RNA–Protein interactions for RNA: ENST00000513024.5

LIMCH1-218, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 1 (best) BASIC

Gene LIMCH1, Length 5,129 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-218ENST00000513024 A0A1B0GWB2 263 aa7.82□□□□□ -1.16
LIMCH1-218ENST00000513024 OR4C46A6NHA9 309 aa7.82□□□□□ -1.16
LIMCH1-218ENST00000513024 KCNAB3O43448 404 aa7.82□□□□□ -1.16
LIMCH1-218ENST00000513024 NXPH2O95156 264 aa7.82□□□□□ -1.16
LIMCH1-218ENST00000513024 SBK3P0C264 359 aa7.82□□□□□ -1.16
LIMCH1-218ENST00000513024 PGA4P0DJD7 388 aa7.82□□□□□ -1.16
LIMCH1-218ENST00000513024 PGA5P0DJD9 388 aa7.82□□□□□ -1.16
LIMCH1-218ENST00000513024 ADPRHP54922 357 aa7.82□□□□□ -1.16
LIMCH1-218ENST00000513024 KLF3P57682 345 aaPredicted RBP7.82□□□□□ -1.16
LIMCH1-218ENST00000513024 CDK5R1Q15078 307 aa7.82□□□□□ -1.16
LIMCH1-218ENST00000513024 DMRTC1Q5HYR2 192 aa7.82□□□□□ -1.16
LIMCH1-218ENST00000513024 AMMECR1LQ6DCA0 310 aa7.82□□□□□ -1.16
LIMCH1-218ENST00000513024 TMEM183AQ8IXX5 376 aa7.82□□□□□ -1.16
LIMCH1-218ENST00000513024 OR5C1Q8NGR4 320 aa7.82□□□□□ -1.16
LIMCH1-218ENST00000513024 OR51E1Q8TCB6 317 aa7.82□□□□□ -1.16
LIMCH1-218ENST00000513024 LCORQ96JN0 433 aaPredicted RBP7.82□□□□□ -1.16
LIMCH1-218ENST00000513024 ADAT1Q9BUB4 502 aaKnown RBP7.82□□□□□ -1.16
LIMCH1-218ENST00000513024 P2RY12Q9H244 342 aa7.82□□□□□ -1.16
LIMCH1-218ENST00000513024 SMDT1Q9H4I9 107 aa7.82□□□□□ -1.16
LIMCH1-218ENST00000513024 F5P12259 2224 aa7.82□□□□□ -1.16
LIMCH1-218ENST00000513024 SIGLEC5O15389 551 aa7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 IL3RAP26951 378 aa7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 CLEC18BQ6UXF7 455 aa7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 Q7L0L9 218 aa7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 OR8A1Q8NGG7 326 aa7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 ERGIC1Q969X5 290 aa7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 SPACA9Q96E40 222 aaPredicted RBP7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 SDF2Q99470 211 aa7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 S1PR3Q99500 378 aa7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 NKX6-3A6NJ46 265 aa7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 INHBBP09529 407 aa7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 PGA3P0DJD8 388 aa7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 CD40P25942 277 aa7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 GUCA2BQ16661 112 aa7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 RHBDD2Q6NTF9 364 aa7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 STAC2Q6ZMT1 411 aa7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 NUDT10Q8NFP7 164 aa7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 ASB5Q8WWX0 329 aa7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 SLC35A4Q96G79 324 aa7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 NRIP2Q9BQI9 281 aa7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 FGF21Q9NSA1 209 aa7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 SLC45A2Q9UMX9 530 aa7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 TIMM9Q9Y5J7 89 aa7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 LRRC3CA6NJW4 275 aa7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 WNT1P04628 370 aa7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 GP1BAP07359 652 aa7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 SLC35E2P0CK97 266 aa7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 CD1BP29016 333 aa7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 GUCA2AQ02747 115 aa7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 HERPUD1Q15011 391 aa7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 C1orf140Q5VVS0 124 aa7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 NHLRC1Q6VVB1 395 aa7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 LURAP1LQ8IV03 231 aa7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 CADM4Q8NFZ8 388 aa7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 NTMQ9P121 344 aa7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 VAX2Q9UIW0 290 aa7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 LSM2Q9Y333 95 aaKnown RBP7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 LY75O60449 1722 aa7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 SH2D7A6NKC9 451 aaPredicted RBP7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 ERVH48-1M5A8F1 160 aa7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 GALR2O43603 387 aaPredicted RBP7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 TMPRSS11DO60235 418 aa7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 IER3P46695 156 aa7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 RPL11P62913 178 aaKnown RBP7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 C1orf53Q5VUE5 145 aa7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 ARHGEF39Q8N4T4 335 aa7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 OR13C6PQ8NH95 151 aa7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 MEGF9Q9H1U4 602 aa7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 MANBALQ9NQG1 85 aa7.81□□□□□ -1.16
LIMCH1-218ENST00000513024 TRAV1-2A0A0B4J238 106 aa7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 A0A1W2PR48 441 aa7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 EDDM3BP56851 147 aa7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 RPL27P61353 136 aaKnown RBP7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 CSF3RQ99062 836 aa7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 MBNL1Q9NR56 388 aaKnown RBP7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 TECRQ9NZ01 308 aaKnown RBP7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 TMEFF2Q9UIK5 374 aaPredicted RBP7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 ANKRD31Q8N7Z5 1873 aa7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 NUP214P35658 2090 aaPredicted RBP7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 KIAA0100Q14667 2235 aaKnown RBP7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 ASXL3Q9C0F0 2248 aa7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 HS3ST1O14792 307 aa7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 SLC37A1P57057 533 aa7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 TMEM33P57088 247 aa7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 LSM11P83369 360 aaKnown RBP eCLIP7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 ERHP84090 104 aaKnown RBP7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 C17orf67Q0P5P2 114 aa7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 EDDM3AQ14507 147 aa7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 MPV17LQ2QL34 196 aa7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 ALKAL1Q6UXT8 129 aa7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 SSX8Q7RTT4 187 aa7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 WDFY1Q8IWB7 410 aa7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 RAB40CQ96S21 281 aa7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 CALHM2Q9HA72 323 aa7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 PARP11Q9NR21 331 aa7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 KIAA1217Q5T5P2 1943 aa7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 MED19A0JLT2 244 aaPredicted RBP7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 ORM1P02763 201 aa7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 HPXP02790 462 aa7.8□□□□□ -1.16
LIMCH1-218ENST00000513024 ZXDAP98168 799 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms