RNA–Protein interactions for RNA: ENST00000513326.5

HTT-211, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 373 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-211ENST00000513326 ISOC1Q96CN7 298 aa3.73□□□□□ -1.81
HTT-211ENST00000513326 SRSF8Q9BRL6 282 aaKnown RBP3.73□□□□□ -1.81
HTT-211ENST00000513326 TM2D3Q9BRN9 247 aa3.73□□□□□ -1.81
HTT-211ENST00000513326 MCRIP2Q9BUT9 160 aaKnown RBP3.73□□□□□ -1.81
HTT-211ENST00000513326 HRH4Q9H3N8 390 aa3.73□□□□□ -1.81
HTT-211ENST00000513326 TMEM38AQ9H6F2 299 aa3.73□□□□□ -1.81
HTT-211ENST00000513326 MAGIXQ9H6Y5 334 aa3.73□□□□□ -1.81
HTT-211ENST00000513326 RMND5AQ9H871 391 aa3.73□□□□□ -1.81
HTT-211ENST00000513326 SP140LQ9H930 580 aa3.73□□□□□ -1.81
HTT-211ENST00000513326 RETNQ9HD89 108 aa3.73□□□□□ -1.81
HTT-211ENST00000513326 SDR39U1Q9NRG7 319 aaPredicted RBP3.73□□□□□ -1.81
HTT-211ENST00000513326 HAO2Q9NYQ3 351 aa3.73□□□□□ -1.81
HTT-211ENST00000513326 MRPL15Q9P015 296 aaKnown RBP3.73□□□□□ -1.81
HTT-211ENST00000513326 OR14J1Q9UGF5 321 aa3.73□□□□□ -1.81
HTT-211ENST00000513326 LINC00527Q9UJ94 153 aa3.73□□□□□ -1.81
HTT-211ENST00000513326 AURKCQ9UQB9 309 aa3.73□□□□□ -1.81
HTT-211ENST00000513326 POLR1DQ9Y2S0 133 aa3.73□□□□□ -1.81
HTT-211ENST00000513326 HILPDAQ9Y5L2 63 aa3.73□□□□□ -1.81
HTT-211ENST00000513326 IGLV1-36A0A0B4J1U3 117 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 PSMB11A5LHX3 300 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 FAM90A10PA6NDY2 464 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 CCL24O00175 119 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 BHLHE40O14503 412 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 OGG1O15527 345 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 GMDSO60547 372 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 MITFO75030 526 aaPredicted RBP3.72□□□□□ -1.81
HTT-211ENST00000513326 SERPINB7O75635 380 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 GAGE7O76087 117 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 ACAA1P09110 424 aaPredicted RBP3.72□□□□□ -1.81
HTT-211ENST00000513326 GAGE12FP0CL80 117 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 GAGE12GP0CL81 117 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 GAGE12IP0CL82 117 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 PIPP12273 146 aaPredicted RBP3.72□□□□□ -1.81
HTT-211ENST00000513326 NR2C1P13056 603 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 BDKRB2P30411 391 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 GGT2P36268 569 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 MYCNOSP40205 109 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 RBM34P42696 430 aaKnown RBP3.72□□□□□ -1.81
HTT-211ENST00000513326 GUCA1AP43080 201 aaPredicted RBP3.72□□□□□ -1.81
HTT-211ENST00000513326 GPR4P46093 362 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 GABRA2P47869 451 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 VEGFCP49767 419 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 SLC18A1P54219 525 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 CAV3P56539 151 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 MTPNP58546 118 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 TAS2R41P59536 307 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 LSM6P62312 80 aaKnown RBP3.72□□□□□ -1.81
HTT-211ENST00000513326 SLC34A1Q06495 639 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 GAGE1Q13065 139 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 GAGE4Q13068 117 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 KRR1Q13601 381 aaKnown RBP3.72□□□□□ -1.81
HTT-211ENST00000513326 ZNF260Q3ZCT1 412 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 KLHL12Q53G59 568 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 C9orf152Q5JTZ5 239 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 GPR139Q6DWJ6 353 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 TBPL2Q6SJ96 375 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 MSANTD1Q6ZTZ1 278 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 TCF23Q7RTU1 214 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 DPY19L4Q7Z388 723 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 FOXRED2Q8IWF2 684 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 NRMQ8IXM6 262 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 CD177Q8N6Q3 437 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 NEXN-AS1Q8NBZ9 246 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 OR51D1Q8NGF3 324 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 OR5K1Q8NHB7 308 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 GATAD1Q8WUU5 269 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 BPIFA2Q96DR5 249 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 PITX2Q99697 317 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 HDHD2Q9H0R4 259 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 TLNRD1Q9H1K6 362 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 FN3KQ9H479 309 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 YY1AP1Q9H869 796 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 RNPEPL1Q9HAU8 725 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 ABCB10Q9NRK6 738 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 VNN3Q9NY84 501 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 RHCGQ9UBD6 479 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 ATPIF1Q9UII2 106 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 RIMS3Q9UJD0 308 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 MED31Q9Y3C7 131 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 RHBDD3Q9Y3P4 386 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 N6AMT1Q9Y5N5 214 aa3.72□□□□□ -1.81
HTT-211ENST00000513326 MUC4Q99102 2169 aa3.71□□□□□ -1.82
HTT-211ENST00000513326 hDV102S1A0JD36 115 aa3.71□□□□□ -1.82
HTT-211ENST00000513326 OR2AT4A6NND4 320 aa3.71□□□□□ -1.82
HTT-211ENST00000513326 M0R135 149 aa3.71□□□□□ -1.82
HTT-211ENST00000513326 SPINT2O43291 252 aa3.71□□□□□ -1.82
HTT-211ENST00000513326 KHDRBS3O75525 346 aaKnown RBP3.71□□□□□ -1.82
HTT-211ENST00000513326 DEDDO75618 318 aa3.71□□□□□ -1.82
HTT-211ENST00000513326 ALDOBP05062 364 aa3.71□□□□□ -1.82
HTT-211ENST00000513326 CD14P08571 375 aa3.71□□□□□ -1.82
HTT-211ENST00000513326 PSG2P11465 335 aa3.71□□□□□ -1.82
HTT-211ENST00000513326 IDO1P14902 403 aa3.71□□□□□ -1.82
HTT-211ENST00000513326 ZNF823P16415 610 aa3.71□□□□□ -1.82
HTT-211ENST00000513326 GPX2P18283 190 aa3.71□□□□□ -1.82
HTT-211ENST00000513326 MDH1P40925 334 aaKnown RBP3.71□□□□□ -1.82
HTT-211ENST00000513326 CDKN2AP42771 156 aaKnown RBP3.71□□□□□ -1.82
HTT-211ENST00000513326 YAP1P46937 504 aaKnown RBP3.71□□□□□ -1.82
HTT-211ENST00000513326 OR3A4PP47883 348 aa3.71□□□□□ -1.82
HTT-211ENST00000513326 DYNLT3P51808 116 aa3.71□□□□□ -1.82
HTT-211ENST00000513326 SLC25A1P53007 311 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms