RNA–Protein interactions for RNA: ENST00000513248.1

NUP54-212, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-212ENST00000513248 A0A087WUU8 490 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 LYNX1G3V0Z9 82 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 GNGT2O14610 69 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 SGCEO43556 437 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 TIMM8AO60220 97 aaPredicted RBP2.9□□□□□ -1.95
NUP54-212ENST00000513248 SLC16A7O60669 478 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 CLN5O75503 358 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 DIRAS1O95057 198 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 LYPD3O95274 346 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 IGHV3-13P01766 116 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 FABP3P05413 133 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 CD14P08571 375 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 LYNX1P0DP58 116 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 ANPEPP15144 967 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 ZNF823P16415 610 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 MSR1P21757 451 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 STOMP27105 288 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 CRABP1P29762 137 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 HTR5AP47898 357 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 EVX1P49640 407 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 UCP2P55851 309 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 ERVS71-1P61550 626 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 PPP1CBP62140 327 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 PRKCDQ05655 676 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 FMODQ06828 376 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 CD300CQ08708 224 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 SCGB2A2Q13296 93 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 KRR1Q13601 381 aaKnown RBP2.9□□□□□ -1.95
NUP54-212ENST00000513248 HFEQ30201 348 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 SLC36A3Q495N2 470 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 SAMD4BQ5PRF9 694 aaKnown RBP2.9□□□□□ -1.95
NUP54-212ENST00000513248 C6orf52Q5T4I8 152 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 AVPI1Q5T686 147 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 LIPNQ5VXI9 398 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 TBPL2Q6SJ96 375 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 SMARCD3Q6STE5 483 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 SIGLEC15Q6ZMC9 328 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 C17orf107Q6ZR85 190 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 LRP11Q86VZ4 500 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 HIPK1Q86Z02 1210 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 ZDHHC21Q8IVQ6 265 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 DEFB107AQ8IZN7 70 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 PGAM4Q8N0Y7 254 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 ZNF786Q8N393 782 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 CLDN22Q8N7P3 220 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 ARIH2OSQ8N7S6 290 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 CCDC197Q8NCU1 140 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 OR52L1Q8NGH7 329 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 SLC25A40Q8TBP6 338 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 FANK1Q8TC84 345 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 GNPDA2Q8TDQ7 276 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 ST7LQ8TDW4 575 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 CHPT1Q8WUD6 406 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 TMEM158Q8WZ71 300 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 CCL17Q92583 94 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 RDH5Q92781 318 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 RAB1CQ92928 201 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 PYURFQ96I23 114 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 Q96M85 177 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 ERMAPQ96PL5 475 aaPredicted RBP2.9□□□□□ -1.95
NUP54-212ENST00000513248 TSPAN32Q96QS1 320 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 ZNF426Q9BUY5 554 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 ZNF416Q9BWM5 594 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 RSPO3Q9BXY4 272 aaPredicted RBP2.9□□□□□ -1.95
NUP54-212ENST00000513248 ANKRD19PQ9H560 264 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 NMNAT1Q9HAN9 279 aaPredicted RBP2.9□□□□□ -1.95
NUP54-212ENST00000513248 B3GNT2Q9NY97 397 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 PLEK2Q9NYT0 353 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 UBAP1Q9NZ09 502 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 IL20RAQ9UHF4 553 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 TIMM10BQ9Y5J6 103 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 N6AMT1Q9Y5N5 214 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 IER3IP1Q9Y5U9 82 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 PKDREJQ9NTG1 2253 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 CELSR1Q9NYQ6 3014 aa2.9□□□□□ -1.95
NUP54-212ENST00000513248 MED12LQ86YW9 2145 aa2.89□□□□□ -1.95
NUP54-212ENST00000513248 IGHV1-69-2A0A0G2JMI3 117 aa2.89□□□□□ -1.95
NUP54-212ENST00000513248 TMEM129A0AVI4 362 aa2.89□□□□□ -1.95
NUP54-212ENST00000513248 PRSS37A4D1T9 235 aa2.89□□□□□ -1.95
NUP54-212ENST00000513248 A8MXK9 166 aa2.89□□□□□ -1.95
NUP54-212ENST00000513248 B4DSR2 109 aa2.89□□□□□ -1.95
NUP54-212ENST00000513248 CLDN25C9JDP6 229 aa2.89□□□□□ -1.95
NUP54-212ENST00000513248 TNFRSF11BO00300 401 aa2.89□□□□□ -1.95
NUP54-212ENST00000513248 GLCEO94923 617 aa2.89□□□□□ -1.95
NUP54-212ENST00000513248 CCNB2O95067 398 aa2.89□□□□□ -1.95
NUP54-212ENST00000513248 SNAP29O95721 258 aa2.89□□□□□ -1.95
NUP54-212ENST00000513248 IGF2P01344 180 aa2.89□□□□□ -1.95
NUP54-212ENST00000513248 IGHMP01871 453 aa2.89□□□□□ -1.95
NUP54-212ENST00000513248 IGFBP1P08833 259 aaPredicted RBP2.89□□□□□ -1.95
NUP54-212ENST00000513248 CST2P09228 141 aa2.89□□□□□ -1.95
NUP54-212ENST00000513248 ZNF35P13682 527 aa2.89□□□□□ -1.95
NUP54-212ENST00000513248 HSD17B1P14061 328 aa2.89□□□□□ -1.95
NUP54-212ENST00000513248 AZU1P20160 251 aa2.89□□□□□ -1.95
NUP54-212ENST00000513248 BCL3P20749 454 aa2.89□□□□□ -1.95
NUP54-212ENST00000513248 COL8A2P25067 703 aa2.89□□□□□ -1.95
NUP54-212ENST00000513248 GGT2P36268 569 aa2.89□□□□□ -1.95
NUP54-212ENST00000513248 MAGEB1P43366 347 aa2.89□□□□□ -1.95
NUP54-212ENST00000513248 TMEM33P57088 247 aa2.89□□□□□ -1.95
NUP54-212ENST00000513248 CCL8P80075 99 aa2.89□□□□□ -1.95
NUP54-212ENST00000513248 TNFAIP6P98066 277 aaPredicted RBP2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms