNF488Q96MN9 340 aa16.81■□□□□ 0.28
USP53-208ENST00000514305 WDR13Q9H1Z4 485 aa16.81■□□□□ 0.28
USP53-208ENST00000514305 NARFLQ9H6Q4 476 aa16.81■□□□□ 0.28
USP53-208ENST00000514305 KAAG1Q9UBP8 84 aa16.81■□□□□ 0.28
USP53-208ENST00000514305 STEAP1Q9UHE8 339 aa16.81■□□□□ 0.28
USP53-208ENST00000514305 CEACAM18A8MTB9 384 aa16.8■□□□□ 0.28
USP53-208ENST00000514305 SLC22A1O15245 554 aa16.8■□□□□ 0.28
USP53-208ENST00000514305 ADAM20O43506 726 aa16.8■□□□□ 0.28
USP53-208ENST00000514305 GABARAPO95166 117 aa16.8■□□□□ 0.28
USP53-208ENST00000514305 IL1AP01583 271 aa16.8■□□□□ 0.28
USP53-208ENST00000514305 GYPAP02724 150 aa16.8■□□□□ 0.28
USP53-208ENST00000514305 PSG2P11465 335 aa16.8■□□□□ 0.28
USP53-208ENST00000514305 ARSBP15848 533 aa16.8■□□□□ 0.28
USP53-208ENST00000514305 PRDX2P32119 198 aa16.8■□□□□ 0.28
USP53-208ENST00000514305 LSM3P62310 102 aaKnown RBP16.8■□□□□ 0.28
USP53-208ENST00000514305 SRSF2Q01130 221 aaKnown RBP16.8■□□□□ 0.28
USP53-208ENST00000514305 ZNF146Q15072 292 aa16.8■□□□□ 0.28
USP53-208ENST00000514305 C11orf91Q3C1V1 193 aa16.8■□□□□ 0.28
USP53-208ENST00000514305 SLC22A6Q4U2R8 563 aa16.8■□□□□ 0.28
USP53-208ENST00000514305 ESCO2Q56NI9 601 aa16.8■□□□□ 0.28
USP53-208ENST00000514305 STUMQ69YW2 141 aa16.8■□□□□ 0.28
USP53-208ENST00000514305 ZNF561Q8N587 486 aa16.8■□□□□ 0.28
USP53-208ENST00000514305 Q8NFD4 153 aa16.8■□□□□ 0.28
USP53-208ENST00000514305 CLDND2Q8NHS1 167 aa16.8■□□□□ 0.28
USP53-208ENST00000514305 KCNG3Q8TAE7 436 aa16.8■□□□□ 0.28
USP53-208ENST00000514305 RBFOX1Q9NWB1 397 aaKnown RBP16.8■□□□□ 0.28
USP53-208ENST00000514305 NDUFA13Q9P0J0 144 aa16.8■□□□□ 0.28
USP53-208ENST00000514305 IGHV3OR15-7A0A075B7D8 119 aa16.79■□□□□ 0.28
USP53-208ENST00000514305 IGKV1-12A0A0C4DH73 117 aa16.79■□□□□ 0.28
USP53-208ENST00000514305 RFPL4AA6NLU0 287 aa16.79■□□□□ 0.28
USP53-208ENST00000514305 IFITM5A6NNB3 132 aa16.79■□□□□ 0.28
USP53-208ENST00000514305 RFPL4AL1F8VTS6 287 aa16.79■□□□□ 0.28
USP53-208ENST00000514305 AIPO00170 330 aa16.79■□□□□ 0.28
USP53-208ENST00000514305 TMPRSS2O15393 492 aa16.79■□□□□ 0.28
USP53-208ENST00000514305 NDUFB3O43676 98 aa16.79■□□□□ 0.28
USP53-208ENST00000514305 TCF21O43680 179 aa16.79■□□□□ 0.28
USP53-208ENST00000514305 IGKV1D-12P01611 117 aa16.79■□□□□ 0.28
USP53-208ENST00000514305 SERPINA2P20848 420 aa16.79■□□□□ 0.28
USP53-208ENST00000514305 NPBWR2P48146 333 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms