RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 CLPXO76031 633 aa10.5□□□□□ -0.73
PDPN-210ENST00000513143 ZNF205O95201 554 aa10.5□□□□□ -0.73
PDPN-210ENST00000513143 APOA1P02647 267 aa10.5□□□□□ -0.73
PDPN-210ENST00000513143 FAM90A15PP0C7V4 464 aa10.5□□□□□ -0.73
PDPN-210ENST00000513143 FAM90A13PP0C7W8 464 aa10.5□□□□□ -0.73
PDPN-210ENST00000513143 FAM90A14PP0C7W9 464 aa10.5□□□□□ -0.73
PDPN-210ENST00000513143 FAM90A24PP0C7X0 464 aa10.5□□□□□ -0.73
PDPN-210ENST00000513143 BTG1P62324 171 aa10.5□□□□□ -0.73
PDPN-210ENST00000513143 FAM189A2Q15884 450 aa10.5□□□□□ -0.73
PDPN-210ENST00000513143 MICBQ29980 383 aa10.5□□□□□ -0.73
PDPN-210ENST00000513143 SPIN3Q5JUX0 258 aa10.5□□□□□ -0.73
PDPN-210ENST00000513143 UBE2NLQ5JXB2 153 aa10.5□□□□□ -0.73
PDPN-210ENST00000513143 SFRP4Q6FHJ7 346 aaPredicted RBP10.5□□□□□ -0.73
PDPN-210ENST00000513143 PEG10Q86TG7 708 aaKnown RBP10.5□□□□□ -0.73
PDPN-210ENST00000513143 LINC00596Q86U02 117 aa10.5□□□□□ -0.73
PDPN-210ENST00000513143 BIVMQ86UB2 503 aa10.5□□□□□ -0.73
PDPN-210ENST00000513143 LRRC75A-AS1Q8N1F1 130 aa10.5□□□□□ -0.73
PDPN-210ENST00000513143 ZNF525Q8N782 197 aa10.5□□□□□ -0.73
PDPN-210ENST00000513143 C19orf18Q8NEA5 215 aa10.5□□□□□ -0.73
PDPN-210ENST00000513143 RAB40AQ8WXH6 277 aa10.5□□□□□ -0.73
PDPN-210ENST00000513143 PERPQ96FX8 193 aa10.5□□□□□ -0.73
PDPN-210ENST00000513143 URM1Q9BTM9 101 aaKnown RBP10.5□□□□□ -0.73
PDPN-210ENST00000513143 MIXL1Q9H2W2 232 aa10.5□□□□□ -0.73
PDPN-210ENST00000513143 DNAJB11Q9UBS4 358 aa10.5□□□□□ -0.73
PDPN-210ENST00000513143 WIPI2Q9Y4P8 454 aa10.5□□□□□ -0.73
PDPN-210ENST00000513143 ITPR2Q14571 2701 aa10.49□□□□□ -0.73
PDPN-210ENST00000513143 IGKV1D-17A0A075B6S4 117 aa10.49□□□□□ -0.73
PDPN-210ENST00000513143 A0A0A6YYD4 124 aa10.49□□□□□ -0.73
PDPN-210ENST00000513143 METTL21EPA6NDL7 271 aa10.49□□□□□ -0.73
PDPN-210ENST00000513143 RFPL4AA6NLU0 287 aa10.49□□□□□ -0.73
PDPN-210ENST00000513143 RFPL4AL1F8VTS6 287 aa10.49□□□□□ -0.73
PDPN-210ENST00000513143 TNFRSF13BO14836 293 aaPredicted RBP10.49□□□□□ -0.73
PDPN-210ENST00000513143 GEMIN2O14893 280 aaKnown RBP10.49□□□□□ -0.73
PDPN-210ENST00000513143 RGS5O15539 181 aa10.49□□□□□ -0.73
PDPN-210ENST00000513143 IGHV2-70P01814 119 aa10.49□□□□□ -0.73
PDPN-210ENST00000513143 CHRM2P08172 466 aa10.49□□□□□ -0.73
PDPN-210ENST00000513143 CSF3P09919 207 aa10.49□□□□□ -0.73
PDPN-210ENST00000513143 PSG2P11465 335 aa10.49□□□□□ -0.73
PDPN-210ENST00000513143 ELK1P19419 428 aa10.49□□□□□ -0.73
PDPN-210ENST00000513143 CPT2P23786 658 aa10.49□□□□□ -0.73
PDPN-210ENST00000513143 GIFP27352 417 aa10.49□□□□□ -0.73
PDPN-210ENST00000513143 PDLIM4P50479 330 aa10.49□□□□□ -0.73
PDPN-210ENST00000513143 SNU13P55769 128 aaKnown RBP10.49□□□□□ -0.73
PDPN-210ENST00000513143 ZMYND11Q15326 602 aa10.49□□□□□ -0.73
PDPN-210ENST00000513143 TAF9Q16594 264 aa10.49□□□□□ -0.73
PDPN-210ENST00000513143 MPV17LQ2QL34 196 aa10.49□□□□□ -0.73
PDPN-210ENST00000513143 STUMQ69YW2 141 aa10.49□□□□□ -0.73
PDPN-210ENST00000513143 LRRC28Q86X40 367 aaPredicted RBP10.49□□□□□ -0.73
PDPN-210ENST00000513143 CMTM4Q8IZR5 234 aa10.49□□□□□ -0.73
PDPN-210ENST00000513143 DEFB108BQ8NET1 73 aa10.49□□□□□ -0.73
PDPN-210ENST00000513143 OR5T2Q8NGG2 359 aa10.49□□□□□ -0.73
PDPN-210ENST00000513143 ANGPTL6Q8NI99 470 aa10.49□□□□□ -0.73
PDPN-210ENST00000513143 RAB1CQ92928 201 aa10.49□□□□□ -0.73
PDPN-210ENST00000513143 TIMD4Q96H15 378 aa10.49□□□□□ -0.73
PDPN-210ENST00000513143 NICN1Q9BSH3 213 aa10.49□□□□□ -0.73
PDPN-210ENST00000513143 ATG5Q9H1Y0 275 aa10.49□□□□□ -0.73
PDPN-210ENST00000513143 IFT22Q9H7X7 185 aa10.49□□□□□ -0.73
PDPN-210ENST00000513143 TMEM165Q9HC07 324 aa10.49□□□□□ -0.73
PDPN-210ENST00000513143 PEX16Q9Y5Y5 336 aa10.49□□□□□ -0.73
PDPN-210ENST00000513143 CSMD2Q7Z408 3487 aa10.49□□□□□ -0.73
PDPN-210ENST00000513143 NAV2Q8IVL1 2488 aa10.48□□□□□ -0.73
PDPN-210ENST00000513143 FOXI3A8MTJ6 420 aaPredicted RBP10.48□□□□□ -0.73
PDPN-210ENST00000513143 RAB27BO00194 218 aa10.48□□□□□ -0.73
PDPN-210ENST00000513143 SH2D1BO14796 132 aa10.48□□□□□ -0.73
PDPN-210ENST00000513143 PPIHO43447 177 aaKnown RBP10.48□□□□□ -0.73
PDPN-210ENST00000513143 HAND1O96004 215 aa10.48□□□□□ -0.73
PDPN-210ENST00000513143 EIF4EP06730 217 aaKnown RBP10.48□□□□□ -0.73
PDPN-210ENST00000513143 AMY2BP19961 511 aa10.48□□□□□ -0.73
PDPN-210ENST00000513143 DUSP1P28562 367 aa10.48□□□□□ -0.73
PDPN-210ENST00000513143 PRDX2P32119 198 aa10.48□□□□□ -0.73
PDPN-210ENST00000513143 MDH2P40926 338 aaKnown RBP10.48□□□□□ -0.73
PDPN-210ENST00000513143 VEGFCP49767 419 aa10.48□□□□□ -0.73
PDPN-210ENST00000513143 KCNJ8Q15842 424 aa10.48□□□□□ -0.73
PDPN-210ENST00000513143 CARTPTQ16568 116 aa10.48□□□□□ -0.73
PDPN-210ENST00000513143 ATPAF1Q5TC12 328 aaPredicted RBP10.48□□□□□ -0.73
PDPN-210ENST00000513143 SIGIRRQ6IA17 410 aa10.48□□□□□ -0.73
PDPN-210ENST00000513143 Q6P435 159 aa10.48□□□□□ -0.73
PDPN-210ENST00000513143 DNM1P46Q6ZS02 220 aa10.48□□□□□ -0.73
PDPN-210ENST00000513143 LAX1Q8IWV1 398 aa10.48□□□□□ -0.73
PDPN-210ENST00000513143 CD177Q8N6Q3 437 aa10.48□□□□□ -0.73
PDPN-210ENST00000513143 OR56B1Q8NGI3 324 aa10.48□□□□□ -0.73
PDPN-210ENST00000513143 OR6Q1Q8NGQ2 317 aa10.48□□□□□ -0.73
PDPN-210ENST00000513143 S100A16Q96FQ6 103 aaKnown RBP10.48□□□□□ -0.73
PDPN-210ENST00000513143 WDFY2Q96P53 400 aa10.48□□□□□ -0.73
PDPN-210ENST00000513143 GAL3ST1Q99999 423 aa10.48□□□□□ -0.73
PDPN-210ENST00000513143 ZNF581Q9P0T4 197 aa10.48□□□□□ -0.73
PDPN-210ENST00000513143 OR14J1Q9UGF5 321 aa10.48□□□□□ -0.73
PDPN-210ENST00000513143 GLS2Q9UI32 602 aa10.48□□□□□ -0.73
PDPN-210ENST00000513143 ZNF222Q9UK12 451 aa10.48□□□□□ -0.73
PDPN-210ENST00000513143 ADAM30Q9UKF2 790 aa10.48□□□□□ -0.73
PDPN-210ENST00000513143 BAHCC1Q9P281 2608 aa10.48□□□□□ -0.73
PDPN-210ENST00000513143 DOCK11Q5JSL3 2073 aa10.47□□□□□ -0.73
PDPN-210ENST00000513143 A0A0A6YYH2 397 aa10.47□□□□□ -0.73
PDPN-210ENST00000513143 A6NJ64 397 aa10.47□□□□□ -0.73
PDPN-210ENST00000513143 H3BUI4 141 aa10.47□□□□□ -0.73
PDPN-210ENST00000513143 NDUFS8O00217 210 aa10.47□□□□□ -0.73
PDPN-210ENST00000513143 DEGS1O15121 323 aa10.47□□□□□ -0.73
PDPN-210ENST00000513143 SOCS1O15524 211 aa10.47□□□□□ -0.73
PDPN-210ENST00000513143 NDUFA2O43678 99 aa10.47□□□□□ -0.73
PDPN-210ENST00000513143 SCGNO76038 276 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms